Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionDNA-binding transcription factor activity, RNA polymerase II-specific

HOXA5 HOXA9 HOXA10 HBP1 HOXB9 ZBTB38 HOXC9 BARX2 HOXD9 HOXD10

2.29e-0414123810GO:0000981
GeneOntologyMolecularFunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding

HOXA5 HOXA9 HOXA10 HBP1 HOXB9 ZBTB38 HOXC9 BARX2 HOXD9 HOXD10

2.99e-0414593810GO:0000977
GeneOntologyMolecularFunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding

HOXA5 HOXA9 HOXA10 HBP1 HOXB9 ZBTB38 HOXC9 HOXD9 HOXD10

4.32e-041244389GO:0000978
GeneOntologyMolecularFunctioncis-regulatory region sequence-specific DNA binding

HOXA5 HOXA9 HOXA10 HBP1 HOXB9 ZBTB38 HOXC9 HOXD9 HOXD10

5.05e-041271389GO:0000987
GeneOntologyBiologicalProcessproximal/distal pattern formation

HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

5.76e-1137386GO:0009954
GeneOntologyBiologicalProcessembryonic skeletal system morphogenesis

HOXA5 HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

4.56e-08109386GO:0048704
GeneOntologyBiologicalProcessembryonic skeletal system development

HOXA5 HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

2.82e-07148386GO:0048706
GeneOntologyBiologicalProcessanterior/posterior pattern specification

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

2.98e-07247387GO:0009952
GeneOntologyBiologicalProcessskeletal system morphogenesis

HOXA5 HOXA9 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

6.46e-07277387GO:0048705
GeneOntologyBiologicalProcessregionalization

HOXA5 HOXA9 HOXA10 HOXB9 EED HOXC9 HOXD9 HOXD10

2.08e-06478388GO:0003002
GeneOntologyBiologicalProcesspattern specification process

HOXA5 HOXA9 HOXA10 HOXB9 EED HOXC9 HOXD9 HOXD10

4.23e-06526388GO:0007389
GeneOntologyBiologicalProcessembryonic morphogenesis

HOXA5 HOXA9 HOXA10 MACF1 HOXB9 HOXC9 CPLANE1 HOXD9 HOXD10

4.44e-06713389GO:0048598
GeneOntologyBiologicalProcessembryonic limb morphogenesis

HOXA9 HOXA10 CPLANE1 HOXD9 HOXD10

7.37e-06148385GO:0030326
GeneOntologyBiologicalProcessembryonic appendage morphogenesis

HOXA9 HOXA10 CPLANE1 HOXD9 HOXD10

7.37e-06148385GO:0035113
GeneOntologyBiologicalProcessskeletal system development

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.32e-05615388GO:0001501
GeneOntologyBiologicalProcessappendage morphogenesis

HOXA9 HOXA10 CPLANE1 HOXD9 HOXD10

2.17e-05185385GO:0035107
GeneOntologyBiologicalProcesslimb morphogenesis

HOXA9 HOXA10 CPLANE1 HOXD9 HOXD10

2.17e-05185385GO:0035108
GeneOntologyBiologicalProcessembryonic organ morphogenesis

HOXA5 HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

4.06e-05351386GO:0048562
GeneOntologyBiologicalProcesslimb development

HOXA9 HOXA10 CPLANE1 HOXD9 HOXD10

5.41e-05224385GO:0060173
GeneOntologyBiologicalProcessappendage development

HOXA9 HOXA10 CPLANE1 HOXD9 HOXD10

5.41e-05224385GO:0048736
GeneOntologyBiologicalProcessforelimb morphogenesis

HOXA9 HOXD9 HOXD10

9.42e-0548383GO:0035136
GeneOntologyBiologicalProcessrRNA metabolic process

NOL7 WBP11 ERCC6 NSA2 DDX54

1.42e-04275385GO:0016072
GeneOntologyBiologicalProcessmammary gland development

HOXA5 HOXA9 HOXB9 HOXD9

2.20e-04162384GO:0030879
GeneOntologyBiologicalProcessperipheral nervous system neuron development

HOXD9 HOXD10

3.90e-0416382GO:0048935
GeneOntologyBiologicalProcessperipheral nervous system neuron differentiation

HOXD9 HOXD10

3.90e-0416382GO:0048934
GeneOntologyBiologicalProcessembryonic organ development

HOXA5 HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

5.19e-04561386GO:0048568
GeneOntologyBiologicalProcesssingle fertilization

HOXA9 HOXA10 HOXD9 HOXD10

5.77e-04209384GO:0007338
GeneOntologyBiologicalProcesspositive regulation of transcription by RNA polymerase II

HOXA5 HOXA9 HOXA10 HOXB9 ZBTB38 ERCC6 BARX2 HOXD9 HOXD10

7.65e-041390389GO:0045944
GeneOntologyBiologicalProcessrRNA processing

NOL7 WBP11 NSA2 DDX54

8.26e-04230384GO:0006364
GeneOntologyBiologicalProcessembryo development

HOXA5 HOXA9 HOXA10 MACF1 HOXB9 HOXC9 CPLANE1 HOXD9 HOXD10

9.70e-041437389GO:0009790
GeneOntologyBiologicalProcessfertilization

HOXA9 HOXA10 HOXD9 HOXD10

1.36e-03263384GO:0009566
GeneOntologyBiologicalProcessuterus development

HOXA9 HOXA10

1.39e-0330382GO:0060065
GeneOntologyCellularComponentchromatin

HOXA5 HOXA9 HOXA10 HBP1 HOXB9 EED HOXC9 ERCC6 BARX2 HOXD9 HOXD10

4.36e-0514803811GO:0000785
GeneOntologyCellularComponenttranscription regulator complex

HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD10

6.65e-04596386GO:0005667
MousePhenoabnormal vertebrae morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXB9 HOXC9 BARX2 CPLANE1 HOXD9 HOXD10 SMURF2

2.16e-095462711MP:0000137
MousePhenoabnormal vertebral column morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXB9 HOXC9 BARX2 CPLANE1 HOXD9 HOXD10 SMURF2 FAM221A

7.41e-097872712MP:0004703
MousePhenolumbar vertebral transformation

HOXA5 HOXA9 HOXA10 HOXC9 HOXD9

1.30e-0841275MP:0004616
MousePhenoincreased rib number

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9

1.66e-0843275MP:0000480
MousePhenoabnormal sternebra morphology

HOXA5 HOXA10 WBP11 HOXB9 CPLANE1

4.44e-0852275MP:0004322
MousePhenovertebral transformation

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9

5.35e-08110276MP:0003036
MousePhenoabnormal lumbar vertebrae morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXC9 HOXD9

8.57e-08119276MP:0003049
MousePhenoabnormal presacral vertebrae morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXC9 HOXD9

3.63e-06225276MP:0000459
MousePhenoabnormal sternocostal joint morphology

HOXA5 HOXA10 HOXB9 HOXC9

5.34e-0661274MP:0008148
MousePhenoabnormal axial skeleton morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXB9 HOXC9 BARX2 CPLANE1 HOXD9 HOXD10 SMURF2 FAM221A

6.17e-0614582712MP:0002114
MousePhenoabnormal sternum morphology

HOXA5 HOXA10 WBP11 HOXB9 HOXC9 CPLANE1

7.45e-06255276MP:0000157
MousePhenoabnormal joint morphology

HOXA5 HOXA10 WBP11 HOXB9 HOXC9 HOXD9 HOXD10

7.68e-06397277MP:0002932
MousePhenoabnormal rib morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXB9 HOXC9

7.80e-06257276MP:0000150
MousePhenoabnormal pectoral girdle bone morphology

HOXA5 HOXA10 WBP11 HOXB9 HOXC9 CPLANE1

1.92e-05301276MP:0004508
MousePhenoabnormal thoracic cage morphology

HOXA5 HOXA9 HOXA10 WBP11 HOXB9 HOXC9 CPLANE1

2.09e-05463277MP:0004624
MousePhenoabnormal rib joint morphology

HOXA5 HOXA10 HOXB9 HOXC9

2.10e-0586274MP:0004625
MousePhenoasymmetric sternocostal joints

HOXA5 HOXA10 HOXC9

2.79e-0531273MP:0008146
MousePhenoasymmetric rib joints

HOXA5 HOXA10 HOXC9

5.61e-0539273MP:0000155
MousePhenoabnormal synovial joint morphology

HOXA5 HOXA10 HOXB9 HOXC9

8.84e-05124274MP:0030804
MousePhenoabnormal appendicular skeleton morphology

HOXA5 HOXA10 WBP11 HOXB9 HOXC9 CPLANE1 HOXD9 HOXD10

2.05e-04896278MP:0009250
MousePhenoabnormal sternebra number

HOXA5 HOXA10

2.77e-0413272MP:0012282
MousePhenoabnormal vertebral transverse process morphology

WBP11 HOXD10

2.77e-0413272MP:0004600
MousePhenosacral vertebral fusion

HOXD9 HOXD10

2.77e-0413272MP:0004622
MousePhenoabnormal sacral vertebrae morphology

HOXA10 HOXD9 HOXD10

2.96e-0468273MP:0003050
MousePhenosacral vertebral transformation

HOXA10 HOXD9

4.24e-0416272MP:0004617
MousePhenosternebra fusion

HOXA5 WBP11

6.02e-0419272MP:0010082
MousePhenoabnormal thoracic vertebrae morphology

HOXA10 WBP11 HOXC9

1.12e-03107273MP:0003047
DomainHomeobox_metazoa

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

7.29e-1290378IPR020479
DomainHXA9/HXB9/HXC9

HOXA9 HOXB9 HOXC9 HOXD9

1.30e-114374IPR017112
DomainHox9_act

HOXA9 HOXB9 HOXC9 HOXD9

1.30e-114374PF04617
DomainHox9_activation_N

HOXA9 HOXB9 HOXC9 HOXD9

1.30e-114374IPR006711
DomainHomeobox_CS

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

2.51e-09186378IPR017970
Domain-

HOXA5 HOXA9 HOXA10 HOXB9 MSANTD4 HOXC9 BARX2 HOXD9 HOXD10

3.18e-092833791.10.10.60
DomainHomeodomain-like

HOXA5 HOXA9 HOXA10 HOXB9 MSANTD4 HOXC9 BARX2 HOXD9 HOXD10

1.28e-08332379IPR009057
DomainHomeobox

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.52e-08234378PF00046
DomainHOMEOBOX_1

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.62e-08236378PS00027
DomainHOX

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.68e-08237378SM00389
DomainHomeobox_dom

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.79e-08239378IPR001356
DomainHOMEOBOX_2

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.79e-08239378PS50071
DomainHTH_motif

HOXA9 HOXB9 HOXC9 BARX2 HOXD9

2.36e-0769375IPR000047
DomainWW

FNBP4 SMURF2

3.90e-0347372PF00397
DomainWW

FNBP4 SMURF2

4.07e-0348372SM00456
DomainWW_DOMAIN_2

FNBP4 SMURF2

4.58e-0351372PS50020
DomainWW_DOMAIN_1

FNBP4 SMURF2

4.58e-0351372PS01159
DomainWW_dom

FNBP4 SMURF2

4.76e-0352372IPR001202
DomainEF-hand_7

MACF1 SDF4

1.23e-0285372PF13499
Pubmed

A Hox Code Defines Spinocerebellar Neuron Subtype Regionalization.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.43e-171639731747609
Pubmed

Hox patterning of the vertebrate rib cage.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

2.43e-171739717626057
Pubmed

Sf3b4 regulates chromatin remodeler splicing and Hox expression.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

4.16e-153239737167859
Pubmed

Atlas of Hox gene expression in the developing kidney.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.55e-143839715042701
Pubmed

Complete mutation analysis panel of the 39 human HOX genes.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.55e-143839711857506
Pubmed

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.89e-143939733257809
Pubmed

Quantification of Hox and surfactant protein-B transcription during murine lung development.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

2.29e-144039719204410
Pubmed

Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

2.76e-144139732479258
Pubmed

Reduction of Hox gene expression by histone H1 depletion.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

3.94e-144339722701719
Pubmed

Nomenclature for human homeobox genes.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

4.69e-14443971973146
Pubmed

Vertebrate homeobox gene nomenclature.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

7.67e-14473971358459
Pubmed

New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.22e-135039728188179
Pubmed

The human HOX gene family.

HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

6.19e-13293962574852
Pubmed

A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

7.77e-1311839816971476
Pubmed

Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape.

HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

1.07e-121239527856734
Pubmed

Axial Hox9 activity establishes the posterior field in the developing forelimb.

HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

1.07e-121239521383175
Pubmed

Ndrg2 regulates vertebral specification in differentiating somites.

HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.18e-123239622819676
Pubmed

Global control of motor neuron topography mediated by the repressive actions of a single hox gene.

HOXA5 HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

2.52e-123639620826310
Pubmed

Hox genes and the evolution of vertebrate axial morphology.

HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

5.88e-12163957768176
Pubmed

Targeted disruption of the mouse homologue of the Drosophila polyhomeotic gene leads to altered anteroposterior patterning and neural crest defects.

HOXA5 HOXA9 HOXA10 HOXC9 HOXD9

5.68e-11243959367423
Pubmed

Fine mapping of human HOX gene clusters.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9

8.78e-11263958646877
Pubmed

Critical role of the p400/mDomino chromatin-remodeling ATPase in embryonic hematopoiesis.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9

2.68e-103239517535249
Pubmed

Recombineering-based dissection of flanking and paralogous Hox gene functions in mouse reproductive tracts.

HOXA9 HOXA10 HOXD9 HOXD10

4.43e-101139423760953
Pubmed

Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.

HOXA5 HOXA9 HOXB9 HOXC9 HOXD9

8.69e-104039528009287
Pubmed

Organization and expression of mouse Hox3 cluster genes.

HOXA5 HOXA9 HOXA10 HOXC9

1.34e-09143948099712
Pubmed

Altered transmission of HOX and apoptotic SNPs identify a potential common pathway for clubfoot.

HOXA5 HOXA9 HOXA10 HOXD9

1.83e-091539419938081
Pubmed

The emergent landscape of the mouse gut endoderm at single-cell resolution.

HOXA9 HOXA10 HOXB9 HOXC9 HOXD9

2.25e-094839530959515
Pubmed

Multiple enhancers regulate Hoxd genes and the Hotdog LncRNA during cecum budding.

HOXA9 HOXA10 HOXD9 HOXD10

3.18e-091739424075990
Pubmed

Gli3 and Plzf cooperate in proximal limb patterning at early stages of limb development.

HOXA9 HOXA10 HOXD9 HOXD10

4.08e-091839416015334
Pubmed

The HOX homeodomain proteins block CBP histone acetyltransferase activity.

HOXA9 HOXA10 HOXB9 HOXD10

4.08e-091839411585930
Pubmed

Shox2 regulates progression through chondrogenesis in the mouse proximal limb.

HOXA9 HOXA10 HOXD9 HOXD10

5.17e-091939423038774
Pubmed

Paralogous mouse Hox genes, Hoxa9, Hoxb9, and Hoxd9, function together to control development of the mammary gland in response to pregnancy.

HOXA9 HOXB9 HOXD9

5.21e-0943939892669
Pubmed

Organization of human class I homeobox genes.

HOXA5 HOXB9 HOXC9 HOXD10

9.73e-09223942576652
Pubmed

Pbx1/Pbx2 requirement for distal limb patterning is mediated by the hierarchical control of Hox gene spatial distribution and Shh expression.

HOXA9 HOXA10 HOXD9 HOXD10

1.18e-082339416672333
Pubmed

PRC2-Associated Chromatin Contacts in the Developing Limb Reveal a Possible Mechanism for the Atypical Role of PRC2 in HoxA Gene Expression.

HOXA9 HOXA10 EED

1.30e-08539331204170
Pubmed

An atlas of combinatorial transcriptional regulation in mouse and man.

HOXA5 HOXA9 HOXA10 HBP1 HOXB9 EED HOXC9 BARX2 HOXD9 HOXD10

3.24e-08877391020211142
Pubmed

A census of human transcription factors: function, expression and evolution.

HOXA5 HOXA9 HBP1 HOXB9 ZBTB38 HOXC9 BARX2 HOXD9 HOXD10 NOC3L

4.48e-08908391019274049
Pubmed

Hoxa10 mediates positional memory to govern stem cell function in adult skeletal muscle.

HOXA5 HOXA9 HOXA10

4.55e-08739334108202
Pubmed

Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning.

HOXA5 HOXB9 HOXC9 RPL41 HOXD10

7.71e-089639521529712
Pubmed

Impact of cytosine methylation on DNA binding specificities of human transcription factors.

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

1.37e-0754439828473536
Pubmed

Functional proteomics mapping of a human signaling pathway.

FNBP4 MACF1 SDF4 HBP1 ERCC6 CCDC181 ZDHHC3 SMURF2

2.57e-0759139815231748
Pubmed

Orientation of the Hoxa complex and placement of the Hd locus distal to Hoxa2 on mouse chromosome 6.

HOXA5 HOXA9 HOXA10

2.85e-07123938833244
Pubmed

Genomic maps and comparative analysis of histone modifications in human and mouse.

HOXA5 HOXA9 HOXA10

2.85e-071239315680324
Pubmed

Excessive versus physiologically relevant levels of retinoic acid in embryonic stem cell differentiation.

HOXA5 HOXA9 HOXA10

2.85e-071239325099890
Pubmed

The cell-cycle regulator geminin inhibits Hox function through direct and polycomb-mediated interactions.

HOXA10 HOXC9 HOXD10

3.70e-071339314973489
Pubmed

Hox gene function in vertebrate gut morphogenesis: the case of the caecum.

HOXA10 HOXD9 HOXD10

3.70e-071339317942481
Pubmed

Long-range regulation by shared retinoic acid response elements modulates dynamic expression of posterior Hoxb genes in CNS development.

HOXA5 HOXA9 HOXB9

3.70e-071339324525295
Pubmed

Identification of a Hoxd10-regulated transcriptional network and combinatorial interactions with Hoxa10 during spinal cord development.

HOXA10 HOXD9 HOXD10

7.23e-071639314743444
Pubmed

Recruitment of 5' Hoxa genes in the allantois is essential for proper extra-embryonic function in placental mammals.

HOXA5 HOXA9 HOXA10

7.23e-071639322219351
Pubmed

Nipbl and mediator cooperatively regulate gene expression to control limb development.

HOXC9 HOXD9 HOXD10

7.23e-071639325255084
Pubmed

Hoxc10 and Hoxd10 regulate mouse columnar, divisional and motor pool identity of lumbar motoneurons.

HOXA10 HOXD9 HOXD10

8.77e-071739318065432
Pubmed

The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.

MRPS5 LLPH NOL7 SDF4 NSA2 NOC3L DDX54

9.99e-0748339736912080
Pubmed

Growth disturbance in fetal liver hematopoiesis of Mll-mutant mice.

HOXA9 HOXA10 HOXC9

1.05e-06183939639506
Pubmed

Misexpression of Pknox2 in mouse limb bud mesenchyme perturbs zeugopod development and deltoid crest formation.

HOXA10 HOXD9 HOXD10

1.05e-061839323717575
Pubmed

Expression of homeobox genes, including an insulin promoting factor, in the murine yolk sac at the time of hematopoietic initiation.

HOXA9 HOXA10 HOXC9

1.05e-06183939291463
Pubmed

Geminin deletion increases the number of fetal hematopoietic stem cells by affecting the expression of key transcription factors.

HOXA5 HOXA9 HOXA10

1.05e-061839325516969
Pubmed

Mutually exclusive antiproliferative effect of cell line-specific HOX inhibition in epithelial ovarian cancer cell lines: SKOV-3 vs RMUG-S.

HOXA10 HOXB9

1.23e-06239231970886
Pubmed

Hoxa10 and Hoxd10 coordinately regulate lumbar motor neuron patterning.

HOXA10 HOXD10

1.23e-06239212918017
Pubmed

A long-range interactive DNA methylation marker panel for the promoters of HOXA9 and HOXA10 predicts survival in breast cancer patients.

HOXA9 HOXA10

1.23e-06239228748001
Pubmed

Aberrant Expression of HOXA5 and HOXA9 in AML.

HOXA5 HOXA9

1.23e-06239225987065
Pubmed

Loss of expression of the Hoxa-9 homeobox gene impairs the proliferation and repopulating ability of hematopoietic stem cells.

HOXA9 HOXA10

1.23e-06239216091451
Pubmed

Transcriptional induction of the mouse metallothionein-I gene in hydrogen peroxide-treated Hepa cells involves a composite major late transcription factor/antioxidant response element and metal response promoter elements.

HOXD9 HOXD10

1.23e-0623927800494
Pubmed

Specific and redundant functions of the paralogous Hoxa-9 and Hoxd-9 genes in forelimb and axial skeleton patterning.

HOXA9 HOXD9

1.23e-0623928625797
Pubmed

Expression of AbdB-type homeobox genes in human tumors.

HOXC9 HOXD10

1.23e-0623927967520
Pubmed

Cryptorchidism and homeotic transformations of spinal nerves and vertebrae in Hoxa-10 mutant mice.

HOXA9 HOXA10

1.23e-0623927667266
Pubmed

Two gene members of the murine HOX-5 complex show regional and cell-type specific expression in developing limbs and gonads.

HOXD9 HOXD10

1.23e-0623922569970
Pubmed

Homeobox A5 and A9 expression and beta-thalassemia.

HOXA5 HOXA9

1.23e-06239233461426
Pubmed

Comparison of mouse and human HOX-4 complexes defines conserved sequences involved in the regulation of Hox-4.4.

HOXD9 HOXD10

1.23e-0623921348690
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

FNBP4 MRPS5 LLPH NOL7 WBP11 NSA2 NOC3L DDX54

1.27e-0673139829298432
Pubmed

Evolutionarily conserved requirement of Cdx for post-occipital tissue emergence.

HOXA5 HOXA9 HOXB9

1.71e-062139322675207
Pubmed

Cdx is crucial for the timing mechanism driving colinear Hox activation and defines a trunk segment in the Hox cluster topology.

HOXA5 HOXA9 HOXB9

2.27e-062339328041967
Pubmed

Human transcription factor protein interaction networks.

HOXA5 HOXA10 MRPS5 LLPH WBP11 HOXB9 HOXC9 NSA2 NOC3L DDX54

2.84e-061429391035140242
Pubmed

Comprehensive Landscape of HOXA2, HOXA9, and HOXA10 as Potential Biomarkers for Predicting Progression and Prognosis in Prostate Cancer.

HOXA9 HOXA10

3.67e-06339235372588
Pubmed

The paralogous Hox genes Hoxa10 and Hoxd10 interact to pattern the mouse hindlimb peripheral nervous system and skeleton.

HOXA10 HOXD10

3.67e-06339211180954
Pubmed

The expression pattern of the murine Hoxa-10 gene and the sequence recognition of its homeodomain reveal specific properties of Abdominal B-like genes.

HOXA9 HOXA10

3.67e-0633927862151
Pubmed

The Abd-B-like Hox homeodomain proteins can be subdivided by the ability to form complexes with Pbx1a on a novel DNA target.

HOXA10 HOXB9

3.67e-0633929079637
Pubmed

Gene- and Species-Specific Hox mRNA Translation by Ribosome Expansion Segments.

HOXA5 HOXA9

3.67e-06339233202249
Pubmed

Dinucleotide repeats in the mouse Hox-4.4 and Hox-4.5 genes on chromosome 2, and their analysis in the BXD and BXH recombinant inbred strains.

HOXD9 HOXD10

3.67e-0633928094302
Pubmed

Functional cooperation between the non-paralogous genes Hoxa-10 and Hoxd-11 in the developing forelimb and axial skeleton.

HOXA10 HOXD10

3.67e-0633928625796
Pubmed

Setbp1 promotes the self-renewal of murine myeloid progenitors via activation of Hoxa9 and Hoxa10.

HOXA9 HOXA10

3.67e-06339222566606
Pubmed

Sexually dimorphic sterility phenotypes in Hoxa10-deficient mice.

HOXA9 HOXA10

3.67e-0633927700356
Pubmed

Structural basis for homeodomain recognition by the cell-cycle regulator Geminin.

HOXC9 HOXD10

3.67e-06339222615398
Pubmed

Targeted disruption of Hoxd9 and Hoxd10 alters locomotor behavior, vertebral identity, and peripheral nervous system development.

HOXD9 HOXD10

3.67e-06339210642795
Pubmed

Gene expression signatures for HOXA4, HOXA9, and HOXD10 reveal alterations in transcriptional regulatory networks in colon cancer.

HOXA9 HOXD10

3.67e-06339230552679
Pubmed

Anteroposterior Limb Skeletal Patterning Requires the Bifunctional Action of SWI/SNF Chromatin Remodeling Complex in Hedgehog Pathway.

HOXA9 HOXD9 HOXD10

4.67e-062939326959361
Pubmed

Functional proteomic analysis of human nucleolus.

NOL7 NSA2 NOC3L DDX54

6.18e-0610639412429849
Pubmed

Hox repertoires for motor neuron diversity and connectivity gated by a single accessory factor, FoxP1.

HOXA5 HOXC9 HOXD10

6.95e-063339318662545
Pubmed

Murine genes related to the Drosophila AbdB homeotic genes are sequentially expressed during development of the posterior part of the body.

HOXD9 HOXD10

7.34e-0643921676674
Pubmed

Down-regulation of homeobox genes MEIS1 and HOXA in MLL-rearranged acute leukemia impairs engraftment and reduces proliferation.

HOXA9 HOXA10

7.34e-06439221518888
Pubmed

Respecification of vertebral identities by retinoic acid.

HOXA10 HOXD10

7.34e-0643921358593
Pubmed

Evidence that Hoxa expression domains are evolutionarily transposed in spinal ganglia, and are established by forward spreading in paraxial mesoderm.

HOXA9 HOXA10

7.34e-06439210354475
Pubmed

HOX4 genes encode transcription factors with potential auto- and cross-regulatory capacities.

HOXD9 HOXD10

7.34e-0643921756725
Pubmed

The Mll partial tandem duplication: differential, tissue-specific activity in the presence or absence of the wild-type allele.

HOXA9 HOXA10

7.34e-06439218617636
Pubmed

MGMT-independent temozolomide resistance in pediatric glioblastoma cells associated with a PI3-kinase-mediated HOX/stem cell gene signature.

HOXA9 HOXA10

7.34e-06439220935218
Pubmed

Stage-specific homeotic vertebral transformations in mouse fetuses induced by maternal hyperthermia during somitogenesis.

HOXA5 HOXC9

7.34e-06439210633854
Pubmed

Insertion of a targeting construct in a Hoxd-10 allele can influence the control of Hoxd-9 expression.

HOXD9 HOXD10

7.34e-0643927894075
Pubmed

The establishment of murine Hox-1 expression domains during patterning of the limb.

HOXA10 HOXD10

7.34e-0643928099045
Pubmed

Hox-3.6: isolation and characterization of a new murine homeobox gene located in the 5' region of the Hox-3 cluster.

HOXC9 HOXD10

7.34e-0643921353983
Pubmed

A conserved Hox axis in the mouse and human female reproductive system: late establishment and persistent adult expression of the Hoxa cluster genes.

HOXA9 HOXA10

7.34e-0643929408238
Pubmed

Identification of 10 murine homeobox genes.

HOXA5 HOXA10 HOXB9

1.07e-05383931683707
InteractionPBX1 interactions

HOXA5 HOXA9 HOXA10 HOXD9 HOXD10

5.33e-0785385int:PBX1
InteractionPBX2 interactions

HOXA5 HOXA9 HOXA10 HOXC9 HOXD10

1.03e-0697385int:PBX2
InteractionMYBBP1A interactions

HBP1 HOXB9 ZBTB38 EED CTPS1 NSA2 NOC3L DDX54

1.95e-06463388int:MYBBP1A
InteractionEN2 interactions

HOXA5 HOXA10 HOXD10

2.22e-0614383int:EN2
InteractionMEIS1 interactions

HOXA5 HOXA9 HOXA10 HOXD9

2.73e-0652384int:MEIS1
InteractionSRPK2 interactions

MACF1 LLPH WBP11 EED RPL41 CPLANE1 NSA2 NOC3L DDX54

5.61e-06717389int:SRPK2
InteractionHOXD10 interactions

HOXA5 HOXA10 HOXD10

1.07e-0523383int:HOXD10
InteractionABT1 interactions

HOXA10 MRPS5 LLPH CTPS1 NSA2 NOC3L DDX54

1.23e-05423387int:ABT1
InteractionUSP36 interactions

MRPS5 LLPH NOL7 SDF4 EED NSA2 NOC3L DDX54

1.29e-05599388int:USP36
InteractionSRSF4 interactions

MRPS5 HBP1 NSA2 SMURF2 NOC3L DDX54

1.91e-05300386int:SRSF4
InteractionPDGFB interactions

MRPS5 NSA2 NOC3L DDX54

2.24e-0588384int:PDGFB
InteractionSDAD1 interactions

HBP1 ZBTB38 CTPS1 NSA2 NOC3L

2.97e-05193385int:SDAD1
InteractionHOXA2 interactions

HOXA5 HOXA10 HOXD10

4.60e-0537383int:HOXA2
InteractionFOXF1 interactions

SDF4 HOXB9 ZBTB38

5.82e-0540383int:FOXF1
InteractionRPL14 interactions

MACF1 LLPH EED SPATA31E1 NSA2 NOC3L DDX54

6.87e-05554387int:RPL14
InteractionGNL2 interactions

MRPS5 HBP1 WBP11 CTPS1 NSA2 NOC3L

7.81e-05386386int:GNL2
InteractionKLHL21 interactions

HOXA9 HOXC9 HOXD10

8.88e-0546383int:KLHL21
InteractionPDCD11 interactions

LLPH NOL7 EED CTPS1 NOC3L DDX54

1.02e-04405386int:PDCD11
InteractionNPM3 interactions

NOL7 EED NSA2 NOC3L DDX54

1.26e-04262385int:NPM3
InteractionANOS1 interactions

LLPH NSA2 NOC3L DDX54

1.49e-04143384int:ANOS1
InteractionGTPBP4 interactions

HOXA5 HBP1 EED CTPS1 NSA2 NOC3L

1.66e-04443386int:GTPBP4
InteractionS100P interactions

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9

1.69e-04279385int:S100P
InteractionNOC2L interactions

ZBTB38 EED NSA2 NOC3L DDX54

1.78e-04282385int:NOC2L
InteractionRPS6 interactions

MRPS5 LLPH HBP1 EED ERCC6 NSA2 NOC3L DDX54

1.86e-04874388int:RPS6
InteractionZC3H18 interactions

FNBP4 MRPS5 LLPH NOL7 WBP11 NSA2 NOC3L DDX54

1.90e-04877388int:ZC3H18
InteractionRBM34 interactions

LLPH HBP1 NSA2 NOC3L DDX54

2.03e-04290385int:RBM34
InteractionHOXA10 interactions

HOXA5 HOXA10 HOXD10

2.17e-0462383int:HOXA10
InteractionWDR43 interactions

NOL7 EED CTPS1 NOC3L

2.23e-04159384int:WDR43
InteractionBRIX1 interactions

LLPH HBP1 EED NSA2 NOC3L

2.37e-04300385int:BRIX1
InteractionRPL31 interactions

MACF1 LLPH WBP11 EED NSA2 NOC3L DDX54

2.45e-04680387int:RPL31
InteractionPSKH1 interactions

MRPS5 NOC3L DDX54

2.49e-0465383int:PSKH1
InteractionRPL13 interactions

MRPS5 LLPH EED ERCC6 NSA2 NOC3L DDX54

2.92e-04700387int:RPL13
InteractionPWP2 interactions

ZBTB38 EED CTPS1 NOC3L

3.02e-04172384int:PWP2
InteractionWDR46 interactions

LLPH EED NSA2 NOC3L

3.08e-04173384int:WDR46
InteractionPRR15 interactions

LLPH NOL7

3.11e-0414382int:PRR15
InteractionSRSF6 interactions

MRPS5 LLPH EED NSA2 NOC3L DDX54

3.29e-04503386int:SRSF6
InteractionHOXD9 interactions

HOXC9 HOXD9

3.58e-0415382int:HOXD9
InteractionRPL18 interactions

MRPS5 HBP1 EED NSA2 NOC3L DDX54

3.61e-04512386int:RPL18
InteractionZNF689 interactions

MRPS5 LLPH ZBTB38

3.66e-0474383int:ZNF689
InteractionTOP2A interactions

LLPH HBP1 ZBTB38 EED ERCC6 SMURF2

3.92e-04520386int:TOP2A
InteractionMNDA interactions

LLPH NSA2 NOC3L DDX54

4.22e-04188384int:MNDA
InteractionSRPK3 interactions

LLPH NSA2 NOC3L DDX54

4.40e-04190384int:SRPK3
InteractionRPL4 interactions

MRPS5 LLPH HBP1 EED NSA2 NOC3L DDX54

4.95e-04764387int:RPL4
InteractionMAPK14 interactions

HOXA5 HOXA10 HOXB9 HOXC9 RPL41

5.00e-04353385int:MAPK14
InteractionMRTO4 interactions

HBP1 EED CTPS1 NSA2

5.33e-04200384int:MRTO4
InteractionRPL17 interactions

MRPS5 LLPH EED NSA2 NOC3L DDX54

6.43e-04571386int:RPL17
InteractionNPW interactions

SDF4 HOXD10

6.44e-0420382int:NPW
InteractionMACROH2A2 interactions

LLPH EED NSA2 NOC3L

6.52e-04211384int:MACROH2A2
InteractionEIF5B interactions

ZBTB38 EED CTPS1 CPLANE1

6.64e-04212384int:EIF5B
InteractionDOT1L interactions

FNBP4 MRPS5 LLPH ERCC6 NSA2 NOC3L DDX54

6.85e-04807387int:DOT1L
InteractionKRR1 interactions

LLPH EED NSA2 NOC3L DDX54

6.90e-04379385int:KRR1
InteractionHOXB4 interactions

HOXA5 HOXD10

7.11e-0421382int:HOXB4
InteractionHOXA5 interactions

HOXA5 HOXA10 HOXD10

7.37e-0494383int:HOXA5
InteractionRBM19 interactions

LLPH EED NSA2 DDX54

7.75e-04221384int:RBM19
InteractionOASL interactions

LLPH NSA2 NOC3L DDX54

8.02e-04223384int:OASL
InteractionMYCN interactions

MRPS5 LLPH NOL7 WBP11 EED CTPS1 NSA2 NOC3L DDX54

8.27e-041373389int:MYCN
InteractionZC3H3 interactions

MRPS5 LLPH NSA2 DDX54

8.43e-04226384int:ZC3H3
InteractionMAST1 interactions

MRPS5 MACF1 NOC3L DDX54

8.71e-04228384int:MAST1
InteractionPBX3 interactions

HOXA9 HOXD9 HOXD10

9.07e-04101383int:PBX3
InteractionH2AC17 interactions

MRPS5 NSA2 NOC3L DDX54

9.29e-04232384int:H2AC17
InteractionS100A2 interactions

HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

1.00e-03412385int:S100A2
InteractionSIRT1 interactions

HOXA5 HOXB9 ZBTB38 EED SMURF2

1.00e-03412385int:SIRT1
InteractionID2 interactions

MACF1 WBP11 SMURF2

1.02e-03105383int:ID2
CytobandEnsembl 112 genes in cytogenetic band chr7p15

HOXA5 HOXA9 HOXA10 FAM221A

1.71e-06101394chr7p15
Cytoband7p15.2

HOXA5 HOXA9 HOXA10

6.83e-06433937p15.2
Cytoband11q22

GRIA4 MSANTD4

3.85e-051139211q22
CytobandEnsembl 112 genes in cytogenetic band chr11q22

C11orf87 GRIA4 MSANTD4

1.06e-04107393chr11q22
Cytoband2q31.1

HOXD9 HOXD10

2.35e-03843922q31.1
GeneFamilyHOXL subclass homeoboxes

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

9.09e-1352277518
CoexpressionNIKOLSKY_BREAST_CANCER_7P15_AMPLICON

HOXA5 HOXA9 HOXA10

4.98e-0711393M18241
CoexpressionMEISSNER_NPC_HCP_WITH_H3K27ME3

HOXA10 HOXB9 HOXD9 HOXD10

5.80e-0679394M1932
CoexpressionMEISSNER_NPC_HCP_WITH_H3K27ME3

HOXA10 HOXB9 HOXD9 HOXD10

6.10e-0680394MM817
CoexpressionDESCARTES_ORGANOGENESIS_LIMB_MESENCHYME

HOXA9 HOXA10 HOXD10

1.61e-0533393MM3669
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3K27ME3

HOXA5 HOXA10 HOXB9 HOXD9 HOXD10

5.00e-05272395M1938
CoexpressionALCALAY_AML_BY_NPM1_LOCALIZATION_UP

HOXA5 HOXA9 HOXA10 HOXB9

5.55e-05140394M9377
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3K27ME3

HOXA5 HOXA10 HOXB9 HOXD9 HOXD10

5.94e-05282395MM822
CoexpressionTONG_INTERACT_WITH_PTTG1

LLPH RPL41 DDX54

8.43e-0557393M3844
CoexpressionHESS_TARGETS_OF_HOXA9_AND_MEIS1_UP

HOXA9 MYLK CTPS1

1.49e-0469393M1319
CoexpressionHESS_TARGETS_OF_HOXA9_AND_MEIS1_UP

HOXA9 MYLK CTPS1

1.49e-0469393MM1158
CoexpressionMIKKELSEN_NPC_HCP_WITH_H3K27ME3

HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

1.53e-04345395M2009
CoexpressionMIKKELSEN_NPC_HCP_WITH_H3K27ME3

HOXA9 HOXB9 HOXC9 HOXD9 HOXD10

1.57e-04347395MM860
CoexpressionGSE17721_CTRL_VS_GARDIQUIMOD_12H_BMDC_DN

HOXA9 NOL7 HOXB9 CTPS1

2.11e-04198394M3792
CoexpressionGSE39556_CD8A_DC_VS_NK_CELL_UP

HOXA9 HOXA10 MACF1 MYLK

2.20e-04200394M9406
CoexpressionROSS_LEUKEMIA_WITH_MLL_FUSIONS

HOXA5 HOXA9 HOXA10

2.23e-0479393M12695
CoexpressionMULLIGHAN_MLL_SIGNATURE_1_UP

HOXA5 HOXA9 HOXA10 SDF4 HOXB9

2.54e-04385395M17856
CoexpressionAtlasgudmap_RNAseq_p2_CD2APMEISWT_2500_K2

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

4.33e-1099387gudmap_RNAseq_p2_CD2APMEISWT_2500_K2
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_k-means-cluster#4_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

1.68e-0895386gudmap_kidney_P4_CapMesRenVes_Crym_k4_500
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_k-means-cluster#3_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 LLPH EED HOXC9 HOXD10

7.38e-08207387gudmap_kidney_e13.5_Podocyte_MafB_k3_1000
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

7.93e-08123386gudmap_kidney_P3_CapMes_Crym_k3_500
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500_k-means-cluster#2

HOXA5 HOXA9 HOXA10 HOXD9 HOXD10

2.68e-0778385ratio_EB_vs_SC_500_K2
CoexpressionAtlaskidney_P0_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

1.17e-06194386gudmap_kidney_P0_CapMes_Crym_k2_500
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_k-means-cluster#1_top-relative-expression-ranked_200

HOXA9 HOXB9 HOXC9 HOXD10

1.47e-0647384gudmap_kidney_P4_CapMesRenVes_Crym_k1_200
CoexpressionAtlaskidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

1.47e-06202386gudmap_kidney_P2_CapMes_Crym_k3_500
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#1_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

3.63e-06236386gudmap_kidney_P3_CapMes_Crym_k1_1000
CoexpressionAtlaskidney_P3_CapMes_Crym_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 MYLK HOXD10

3.65e-06370387gudmap_kidney_P3_CapMes_Crym_500
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_k-means-cluster#4_top-relative-expression-ranked_500

HOXA5 HOXA10 LLPH HOXC9 HOXD10

4.09e-06135385gudmap_kidney_e13.5_Podocyte_MafB_k4_500
CoexpressionAtlaskidney_P1_CapMes_Crym_k-means-cluster#1_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 LLPH HOXB9 HOXC9 HOXD10

6.19e-06401387gudmap_kidney_P1_CapMes_Crym_k1_1000
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_k-means-cluster#4_top-relative-expression-ranked_200

HOXA5 HOXC9 HOXD10

9.14e-0623383gudmap_kidney_e13.5_Podocyte_MafB_k4_200
CoexpressionAtlasgudmap_RNAseq_e11.5_Ureteric_stalks_2500_K2

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.15e-05441387gudmap_RNAseq_e11.5_Ureteric_stalks_2500_K2
CoexpressionAtlaskidney_P2_CapMes_Crym_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

1.20e-05291386gudmap_kidney_P2_CapMes_Crym_500
CoexpressionAtlaskidney_P0_CapMes_Crym_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

1.27e-05294386gudmap_kidney_P0_CapMes_Crym_500
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 LLPH NOL7 EED HOXC9 HOXD10

1.71e-05656388gudmap_kidney_e13.5_Podocyte_MafB_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_500

HOXA9 HOXA10 GRIA4 HOXB9 HOXC9 HOXD9 HOXD10

2.45e-05496387PCBC_EB_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_500

HOXA9 HOXA10 GRIA4 HOXB9 HOXC9 HOXD9 HOXD10

2.45e-05496387PCBC_EB_blastocyst_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_500

HOXA9 HOXA10 GRIA4 HOXB9 HOXC9 HOXD9 HOXD10

2.48e-05497387PCBC_EB_fibroblast_500
CoexpressionAtlaskidney_P1_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXB9 HOXC9 HOXD10

2.50e-05196385gudmap_kidney_P1_CapMes_Crym_k4_500
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

2.51e-05498387PCBC_ratio_EB_vs_SC_500
CoexpressionAtlaskidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_200

HOXA5 HOXA9 HOXC9 HOXD10

2.79e-0598384gudmap_kidney_P2_CapMes_Crym_k3_200
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_top-relative-expression-ranked_500

HOXA5 HOXA10 LLPH NOL7 HOXC9 HOXD10

2.94e-05341386gudmap_kidney_e13.5_Podocyte_MafB_500
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_100

HOXA5 HOXA9 HOXA10 HOXB9

3.02e-05100384PCBC_ratio_EB_vs_SC_100
CoexpressionAtlaskidney_P1_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_200

HOXA5 HOXA9 HOXD10

3.94e-0537383gudmap_kidney_P1_CapMes_Crym_k2_200
CoexpressionAtlaskidney_P3_CapMes_Crym_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 LLPH HOXB9 HOXC9 MYLK HOXD10

4.41e-05749388gudmap_kidney_P3_CapMes_Crym_1000
CoexpressionAtlaskidney_P1_CapMes_Crym_top-relative-expression-ranked_200

HOXA5 HOXA9 HOXC9 HOXD10

6.17e-05120384gudmap_kidney_P1_CapMes_Crym_200
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

6.94e-05398386gudmap_kidney_P4_CapMesRenVes_Crym_500
CoexpressionAtlaskidney_P0_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_200

HOXA5 HOXC9 HOXD10

9.20e-0549383gudmap_kidney_P0_CapMes_Crym_k2_200
CoexpressionAtlaskidney_P2_CapMes_Crym_top-relative-expression-ranked_200

HOXA5 HOXA9 HOXC9 HOXD10

1.09e-04139384gudmap_kidney_P2_CapMes_Crym_200
CoexpressionAtlaskidney_P1_CapMes_Crym_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 LLPH HOXB9 HOXC9 HOXD10

1.14e-04633387gudmap_kidney_P1_CapMes_Crym_1000
CoexpressionAtlaskidney_P2_CapMes_Crym_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 MYLK HOXD10

1.18e-04636387gudmap_kidney_P2_CapMes_Crym_1000
CoexpressionAtlaskidney_P1_CapMes_Crym_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXB9 HOXC9 HOXD10

1.26e-04276385gudmap_kidney_P1_CapMes_Crym_500
CoexpressionAtlaskidney_P3_CapMes_Crym_top-relative-expression-ranked_200

HOXA5 HOXA9 HOXC9 HOXD10

2.16e-04166384gudmap_kidney_P3_CapMes_Crym_200
CoexpressionAtlasBM Top 100 - endometrium

HOXA9 HOXA10 HOXD10

2.24e-0466383BM Top 100 - endometrium
CoexpressionAtlasJC_fibro_top-relative-expression-ranked_500

HOXA9 HOXA10 HOXC9 MYLK HOXD9 HOXD10

2.26e-04494386JC_fibro_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_500_k-means-cluster#2

C11orf87 RPL41 FAM221A

2.55e-0469383Facebase_RNAseq_e10.5_Lateral Nasal Eminence_500_K2
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_top-relative-expression-ranked_200

HOXA9 HOXB9 HOXC9 HOXD10

2.64e-04175384gudmap_kidney_P4_CapMesRenVes_Crym_200
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_1000

HOXA9 HOXA10 GRIA4 HOXB9 HOXC9 BARX2 HOXD9 HOXD10

2.96e-04986388PCBC_EB_fibroblast_1000
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 MYLK HOXD10

4.19e-04783387gudmap_kidney_P4_CapMesRenVes_Crym_1000
CoexpressionAtlaskidney_P2_CapMes_Crym_top-relative-expression-ranked_100

HOXA9 HOXC9 HOXD10

4.56e-0484383gudmap_kidney_P2_CapMes_Crym_100
CoexpressionAtlaskidney_adult_Podocyte_MafB_top-relative-expression-ranked_1000

HOXA9 HOXA10 MACF1 ZBTB38 HOXC9 MYLK SLAMF9

6.29e-04838387gudmap_kidney_adult_Podocyte_MafB_1000
CoexpressionAtlasJC_iEC_top-relative-expression-ranked_500_k-means-cluster#1

HOXA5 HOXD9 HOXD10

8.74e-04105383JC_iEC_500_K1
CoexpressionAtlaskidney_P0_CapMes_Crym_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD10

8.81e-04639386gudmap_kidney_P0_CapMes_Crym_1000
CoexpressionAtlaskidney_e15.5_Podocyte_MafB_k-means-cluster#3_top-relative-expression-ranked_1000

HOXA9 HOXA10 HOXC9 HOXD10

9.96e-04249384gudmap_kidney_e15.5_Podocyte_MafB_k3_1000
CoexpressionAtlaskidney_P2_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_100

HOXA9 HOXD10

1.06e-0327382gudmap_kidney_P2_CapMes_Crym_k4_100
CoexpressionAtlasendometrium

HOXA10 HOXD9 HOXD10

1.14e-03115383endometrium
CoexpressionAtlaskidney_P0_CapMes_Crym_top-relative-expression-ranked_200

HOXA5 HOXC9 HOXD10

1.41e-03124383gudmap_kidney_P0_CapMes_Crym_200
CoexpressionAtlasgudmap_RNAseq_e15.5_Endothelial_2500_K0

HOXA5 HOXA10 HOXB9

1.48e-03126383gudmap_RNAseq_e15.5_Endothelial_2500_K0
CoexpressionAtlasJC_hmvEC_top-relative-expression-ranked_1000_k-means-cluster#2

HOXA5 HOXA9 HOXA10

1.51e-03127383JC_hmvEC_1000_K2
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_100

HOXC9 HOXD10

1.59e-0333382gudmap_kidney_P3_CapMes_Crym_k2_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_1000_k-means-cluster#1

C11orf87 RPL41 FAM221A

1.62e-03130383Facebase_RNAseq_e10.5_Lateral Nasal Eminence_1000_K1
CoexpressionAtlasgudmap_RNAseq_e15.5_Podocytes_2500_K4

HOXA5 HOXA9 HOXA10 HOXB9

1.66e-03286384gudmap_RNAseq_e15.5_Podocytes_2500_K4
CoexpressionAtlasJC_hmvEC_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 HBP1 HOXD9 HOXD10 SMURF2

1.66e-03990387JC_hmvEC_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_1000

HOXA9 HOXA10 GRIA4 HOXB9 HOXC9 HOXD9 HOXD10

1.68e-03992387PCBC_EB_blastocyst_1000
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_1000

HOXA5 HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10

1.70e-03994387PCBC_ratio_EB_vs_SC_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_1000

HOXA9 HOXA10 GRIA4 HOXB9 HOXC9 HOXD9 HOXD10

1.70e-03994387PCBC_EB_1000
CoexpressionAtlasJC_iEC_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXD9 HOXD10

1.72e-03490385JC_iEC_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_reference_PulmonMicrovasc_top-relative-expression-ranked_500

HOXA5 HOXA9 HOXA10 HOXD9 HOXD10

1.79e-03495385PCBC_ctl_PulmonMicrovasc_500
CoexpressionAtlasAravindRamakr_EmbryoidBody-LF_top-relative-expression-ranked_500

HOXA10 GRIA4 HOXB9 HOXC9 HOXD10

1.81e-03496385Arv_EB-LF_500
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_top-relative-expression-ranked_200

HOXA5 HOXC9 HOXD10

1.92e-03138383gudmap_kidney_e13.5_Podocyte_MafB_200
CoexpressionAtlasgudmap_RNAseq_e11.5_Ureteric_tips_2500_K2

HOXB9 HOXC9 HOXD9 HOXD10

2.07e-03304384gudmap_RNAseq_e11.5_Ureteric_tips_2500_K2
CoexpressionAtlasDevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_1000

FNBP4 HOXA5 HOXC9 MYLK CPLANE1 SMURF2

2.60e-03790386gudmap_developingGonad_e16.5_epididymis_1000
CoexpressionAtlaskidney_P1_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_100

HOXC9 HOXD10

2.69e-0343382gudmap_kidney_P1_CapMes_Crym_k4_100
CoexpressionAtlasDevelopingGonad_e18.5_epididymis_emap-13166_top-relative-expression-ranked_1000

FNBP4 HOXA5 HOXC9 MYLK CPLANE1 SMURF2

2.75e-03799386gudmap_developingGonad_e18.5_epididymis_1000
ToppCell3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 GRIA4 HOXD9 HOXD10

5.88e-071863958ea708070166c858cd9bd871670655b0114c32a5
ToppCell5'-GW_trimst-2-LargeIntestine|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 GRIA4 HOXB9 HOXD10

7.42e-071953951a4a5623fa0318ef388cc228c7060e0586a7acf9
ToppCell5'-GW_trimst-1.5-LargeIntestine|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 MYLK HOXD9 HOXD10

7.80e-071973950b2ad6a933ff1a325649cc8f139380fd158a1d42
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 MYLK HOXD9 HOXD10

7.80e-071973955f6fce382f273e789ffbb75b63e9b4e87519918e
ToppCell3'-GW_trimst-1-LargeIntestine|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXC9 HOXD9 HOXD10

8.00e-07198395ea6621a148a96c8ffa1a93a35c9e288545d2637a
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 GRIA4 HOXD9 HOXD10

8.20e-07199395a95aa72387c9558e0316898eaa9df4de8932af1b
ToppCell3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 GRIA4 HOXD10

8.68e-06149394aedbae2dffa1e880e5c6a146b6d5a135e7f54308
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 GRIA4 HOXD10

1.33e-051663943b67064a5149e72f895344d938c64b8ff65247f5
ToppCell3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

1.46e-05170394b5b47fe42617a4c2ebb49c8ed55db3926213a75a
ToppCellCOVID-19_Mild-Hematopoietic_SC-HSPC|COVID-19_Mild / Disease group, lineage and cell class

HOXA5 HOXA9 HOXA10 CCDC181

1.79e-0517939419fcf48f5e02e4cb2b328efb4502f337e1282f72
ToppCellCOVID-19_Mild-Hematopoietic_SC|COVID-19_Mild / Disease group, lineage and cell class

HOXA5 HOXA9 HOXA10 CCDC181

1.79e-0517939450a073166e34bcfa52a62c4dafb3aef724e0fa8e
ToppCell3'-GW_trimst-2-LargeIntestine-Mesenchymal-myocytic|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 MYLK HOXD10

1.91e-05182394728a2152c166551ac229370c0900fe2bc426ea9b
ToppCellfacs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

HOXA9 HOXA10 HOXB9 HOXC9

2.08e-05186394bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCell3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(CH25H+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.12e-0518739439756ab418267151d86f9c2553db859f71900bb1
ToppCell3'-GW_trimst-1.5-LargeIntestine|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.35e-051923949946f5d5cab64936ca68d9f4dc9ce6eba85b43ab
ToppCelldroplet-Mammary_Gland-nan-18m-Endothelial-endothelial_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA5 HOXB9 HOXD9 HOXD10

2.35e-05192394945153c41dde6e90d103206955e1707b54eb0665
ToppCelldroplet-Mammary_Gland-nan-18m-Endothelial|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA5 HOXB9 HOXD9 HOXD10

2.35e-051923946ab50579c63f31ca2cd41063a99b129f11c07510
ToppCell3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 GRIA4 HOXD10

2.40e-0519339468089ba4123e2f9bea9aae0023a844b5a57bfc0e
ToppCellLAM-LAM|LAM / Condition, Lineage and Cell class

HOXA9 HOXA10 HOXC9 MYLK

2.45e-051943944c6561a64711c72c4ef4a3e67c41d2e8d31fba57
ToppCellLAM-LAM-LAM+|LAM / Condition, Lineage and Cell class

HOXA9 HOXA10 HOXC9 MYLK

2.45e-051943944ba73a9145ed44896e359f6df9c1f32bbe24a189
ToppCelldroplet-Mammary_Gland-nan-18m-Endothelial-endothelial_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA5 HOXB9 HOXD9 HOXD10

2.50e-051953944db30b3bc65c25626f828cd4f867f20c71809898
ToppCell3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_1_(HAND1+)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.55e-05196394fd0a2b863dedaf08d18e7f67da18ac7e853991e4
ToppCell3'-GW_trimst-2-LargeIntestine|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXB9 HOXD10

2.55e-0519639427a216af92100224818c91e298428bee25ab0af8
ToppCell3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.55e-05196394a7adc0e0baef261d0937e4e8351321d41beca82f
ToppCell3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.60e-05197394ad6c200a193a15360d17463e18a465ce1b90b8da
ToppCell3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.60e-05197394fc718a254bda4df2d62975d04393492fb75ab305
ToppCell3'-GW_trimst-1-LargeIntestine-Mesenchymal|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.60e-05197394c7b33d64e5cba3a8fc6f2d6aa85ebc83893195de
ToppCell5'-GW_trimst-2-LargeIntestine-Mesenchymal|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 MYLK HOXD10

2.71e-051993943d8c76e3d05acf72a35ca755b51579fc3ae63562
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9 HOXD10

2.71e-05199394bb201deb281619113edcd1de2af2d3eb21b967b8
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell-Connecting_Tubule_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

HOXA9 MACF1 HOXB9 HOXD10

2.71e-051993943cd6383c50ce342fe5c175e2e50784d634a90e80
ToppCellsevere-cDC|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

HOXA5 HOXA9 HOXA10 SLAMF9

2.76e-0520039423e3d2fb86a71f62cca32640842fbba5dd163453
ToppCelldroplet-Skin-nan-18m-Epithelial-basal_cell_of_epidermis|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA9 HOXA10 RPL41

1.29e-0411239332c6ab8e9b71c6c3df7e3e119b88e6ad1b895d50
ToppCelldroplet-Skin-nan-18m-Epithelial|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA9 HOXA10 RPL41

1.66e-041223938f675dc341b3f6e22f7e52c34d167d9e37df0982
ToppCelldroplet-Skin-nan-18m-Epithelial-nan|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA9 HOXA10 RPL41

1.66e-04122393c7e81504e62d132624ec15b7d38dc5b6493a37a4
ToppCelldroplet-Skin-nan-18m|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA9 HOXA10 RPL41

1.78e-041253935a309ce803d2b8efd791eb21808121bf5fc3ea8e
ToppCellE18.5-samps-Mesenchymal-Matrix_fibroblast-matrix_-_immature_4|E18.5-samps / Age Group, Lineage, Cell class and subclass

HOXA9 GRIA4 ERCC6

2.00e-04130393169d88bffd7cd813a484d809defa638ceaca4bcb
ToppCellnormal_Lung-T/NK_cells-CD8_low_T|T/NK_cells / Location, Cell class and cell subclass

HOXC9 RPL41 SLAMF9

2.48e-041403933f003320d797f18d2dfc38eab7f094f75027958e
ToppCellCOVID-19_Moderate-multiplets|COVID-19_Moderate / disease group, cell group and cell class

MACF1 C11orf87 ANKRD30BL

2.86e-04147393baf15c773d7751bc6f64d4974a22738626f2b3ff
ToppCell10x5'v1-week_14-16-Hematopoietic-HSC/MPP_and_pro-MEMP|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

HOXA9 HOXA10 CCDC181

3.22e-0415339314753baa9980f75206fefc3c8b43685fd4178a43
ToppCell10x5'-blood-Lymphocytic_T_CD8-Trm_gut_CD8|blood / Manually curated celltypes from each tissue

MSANTD4 CTPS1 NOC3L

3.28e-04154393c77a02df403358361aca86c679d5c43a64ff2f7f
ToppCellPBMC-Severe-Myeloid-cDC-cDC-cDC_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA5 HOXA9 HOXA10

3.47e-04157393f896997490bb2eec598c6581f161220e70f9a991
ToppCellPBMC-Severe-Myeloid-cDC-cDC-cDC_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

HOXA5 HOXA9 HOXA10

3.47e-0415739314a8516346a89a89f1119b744625bd9844a74a03
ToppCellnormal_Lung-B_lymphocytes-Undetermined|normal_Lung / Location, Cell class and cell subclass

HOXA10 BARX2 RPL41

3.60e-04159393f89fc18966d9b9b33e81e7b9eb3ec3420c20ff43
ToppCell10x5'-bone_marrow-Mast-Mast_cells|bone_marrow / Manually curated celltypes from each tissue

HOXA9 HOXA10 BAIAP2L2

3.74e-0416139315ba7e69699558353cfeecdcf1dbc2e147379ed6
ToppCellHippocampus-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)|Hippocampus / BrainAtlas - Mouse McCarroll V32

GRIA4 MSANTD4 BAIAP2L2

3.74e-04161393b81b346309f3facbfbebd91cae4c5b33c7bd24ef
ToppCellfacs-Lung-Endomucin-24m-Epithelial-Alveolar_Epithelial_Type_2|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BARX2 ZDHHC3 NSA2

3.81e-04162393497ae9f86a5e7946d0fde932b35719a382a6b691
ToppCellfacs-Lung-Endomucin-24m-Epithelial-type_II_pneumocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BARX2 ZDHHC3 NSA2

3.81e-041623937b2949eba2b4aea239d96ed82aafab13b07624eb
ToppCellE18.5-samps-Mesenchymal-Matrix_fibroblast-MatrixFB-A|E18.5-samps / Age Group, Lineage, Cell class and subclass

MACF1 MYLK HOXD9

3.95e-04164393519ab4fe885dfe4c50846f346a062acc2cb44299
ToppCell10x5'-GI_small-bowel-Lymphocytic_NK-NK_CD56bright_CD16-|GI_small-bowel / Manually curated celltypes from each tissue

HOXA5 HOXA9 HOXA10

3.95e-0416439336e64e4f717dd59b352c20ff9742ca1e232342bb
ToppCellMultiple_Sclerosis-Other-HSPC|Multiple_Sclerosis / Disease, Lineage and Cell Type

HOXA5 HOXA9 HOXA10

3.95e-041643936af5529507d695b347adee4be5ead70f56c9cf55
ToppCell10x5'-lymph-node_spleen-Hematopoietic_progenitors-Progenitor|lymph-node_spleen / Manually curated celltypes from each tissue

HOXA9 HOXA10 MYLK

4.02e-041653937b992843bd8ef92a7a76b1d681fa84efde6f5bdd
ToppCelllymphoid-B_cell-pro-B|lymphoid / Lineage, cell class and subclass

HOXA9 HOXA10 MYLK

4.02e-041653938126c2f7810fc6e09b18783aadf6434ae12b0514
ToppCell3'_v3-GI_small-bowel-Lymphocytic_Invariant-Inducer-like-ILC3|GI_small-bowel / Manually curated celltypes from each tissue

HOXA5 HOXA9 HOXA10

4.09e-04166393773673a5d0430640439845b264740bfbbdad0cb2
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(CH25H+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXC9

4.09e-04166393d1c61270c7b39bb365020eeafe298a8f88aa887e
ToppCell3'_v3-GI_small-bowel-Lymphocytic_Invariant-Inducer-like|GI_small-bowel / Manually curated celltypes from each tissue

HOXA5 HOXA9 HOXA10

4.16e-041673933ae46c6363da76c8e1f5579e6027bf88ed637a44
ToppCell3'_v3-lymph-node_spleen-Hematopoietic_progenitors-Progenitor|lymph-node_spleen / Manually curated celltypes from each tissue

HOXA5 HOXA9 HOXA10

4.16e-04167393cb396f3edb9e8fdc316091e8e193dbba50e0be0c
ToppCellfacs-Aorta-Heart-24m-Endothelial-endocardial_endothelial_cells|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA5 HOXB9 CCDC181

4.23e-04168393edbab94f14e16a1a76546a18fe777a183080d1de
ToppCellmild_COVID-19-HSPC|mild_COVID-19 / disease group, cell group and cell class (v2)

HOXA5 HOXA9 HOXA10

4.23e-0416839390b33962adb77d8326dee403712118398b4d1315
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-myocytic-SMC_(PART1/CAPN3+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXC9 MYLK

4.23e-0416839374d6dbf9295933acdee785af9b73a94377d15412
ToppCell10x5'-GI_small-bowel-Lymphocytic_Invariant-Inducer-like|GI_small-bowel / Manually curated celltypes from each tissue

HOXA5 HOXA9 HOXA10

4.23e-04168393d02eba7ece17edcdd47fd6b784c93910ce61090f
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXA10 HOXD9

4.38e-04170393a7184dc41f90caa753860ed0f65a18133f84bc5f
ToppCell10x5'-GI_small-bowel-Lymphocytic_Invariant-Inducer-like-ILC3|GI_small-bowel / Manually curated celltypes from each tissue

HOXA5 HOXA9 HOXA10

4.38e-0417039397df5ffb328196c46568975d2d97722bcc753bf5
ToppCellCOVID-19_Convalescent-Hematopoietic_SC|COVID-19_Convalescent / Disease group, lineage and cell class

HOXA5 HOXA9 HOXA10

4.38e-041703938a73d5334eed1cd9fdcc3ebeae0bdf9f945c228a
ToppCellPND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_prolif|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MACF1 C11orf87 MYLK

4.38e-04170393e20568c8f3f17d94de78229617eb2f7e4c5af2bc
ToppCellremission-HSPC|remission / disease stage, cell group and cell class

HOXA5 HOXA9 HOXA10

4.46e-0417139341b424e58470a2fc25632aea50a37c7c5ea17645
ToppCell5'-GW_trimst-2-LargeIntestine-Epithelial-neuro-epithelial-Progenitor_(NEUROG3+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXA9 HOXB9 FAM221A

4.46e-04171393c54dcad75fc378da1943009d7dd872b39ea337c0
ToppCellnormal_Lung-B_lymphocytes-Undetermined|B_lymphocytes / Location, Cell class and cell subclass

HOXA5 HOXA10 BARX2

4.46e-04171393f49dfe11ae66d82125b577c48345a13683d7bb7b
ToppCelllymphoid-B_cell-pro-B|B_cell / Lineage, cell class and subclass

HOXA9 HOXA10 MYLK

4.53e-04172393da1e2e54f442f5c2032c857c4812e9060f2053cd
ToppCell3'_v3-blood-Mast|blood / Manually curated celltypes from each tissue

HOXA5 HOXA9 BAIAP2L2

4.53e-04172393e7a46bbeff749ca59b9f1357409ce1ad59dd22dd
ToppCellTCGA-Breast-Primary_Tumor-Breast_Carcinoma-Infiltrating_Ductal_Carcinoma-7|TCGA-Breast / Sample_Type by Project: Shred V9

MRPS5 CTPS1 BAIAP2L2

4.53e-04172393a2c3b790be85f7fd23f2dc919dcc749656920e71
ToppCellP03-Mesenchymal-developing_mesenchymal_cell-mesenchymal_immature_unknown_1|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

HOXA5 MACF1 MYLK

4.77e-04175393282f09bbdfa70d93b3f66591dcfb84c5ee0268c7
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c05-ZNF683|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

ZBTB38 TRPA1 BAIAP2L2

4.85e-041763935914e7635474e7cf24d446bdb1423bc0807ee9c6
ToppCell3'_v3-blood-Mast-Mast_cells|blood / Manually curated celltypes from each tissue

HOXA5 HOXA9 BAIAP2L2

4.85e-04176393b9da3deaf62622d47eb30b6be7548253eee95597
ToppCellsevere_COVID-19-HSPC|World / disease group, cell group and cell class (v2)

HOXA5 HOXA9 CCDC181

4.93e-04177393289f6aed6f054b04b01659434d8c8b467d1bf5dd
ToppCelltumor_Lung-Endothelial_cells-EPCs|tumor_Lung / Location, Cell class and cell subclass

HOXB9 HOXD9 HOXD10

4.93e-04177393f8b152c09d56a97e8c0482fb1a3964c05f9dc8c5
ToppCellcontrol-Others-CD34+_GATA2+_cells|control / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

HOXA5 HOXA9 HOXA10

5.01e-041783932120bd3e099b0b271bf079db9827a2f3eee2f909
ToppCellPBMC-Mild-Hematopoietic-HSPC|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA9 HOXA10 CCDC181

5.09e-041793932f690f933bf6b99abeb31766e0b22bdbe36c1ba0
ToppCellPBMC-Mild-Hematopoietic-HSPC-HSPC-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA9 HOXA10 CCDC181

5.09e-041793934bb2debfc9e9f258cd38e797ef160bd440aad6af
ToppCellPBMC-Mild-Hematopoietic-HSPC-HSPC|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA9 HOXA10 CCDC181

5.09e-041793933e2c937369b8190fd5d5a31689d029e6e89fb5e2
ToppCellE15.5-Mesenchymal-mesenchymal_fibroblast-alveolar_fibroblast_Wnt2-pa|E15.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

HOXA5 MACF1 MYLK

5.09e-04179393b559f5a72cc9e3e35d05cb539b5c2e006e56e652
ToppCell-Donor_02|World / lung cells shred on cell class, cell subclass, sample id

HOXA5 C11orf87 HOXC9

5.09e-0417939310fadbaa1b6d21cbf9f354d717cc4c225619f4fd
ToppCell3'_v3-bone_marrow-Mast|bone_marrow / Manually curated celltypes from each tissue

HOXA5 HOXA9 GRIA4

5.18e-04180393b37ee81b792213d6595b4ec65d04bc35d83321c7
ToppCellPBMC-Mild-Hematopoietic-HSPC-HSPC|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

HOXA9 HOXA10 CCDC181

5.26e-0418139354a19cf6a3b752e2391feb8b316bebee0e602d17
ToppCellPBMC-Mild-Hematopoietic-HSPC|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

HOXA9 HOXA10 CCDC181

5.26e-041813935b84625b1d3737708001b64f6da9360330d39a27
ToppCellPBMC-Mild-Hematopoietic-HSPC-HSPC-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

HOXA9 HOXA10 CCDC181

5.26e-04181393e7f7b519c2a01c15f26df11ec9b434c0d1630c7a
ToppCellsystemic_lupus_erythematosus-managed-Hematopoietic-progenitor_cell-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

HOXA9 HOXA10 CCDC181

5.26e-04181393070ae3f3fe0e177fabcf34e64a0f158b01354837
ToppCellPBMC-Control-Hematopoietic-HSPC-HSPC-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

HOXA9 HOXA10 CCDC181

5.35e-041823936497eeafb2b137e70261ec0314782831892a940d
ToppCellE18.5-samps-Mesenchymal-Matrix_fibroblast|E18.5-samps / Age Group, Lineage, Cell class and subclass

MACF1 MYLK HOXD9

5.35e-04182393ceb37c214662a48efb56ab0d015977c6fab478b0
ToppCellfacs-Marrow-KLS-3m-Hematologic-MPP_Fraction_B|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA9 HOXA10 RPL41

5.35e-04182393e7138c8d3821b4141c4b1b23dab6d9b4e99fd4b2
ToppCell10x_5'_v1-Non-neoplastic-Myeloid-DC-cDC2|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HOXA5 HOXA9 RPL41

5.35e-041823931d37c486173cc4629842893ddd5033987c04086f
ToppCellControl-Hematopoietic_SC-HSPC|Control / Disease group, lineage and cell class

HOXA9 HOXA10 CCDC181

5.35e-0418239314e347c0e6444410f1948851407bb18c706569f4
ToppCellControl-Hematopoietic_SC|Control / Disease group, lineage and cell class

HOXA9 HOXA10 CCDC181

5.35e-0418239343243c6bae2ac7fa3fd1f193a17f61ee4d938ea9
ToppCellPBMC-Control-Hematopoietic-HSPC-HSPC|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA9 HOXA10 CCDC181

5.35e-04182393d0ebf2f0d5370458ab81485a0017c311077133d5
ToppCellPBMC-Control-Hematopoietic-HSPC|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA9 HOXA10 CCDC181

5.35e-04182393918286422b3eab32d962b49aa07b1b9512e51d9d
ToppCellPBMC-Control-Hematopoietic-HSPC|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

HOXA9 HOXA10 CCDC181

5.35e-04182393bd1626261803324084fafca2f6665b50854e7fae
ToppCellPBMC-Control-Hematopoietic-HSPC-HSPC-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HOXA9 HOXA10 CCDC181

5.35e-041823932a6d1246bfb5899a0861c7f2f8fb9b43b0df8acc
ToppCell10x_5'_v1-Non-neoplastic-Myeloid-DC-cDC2-Z|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HOXA5 HOXA9 RPL41

5.35e-04182393aef67bdc6937b315522d39959e26c9b0acf7ab52
ToppCellPBMC-Control-Hematopoietic-HSPC-HSPC|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

HOXA9 HOXA10 CCDC181

5.35e-041823930d9b8c900da8cbae9cde72aecd4026b1ac2bbd67
ToppCell10x_5'_v1-Non-neoplastic-Myeloid-DC|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HOXA5 HOXA9 RPL41

5.35e-04182393087c9f88daf08f5d688b728c2386f91f210d2255
ToppCellhematopoetic_progenitors-CD34+_MEP_2|World / Lineage and Cell class

HOXA5 HOXA9 CCDC181

5.35e-04182393a7e7aa10f14111a6c7ba22e0f1668dcaa124714d
Drugthioxoberyllium

HOXA5 HOXA9 HOXA10 MYLK

1.60e-0650394CID000083605
Diseasematrix metalloproteinase 12 measurement

GRIA4 MSANTD4

2.31e-0418372EFO_0010590
Diseaseovarian neoplasm

HOXB9 ERCC6 HOXD9

6.36e-04134373C0919267
DiseaseMalignant neoplasm of ovary

HOXB9 ERCC6 HOXD9

6.78e-04137373C1140680
DiseaseSquamous cell carcinoma of the head and neck

HOXA5 HOXD10

1.95e-0352372C1168401
DiseaseMouth Neoplasms

HOXA5 HOXD10

2.10e-0354372C0026640
DiseaseMalignant neoplasm of mouth

HOXA5 HOXD10

2.10e-0354372C0153381

Protein segments in the cluster

PeptideGeneStartEntry
RKISAKEMQRWIMEK

SDF4

116

Q9BRK5
IRTGKRKKKAWKRMV

NSA2

136

O95478
RRRKMTKILCKWKKA

ERCC6

571

P0DP91
VKIWFQNRRMKMKKM

HOXC9

236

P31274
LSKDRMKKYMARRKW

MYLK

1731

Q15746
MKKYMARRKWQKTGN

MYLK

1736

Q15746
MAKSLRSKWKRKMRA

LLPH

1

Q9BRT6
WRMERKRDKNVREMK

BAIAP2L2

141

Q6UXY1
AMAQWRKKKGLRKRR

DDX54

16

Q8TDD1
MVIKLMDRWKKLDQR

GRIA4

271

P48058
RRMKWKKDNKLKSMS

HOXA5

246

P20719
KIWFQNRRMKMKKIN

HOXA9

251

P31269
IWFQNRRMKMKKMSK

HOXD9

331

P28356
KLWRINSKRMMNAIK

EED

261

O75530
KIWFQNRRMKLKKMN

HOXA10

381

P31260
MRAKWRKKRMRRLKR

RPL41

1

P62945
WRKKYMRWMNHKKSR

MACF1

7031

Q9UPN3
AKRFKRRWMVRKMKT

NOL7

241

Q9UMY1
IWFQNRRMKMKKMNK

HOXB9

231

P17482
KQWLRRKRMEKMAEQ

CCDC181

456

Q5TID7
RWARKVMQKIRMKGS

CPLANE1

1216

Q9H799
IQAWMKRKRKERMAK

CPLANE1

2896

Q9H799
YQNRRMKWKKMVLKG

BARX2

181

Q9UMQ3
KIWFQNRRMKLKKMS

HOXD10

311

P28358
RWKKMKNEERRMYTL

HBP1

471

O60381
RRYQERMKMEKAAKW

FAM221A

271

A4D161
NKEVIMAMKKLWRRK

OR4D5

291

Q8NGN0
KEKRKSLSRMQRKWK

NOC3L

451

Q8WTT2
RKKKMKVKRERGWSG

MRPS5

181

P82675
MRRLMSKRGKWKMFV

FNBP4

446

Q8N3X1
RQPRKMLMKWKEMAD

CTPS1

276

P17812
KRALMKMWQEKERKR

SPATA31E1

371

Q6ZUB1
WRALMKRKRMKANIK

MSANTD4

76

Q8NCY6
ASRGQAWKLERMMKK

ANKRD30BL

46

A7E2S9
KRRMKKRKMQRAQEE

C11orf87

86

Q6NUJ2
MKMRPKDLWKRLMIK

SMURF2

411

Q9HAU4
MKRSLRKMWRPGEKK

TRPA1

1

O75762
ERRWAKKTKWMNMKA

ZDHHC3

256

Q9NYG2
KRHKMPRMKKLMRNR

SLAMF9

261

Q96A28
PRMKKLMRNRMKLRK

SLAMF9

266

Q96A28
KKSRQLKKMRKVNWR

ZBTB38

926

Q8NAP3
RKRELKKNKKQRMMV

WBP11

26

Q9Y2W2