Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	chromatin binding	JARID2 LHX2 GTF2F1 CHD4 HMGA1 HMGA2 L3MBTL2 SCMH1 MECP2 CBX8 CBX2	1.44e-07	739	40	11	GO:0003682
GeneOntologyMolecularFunction	histone binding	CHD4 L3MBTL2 SCMH1 HDGFL2 PHIP CBX8 CBX2	8.59e-07	265	40	7	GO:0042393
GeneOntologyMolecularFunction	modification-dependent protein binding	JARID2 L3MBTL2 HDGFL2 PHIP CBX8 CBX2	3.21e-06	206	40	6	GO:0140030
GeneOntologyMolecularFunction	histone reader activity	JARID2 HDGFL2 MECP2	1.88e-05	26	40	3	GO:0140566
GeneOntologyMolecularFunction	methylated histone binding	L3MBTL2 HDGFL2 CBX8 CBX2	2.60e-05	86	40	4	GO:0035064
GeneOntologyMolecularFunction	methylation-dependent protein binding	L3MBTL2 HDGFL2 CBX8 CBX2	2.85e-05	88	40	4	GO:0140034
GeneOntologyMolecularFunction	chromatin-protein adaptor activity	JARID2 HDGFL2 MECP2	7.53e-05	41	40	3	GO:0140463
GeneOntologyMolecularFunction	DNA secondary structure binding	HMGA1 HMGA2 MECP2	7.53e-05	41	40	3	GO:0000217
GeneOntologyMolecularFunction	transcription factor binding	JARID2 LHX2 GTF2F1 CHD4 HMGA1 PRKDC HMGA2 MECP2	1.04e-04	753	40	8	GO:0008134
GeneOntologyMolecularFunction	5'-deoxyribose-5-phosphate lyase activity	HMGA1 HMGA2	1.09e-04	8	40	2	GO:0051575
GeneOntologyMolecularFunction	minor groove of adenine-thymine-rich DNA binding	HMGA1 HMGA2	2.13e-04	11	40	2	GO:0003680
GeneOntologyMolecularFunction	DNA-(apurinic or apyrimidinic site) endonuclease activity	HMGA1 HMGA2	3.51e-04	14	40	2	GO:0003906
GeneOntologyMolecularFunction	promoter-specific chromatin binding	GTF2F1 L3MBTL2 MECP2	6.12e-04	83	40	3	GO:1990841
GeneOntologyMolecularFunction	DNA binding, bending	HMGA1 HMGA2	7.27e-04	20	40	2	GO:0008301
GeneOntologyMolecularFunction	histone modifying activity	JARID2 PRKDC BRPF1 SETBP1	1.11e-03	229	40	4	GO:0140993
GeneOntologyMolecularFunction	histone H3 methyltransferase activity	JARID2 SETBP1	3.51e-03	44	40	2	GO:0140938
GeneOntologyMolecularFunction	chromatin DNA binding	CHD4 HMGA2 MECP2	4.52e-03	167	40	3	GO:0031490
GeneOntologyMolecularFunction	S-adenosylmethionine-dependent methyltransferase activity	JARID2 NOP2 SETBP1	4.91e-03	172	40	3	GO:0008757
GeneOntologyMolecularFunction	DNA-binding transcription activator activity, RNA polymerase II-specific	SOX12 LHX2 ELF1 HMGA1 HMGA2	4.99e-03	560	40	5	GO:0001228
GeneOntologyMolecularFunction	DNA-binding transcription activator activity	SOX12 LHX2 ELF1 HMGA1 HMGA2	5.21e-03	566	40	5	GO:0001216
GeneOntologyMolecularFunction	regulatory RNA binding	MECP2 TUT7	6.86e-03	62	40	2	GO:0061980
GeneOntologyMolecularFunction	nucleosomal DNA binding	CHD4 HMGA2	7.97e-03	67	40	2	GO:0031492
GeneOntologyMolecularFunction	protein-lysine N-methyltransferase activity	JARID2 SETBP1	8.20e-03	68	40	2	GO:0016279
GeneOntologyMolecularFunction	lysine N-methyltransferase activity	JARID2 SETBP1	8.43e-03	69	40	2	GO:0016278
GeneOntologyMolecularFunction	methyltransferase activity	JARID2 NOP2 SETBP1	8.85e-03	213	40	3	GO:0008168
GeneOntologyMolecularFunction	histone methyltransferase activity	JARID2 SETBP1	8.91e-03	71	40	2	GO:0042054
GeneOntologyMolecularFunction	catalytic activity, acting on a nucleic acid	CHD4 HMGA1 HMGA2 NOP2 TUT7	8.95e-03	645	40	5	GO:0140640
GeneOntologyMolecularFunction	RNA polymerase II-specific DNA-binding transcription factor binding	CHD4 HMGA1 PRKDC HMGA2	9.47e-03	417	40	4	GO:0061629
GeneOntologyMolecularFunction	transferase activity, transferring one-carbon groups	JARID2 NOP2 SETBP1	1.01e-02	224	40	3	GO:0016741
GeneOntologyMolecularFunction	transcription corepressor activity	CHD4 HMGA2 MECP2	1.08e-02	229	40	3	GO:0003714
GeneOntologyMolecularFunction	RNA polymerase II cis-regulatory region sequence-specific DNA binding	SOX12 LHX2 ELF1 HMGA1 HMGA2 EN2 ZBTB24	1.09e-02	1244	40	7	GO:0000978
GeneOntologyMolecularFunction	carbon-oxygen lyase activity	HMGA1 HMGA2	1.17e-02	82	40	2	GO:0016835
GeneOntologyMolecularFunction	cis-regulatory region sequence-specific DNA binding	SOX12 LHX2 ELF1 HMGA1 HMGA2 EN2 ZBTB24	1.22e-02	1271	40	7	GO:0000987
GeneOntologyBiologicalProcess	chromatin organization	MKI67 JARID2 LHX2 CHD4 HMGA1 PRKDC HMGA2 L3MBTL2 SCMH1 HDGFL2 MECP2 CBX8 BRPF1 SETBP1 CBX2	7.26e-11	896	41	15	GO:0006325
GeneOntologyBiologicalProcess	protein-DNA complex organization	MKI67 JARID2 LHX2 CHD4 HMGA1 PRKDC HMGA2 L3MBTL2 SCMH1 HDGFL2 MECP2 CBX8 BRPF1 SETBP1 CBX2	3.31e-10	999	41	15	GO:0071824
GeneOntologyBiologicalProcess	chromatin remodeling	JARID2 LHX2 CHD4 HMGA1 PRKDC HMGA2 SCMH1 HDGFL2 MECP2 CBX8 BRPF1 SETBP1	1.28e-08	741	41	12	GO:0006338
GeneOntologyBiologicalProcess	negative regulation of gene expression, epigenetic	JARID2 LHX2 HMGA2 SCMH1 MECP2 CBX8	2.85e-06	203	41	6	GO:0045814
GeneOntologyBiologicalProcess	negative regulation of DNA-templated transcription	JARID2 SOX12 CHD4 HMGA1 HMGA2 L3MBTL2 SCMH1 MECP2 ZBTB24 CBX8 NOTCH3 CBX2	1.13e-05	1399	41	12	GO:0045892
GeneOntologyBiologicalProcess	negative regulation of RNA biosynthetic process	JARID2 SOX12 CHD4 HMGA1 HMGA2 L3MBTL2 SCMH1 MECP2 ZBTB24 CBX8 NOTCH3 CBX2	1.25e-05	1413	41	12	GO:1902679
GeneOntologyBiologicalProcess	heterochromatin formation	JARID2 HMGA2 SCMH1 MECP2 CBX8	1.73e-05	163	41	5	GO:0031507
GeneOntologyBiologicalProcess	negative regulation of transcription by RNA polymerase II	JARID2 SOX12 CHD4 HMGA1 HMGA2 MECP2 ZBTB24 CBX8 NOTCH3 CBX2	3.03e-05	1053	41	10	GO:0000122
GeneOntologyBiologicalProcess	DNA repair	PDS5B CHD4 HMGA1 PRKDC HMGA2 HDGFL2 SLX4 CBX8	3.47e-05	648	41	8	GO:0006281
GeneOntologyBiologicalProcess	epigenetic regulation of gene expression	JARID2 LHX2 HMGA2 SCMH1 MECP2 CBX8	4.49e-05	330	41	6	GO:0040029
GeneOntologyBiologicalProcess	positive regulation of growth	RIMS1 PRKDC HMGA2 SASH3 HDGFL2 MECP2	5.22e-05	339	41	6	GO:0045927
GeneOntologyBiologicalProcess	developmental growth	JARID2 LHX2 RIMS1 HMGA1 PRKDC HMGA2 SASH3 HDGFL2 MECP2	6.01e-05	911	41	9	GO:0048589
GeneOntologyBiologicalProcess	positive regulation of transcription by RNA polymerase II	SOX12 LHX2 ELF1 GTF2F1 HMGA1 PRKDC HMGA2 EN2 MECP2 PHIP NOTCH3	6.02e-05	1390	41	11	GO:0045944
GeneOntologyBiologicalProcess	oncogene-induced cell senescence	HMGA1 HMGA2	8.04e-05	7	41	2	GO:0090402
GeneOntologyBiologicalProcess	positive regulation of developmental growth	RIMS1 PRKDC HMGA2 SASH3 MECP2	1.05e-04	238	41	5	GO:0048639
GeneOntologyBiologicalProcess	growth	JARID2 LHX2 RIMS1 HMGA1 PRKDC HMGA2 SASH3 HDGFL2 MECP2 PHIP	1.16e-04	1235	41	10	GO:0040007
GeneOntologyBiologicalProcess	regulation of growth	JARID2 RIMS1 PRKDC HMGA2 SASH3 HDGFL2 MECP2 PHIP	1.24e-04	777	41	8	GO:0040008
GeneOntologyBiologicalProcess	regulation of fibroblast proliferation	PRKDC HMGA2 PHIP BRPF1	1.47e-04	135	41	4	GO:0048145
GeneOntologyBiologicalProcess	regulation of developmental growth	JARID2 RIMS1 PRKDC HMGA2 SASH3 MECP2	1.71e-04	421	41	6	GO:0048638
GeneOntologyBiologicalProcess	fibroblast proliferation	PRKDC HMGA2 PHIP BRPF1	2.82e-04	160	41	4	GO:0048144
GeneOntologyBiologicalProcess	double-strand break repair	CHD4 PRKDC HMGA2 HDGFL2 SLX4	4.37e-04	324	41	5	GO:0006302
GeneOntologyBiologicalProcess	positive regulation of cell population proliferation	LHX2 PRKDC HMGA2 NOP2 SASH3 MECP2 PHIP CBX8 NOTCH3	4.50e-04	1190	41	9	GO:0008284
GeneOntologyBiologicalProcess	DNA damage response	PDS5B CHD4 HMGA1 PRKDC HMGA2 HDGFL2 SLX4 CBX8	5.16e-04	959	41	8	GO:0006974
GeneOntologyBiologicalProcess	positive regulation of fibroblast proliferation	PRKDC HMGA2 PHIP	6.43e-04	85	41	3	GO:0048146
GeneOntologyBiologicalProcess	negative regulation of astrocyte differentiation	HMGA2 MECP2	8.68e-04	22	41	2	GO:0048712
GeneOntologyBiologicalProcess	sexual reproduction	MKI67 CYLC2 RIMS1 HMGA1 HMGA2 SCMH1 MECP2 SLX4 TUT7	9.10e-04	1312	41	9	GO:0019953
GeneOntologyCellularComponent	chromatin	PDS5B JARID2 SOX12 LHX2 ELF1 CHD4 HMGA1 PRKDC HMGA2 EN2 MECP2 SLX4 CBX8 BRPF1 CBX2	1.20e-07	1480	43	15	GO:0000785
GeneOntologyCellularComponent	heterochromatin	HMGA1 HMGA2 MECP2 CBX8 CBX2	1.98e-06	101	43	5	GO:0000792
GeneOntologyCellularComponent	senescence-associated heterochromatin focus	HMGA1 HMGA2	2.47e-05	4	43	2	GO:0035985
GeneOntologyCellularComponent	PcG protein complex	JARID2 CBX8 CBX2	1.67e-04	52	43	3	GO:0031519
GeneOntologyCellularComponent	PRC1 complex	CBX8 CBX2	6.91e-04	19	43	2	GO:0035102
GeneOntologyCellularComponent	male germ cell nucleus	HMGA1 HMGA2 SCMH1	7.37e-04	86	43	3	GO:0001673
GeneOntologyCellularComponent	germ cell nucleus	HMGA1 HMGA2 SCMH1	1.62e-03	113	43	3	GO:0043073
GeneOntologyCellularComponent	chromosomal region	MKI67 PDS5B CHD4 PRKDC SLX4	1.66e-03	421	43	5	GO:0098687
GeneOntologyCellularComponent	transferase complex	JARID2 GTF2F1 HMGA1 PRKDC CBX8 BRPF1 CBX2	3.25e-03	963	43	7	GO:1990234
MousePheno	myeloid hyperplasia	HMGA1 PRKDC SCMH1	6.82e-05	34	33	3	MP:0010373
MousePheno	abnormal definitive hematopoiesis	JARID2 LHX2 ELF1 HMGA1 PRKDC SASH3 SCMH1 SLX4 CBX2	7.55e-05	808	33	9	MP:0002123
MousePheno	abnormal hemopoiesis	JARID2 LHX2 ELF1 HMGA1 PRKDC SASH3 SCMH1 SLX4 CBX2	1.01e-04	839	33	9	MP:0013693
Domain	AT_hook	PDS5B HMGA1 HMGA2 MECP2 ZBTB24 SETBP1 CBX2	1.48e-13	27	42	7	SM00384
Domain	AT_hook_DNA-bd_motif	PDS5B HMGA1 HMGA2 MECP2 ZBTB24 SETBP1 CBX2	1.48e-13	27	42	7	IPR017956
Domain	HMGI/Y_DNA-bd_CS	HMGA1 HMGA2 CCDC71 MECP2 ZBTB24 SETBP1 CBX2	4.34e-13	31	42	7	IPR000637
Domain	AT_hook	HMGA1 HMGA2 CCDC71 MECP2 ZBTB24 SETBP1	7.01e-13	16	42	6	PF02178
Domain	HMGA	HMGA1 HMGA2	1.48e-05	3	42	2	IPR000116
Domain	Chromo_domain	CHD4 CBX8 CBX2	2.07e-05	24	42	3	IPR023780
Domain	Chromo	CHD4 CBX8 CBX2	2.65e-05	26	42	3	PF00385
Domain	HMGI_Y	HMGA1 HMGA2	2.95e-05	4	42	2	PS00354
Domain	CHROMO_2	CHD4 CBX8 CBX2	3.33e-05	28	42	3	PS50013
Domain	CHROMO_1	CHD4 CBX8 CBX2	3.33e-05	28	42	3	PS00598
Domain	CBX7_C	CBX8 CBX2	4.92e-05	5	42	2	PF17218
Domain	CBX7_C	CBX8 CBX2	4.92e-05	5	42	2	IPR033773
Domain	Chromodomain-like	CHD4 CBX8 CBX2	5.01e-05	32	42	3	IPR016197
Domain	CHROMO	CHD4 CBX8 CBX2	5.50e-05	33	42	3	SM00298
Domain	Chromo/shadow_dom	CHD4 CBX8 CBX2	5.50e-05	33	42	3	IPR000953
Domain	MBT	L3MBTL2 SCMH1	1.76e-04	9	42	2	SM00561
Domain	MBT	L3MBTL2 SCMH1	1.76e-04	9	42	2	PS51079
Domain	MBT	L3MBTL2 SCMH1	2.20e-04	10	42	2	PF02820
Domain	Mbt	L3MBTL2 SCMH1	2.20e-04	10	42	2	IPR004092
Domain	Znf_FYVE_PHD	CHD4 RIMS1 PHF23 BRPF1	3.27e-04	147	42	4	IPR011011
Domain	Chromodomain_CS	CBX8 CBX2	7.38e-04	18	42	2	IPR023779
Domain	Znf_PHD-finger	CHD4 PHF23 BRPF1	7.42e-04	79	42	3	IPR019787
Domain	PWWP	HDGFL2 BRPF1	9.14e-04	20	42	2	SM00293
Domain	PHD	CHD4 PHF23 BRPF1	1.05e-03	89	42	3	SM00249
Domain	Znf_PHD	CHD4 PHF23 BRPF1	1.12e-03	91	42	3	IPR001965
Domain	PWWP	HDGFL2 BRPF1	1.21e-03	23	42	2	PF00855
Domain	PWWP_dom	HDGFL2 BRPF1	1.21e-03	23	42	2	IPR000313
Domain	ZF_PHD_2	CHD4 PHF23 BRPF1	1.27e-03	95	42	3	PS50016
Domain	ZF_PHD_1	CHD4 PHF23 BRPF1	1.31e-03	96	42	3	PS01359
Domain	PWWP	HDGFL2 BRPF1	1.32e-03	24	42	2	PS50812
Domain	Bromodomain_CS	PHIP BRPF1	1.55e-03	26	42	2	IPR018359
Domain	BROMODOMAIN_1	PHIP BRPF1	3.13e-03	37	42	2	PS00633
Domain	Bromodomain	PHIP BRPF1	3.30e-03	38	42	2	PF00439
Domain	BROMODOMAIN_2	PHIP BRPF1	3.83e-03	41	42	2	PS50014
Domain	BROMO	PHIP BRPF1	4.02e-03	42	42	2	SM00297
Domain	Pkinase_C	RPS6KB2 MAST3	4.02e-03	42	42	2	PF00433
Domain	Bromodomain	PHIP BRPF1	4.02e-03	42	42	2	IPR001487
Domain	-	PHIP BRPF1	4.02e-03	42	42	2	1.20.920.10
Pathway	REACTOME_GENE_EXPRESSION_TRANSCRIPTION	JARID2 ELF1 SRSF11 GTF2F1 CHD4 L3MBTL2 SCMH1 MECP2 CBX8 BRPF1 NOTCH3 CBX2	1.15e-06	1022	32	12	MM15436
Pathway	KEGG_MEDICUS_REFERENCE_GENE_SILENCING_BY_METHYLATION_OF_H3K27_AND_UBIQUITINATION_OF_H2AK119	JARID2 SCMH1 CBX8 CBX2	1.89e-06	40	32	4	M47917
Pathway	REACTOME_GENERIC_TRANSCRIPTION_PATHWAY	ELF1 GTF2F1 CHD4 L3MBTL2 SCMH1 MECP2 CBX8 BRPF1 NOTCH3 CBX2	4.68e-06	768	32	10	MM14851
Pathway	REACTOME_SUMOYLATION_OF_DNA_METHYLATION_PROTEINS	SCMH1 CBX8 CBX2	5.83e-06	16	32	3	M27403
Pathway	REACTOME_REGULATION_OF_PTEN_GENE_TRANSCRIPTION	CHD4 SCMH1 CBX8 CBX2	1.04e-05	61	32	4	M27811
Pathway	REACTOME_SUMOYLATION_OF_CHROMATIN_ORGANIZATION_PROTEINS	L3MBTL2 SCMH1 CBX8 CBX2	1.34e-05	65	32	4	MM15147
Pathway	REACTOME_SUMOYLATION_OF_CHROMATIN_ORGANIZATION_PROTEINS	L3MBTL2 SCMH1 CBX8 CBX2	1.91e-05	71	32	4	M27394
Pathway	KEGG_MEDICUS_REFERENCE_DEUBIQUITINATION_OF_H2AK119	SCMH1 CBX8 CBX2	2.67e-05	26	32	3	M47923
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION	ELF1 SRSF11 GTF2F1 CHD4 L3MBTL2 NOP2 SCMH1 MECP2 CBX8 BRPF1 NOTCH3 CBX2	2.72e-05	1387	32	12	M734
Pathway	REACTOME_RUNX1_INTERACTS_WITH_CO_FACTORS_WHOSE_PRECISE_EFFECT_ON_RUNX1_TARGETS_IS_NOT_KNOWN	SCMH1 CBX8 CBX2	6.06e-05	34	32	3	MM15531
Pathway	REACTOME_CELLULAR_SENESCENCE	HMGA1 HMGA2 SCMH1 CBX8 CBX2	7.51e-05	197	32	5	M27188
Pathway	REACTOME_RUNX1_INTERACTS_WITH_CO_FACTORS_WHOSE_PRECISE_EFFECT_ON_RUNX1_TARGETS_IS_NOT_KNOWN	SCMH1 CBX8 CBX2	7.83e-05	37	32	3	M27797
Pathway	REACTOME_SUMOYLATION_OF_TRANSCRIPTION_COFACTORS	SCMH1 CBX8 CBX2	9.92e-05	40	32	3	MM15000
Pathway	REACTOME_SUMOYLATION_OF_TRANSCRIPTION_COFACTORS	SCMH1 CBX8 CBX2	1.32e-04	44	32	3	M27295
Pathway	REACTOME_SUMOYLATION_OF_RNA_BINDING_PROTEINS	SCMH1 CBX8 CBX2	1.61e-04	47	32	3	M27395
Pathway	REACTOME_PTEN_REGULATION	CHD4 SCMH1 CBX8 CBX2	2.63e-04	139	32	4	M27646
Pathway	REACTOME_SUMOYLATION_OF_RNA_BINDING_PROTEINS	SCMH1 CBX8 CBX2	3.01e-04	58	32	3	MM15149
Pathway	REACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1	ELF1 SCMH1 CBX8 CBX2	3.79e-04	153	32	4	MM15522
Pathway	REACTOME_FORMATION_OF_SENESCENCE_ASSOCIATED_HETEROCHROMATIN_FOCI_SAHF	HMGA1 HMGA2	5.15e-04	15	32	2	MM14902
Pathway	REACTOME_SUMOYLATION	L3MBTL2 SCMH1 CBX8 CBX2	5.52e-04	169	32	4	MM14919
Pathway	REACTOME_INTRACELLULAR_SIGNALING_BY_SECOND_MESSENGERS	CHD4 SCMH1 CBX8 RPS6KB2 CBX2	6.43e-04	313	32	5	M27867
Pathway	REACTOME_FORMATION_OF_SENESCENCE_ASSOCIATED_HETEROCHROMATIN_FOCI_SAHF	HMGA1 HMGA2	6.65e-04	17	32	2	M27189
Pathway	REACTOME_SUMOYLATION_OF_DNA_DAMAGE_RESPONSE_AND_REPAIR_PROTEINS	SCMH1 CBX8 CBX2	6.93e-04	77	32	3	M27226
Pathway	REACTOME_SUMOYLATION	L3MBTL2 SCMH1 CBX8 CBX2	8.39e-04	189	32	4	M27214
Pathway	REACTOME_SUMOYLATION_OF_DNA_DAMAGE_RESPONSE_AND_REPAIR_PROTEINS	SCMH1 CBX8 CBX2	8.94e-04	84	32	3	MM14929
Pathway	KEGG_MEDICUS_REFERENCE_ACTIVATION_OF_PRC2.2_BY_UBIQUITINATION_OF_H2AK119_IN_GERMLINE_GENES	JARID2 L3MBTL2	1.69e-03	27	32	2	M47941
Pathway	REACTOME_TRANSCRIPTIONAL_REGULATION_BY_RUNX1	ELF1 SCMH1 CBX8 CBX2	1.93e-03	237	32	4	M27786
Pathway	REACTOME_REGULATION_OF_TP53_ACTIVITY_THROUGH_ACETYLATION	CHD4 BRPF1	1.95e-03	29	32	2	MM15340
Pathway	REACTOME_REGULATION_OF_TP53_ACTIVITY_THROUGH_ACETYLATION	CHD4 BRPF1	2.09e-03	30	32	2	M27637
Pathway	REACTOME_OXIDATIVE_STRESS_INDUCED_SENESCENCE	SCMH1 CBX8 CBX2	2.80e-03	125	32	3	M27186
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	MKI67 PDS5B ELF1 LRRC59 CHD4 L3MBTL2 NOP2 SCMH1 HDGFL2 MECP2 PHIP ZBTB24 CBX8 BRPF1 CBX2	3.54e-16	608	43	15	36089195
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	MKI67 PDS5B SRSF11 LRRC59 CHD4 HMGA1 PRKDC NOP2 HDGFL2 MECP2 PHIP SLX4 CBX8 CBX2	4.65e-12	954	43	14	36373674
Pubmed	Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.	MKI67 GTF2F1 LRRC59 CHD4 HMGA1 PRKDC NOP2 HDGFL2 MECP2	3.01e-09	441	43	9	31239290
Pubmed	Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.	PDS5B JARID2 LRRC59 HMGA1 HMGA2 HDGFL2 MECP2 PHIP RPS19BP1	5.13e-09	469	43	9	27634302
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	MKI67 PDS5B ELF1 CHD4 RIMS1 HMGA1 PRKDC NOP2 MECP2 BRPF1	2.78e-08	774	43	10	15302935
Pubmed	Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.	PDS5B JARID2 ELF1 HMGA1 HMGA2 PHF23 ZBTB24 BRPF1 TUT7 CBX2	4.15e-08	808	43	10	20412781
Pubmed	Polycomb Group Protein CBX7 Represses Cardiomyocyte Proliferation Through Modulation of the TARDBP/RBM38 Axis.	MKI67 SCMH1 CBX8 CBX2	5.42e-08	30	43	4	37158107
Pubmed	BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.	PDS5B GTF2F1 LRRC59 CHD4 HMGA1 PRKDC NOP2 HDGFL2 CBX8	1.80e-07	711	43	9	33022573
Pubmed	PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes.	L3MBTL2 SCMH1 CBX8 CBX2	1.98e-07	41	43	4	22325352
Pubmed	Direct binding of CoREST1 to SUMO-2/3 contributes to gene-specific repression by the LSD1/CoREST1/HDAC complex.	MKI67 CHD4 PRKDC NOP2 SLX4	2.10e-07	106	43	5	19394292
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	MKI67 SRSF11 LRRC59 CHD4 HMGA1 PRKDC L3MBTL2 NOP2 HDGFL2 MECP2 CBX8	3.49e-07	1294	43	11	30804502
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	MKI67 PDS5B SRSF11 LRRC59 CHD4 HMGA1 PRKDC HMGA2 NOP2 PHIP	3.72e-07	1024	43	10	24711643
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	PDS5B LHX2 SRSF11 LRRC59 CHD4 HMGA1 PRKDC HMGA2 MECP2 CBX8	6.14e-07	1082	43	10	38697112
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	MKI67 SRSF11 LRRC59 CHD4 HMGA1 NOP2 MECP2 CBX8 TUT7 CBX2 RPS19BP1	6.17e-07	1371	43	11	36244648
Pubmed	Proteomics analysis of Ring1B/Rnf2 interactors identifies a novel complex with the Fbxl10/Jhdm1B histone demethylase and the Bcl6 interacting corepressor.	L3MBTL2 SCMH1 CBX8 CBX2	7.63e-07	57	43	4	17296600
Pubmed	The core of the polycomb repressive complex is compositionally and functionally conserved in flies and humans.	SCMH1 CBX8 CBX2	9.75e-07	16	43	3	12167701
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	CYLC2 PDS5B SRSF11 LRRC59 CHD4 RIMS1 HMGA1 PRKDC HMGA2 HDGFL2 MECP2	1.01e-06	1442	43	11	35575683
Pubmed	Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.	GTF2F1 HMGA2 NOP2 MECP2 PHIP ZBTB24 CBX8 CBX2	1.10e-06	645	43	8	25281560
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	MKI67 LRRC59 PRKDC NOP2 HDGFL2 MECP2	1.30e-06	283	43	6	30585729
Pubmed	HMGA regulates the global chromatin state and neurogenic potential in neocortical precursor cells.	HMGA1 HMGA2	1.49e-06	2	43	2	22797695
Pubmed	Derepression of HMGA2 gene expression in retinoblastoma is associated with cell proliferation.	HMGA1 HMGA2	1.49e-06	2	43	2	14571323
Pubmed	Correlation of overexpression of HMGA1 and HMGA2 with poor tumor differentiation, invasion, and proliferation associated with let-7 down-regulation in retinoblastomas.	HMGA1 HMGA2	1.49e-06	2	43	2	20004941
Pubmed	Expression of high mobility group A proteins in oral leukoplakia.	HMGA1 HMGA2	1.49e-06	2	43	2	24122990
Pubmed	Differential Expression of HMGA1 and HMGA2 in pituitary neuroendocrine tumors.	HMGA1 HMGA2	1.49e-06	2	43	2	30999005
Pubmed	HMGA gene rearrangement is a recurrent somatic alteration in polypoid endometriosis.	HMGA1 HMGA2	1.49e-06	2	43	2	22221703
Pubmed	Role of High-mobility Group Protein A Isoforms and Their Clinicopathologic Significance in Primary Retinoblastoma.	HMGA1 HMGA2	1.49e-06	2	43	2	26657872
Pubmed	HMGI/Y proteins: flexible regulators of transcription and chromatin structure.	HMGA1 HMGA2	1.49e-06	2	43	2	11406267
Pubmed	The recurrent chromosomal translocation t(12;18)(q14~15;q12~21) causes the fusion gene HMGA2-SETBP1 and HMGA2 expression in lipoma and osteochondrolipoma.	HMGA2 SETBP1	1.49e-06	2	43	2	26202160
Pubmed	Identification of HMGA2 inhibitors by AlphaScreen-based ultra-high-throughput screening assays.	HMGA1 HMGA2	1.49e-06	2	43	2	33139812
Pubmed	Detection of high-mobility group proteins A1 and A2 represents a valid diagnostic marker in post-pubertal testicular germ cell tumours.	HMGA1 HMGA2	1.49e-06	2	43	2	17935122
Pubmed	Elevated 5-hydroxymethylcytosine in the Engrailed-2 (EN-2) promoter is associated with increased gene expression and decreased MeCP2 binding in autism cerebellum.	EN2 MECP2	1.49e-06	2	43	2	25290267
Pubmed	Diagnostic value of HMGAs, p53 and β-catenin in discriminating adenocarcinoma from adenoma or reactive atypia in ampulla and common bile duct biopsies.	HMGA1 HMGA2	1.49e-06	2	43	2	23530587
Pubmed	Frequency and characterization of HMGA2 and HMGA1 rearrangements in mesenchymal tumors of the lower genital tract.	HMGA1 HMGA2	1.49e-06	2	43	2	17654722
Pubmed	HMGA1 and HMGA2 protein expression in mouse spermatogenesis.	HMGA1 HMGA2	1.49e-06	2	43	2	12032866
Pubmed	The HMGA proteins: a myriad of functions (Review).	HMGA1 HMGA2	1.49e-06	2	43	2	18202751
Pubmed	Epidrug mediated re-expression of miRNA targeting the HMGA transcripts in pituitary cells.	HMGA1 HMGA2	1.49e-06	2	43	2	25557289
Pubmed	Hmga1/Hmga2 double knock-out mice display a "superpygmy" phenotype.	HMGA1 HMGA2	1.49e-06	2	43	2	24728959
Pubmed	Nonfunctioning pituitary adenomas: association of Ki-67 and HMGA-1 labeling indices with residual tumor growth.	MKI67 HMGA1	1.49e-06	2	43	2	24452592
Pubmed	Repression of HMGA2 gene expression by human cytomegalovirus involves the IE2 86-kilodalton protein and is necessary for efficient viral replication and inhibition of cyclin A transcription.	HMGA1 HMGA2	1.49e-06	2	43	2	17005673
Pubmed	Gene expressions of HMGI-C and HMGI(Y) are associated with stage and metastasis in colorectal cancer.	HMGA1 HMGA2	1.49e-06	2	43	2	19609535
Pubmed	A bead-based approach for large-scale identification of in vitro kinase substrates.	SRSF11 LRRC59 CHD4 HMGA1 HDGFL2	1.77e-06	163	43	5	22113938
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	MKI67 PDS5B GTF2F1 LRRC59 CHD4 HMGA1 PRKDC PHF23 HDGFL2	3.40e-06	1014	43	9	32416067
Pubmed	Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.	MKI67 LRRC59 HMGA1 PRKDC NOP2 PHIP	3.75e-06	340	43	6	29478914
Pubmed	Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.	MKI67 PDS5B CHD4 SCMH1 MECP2 PHIP CBX8	3.82e-06	533	43	7	30554943
Pubmed	Hmga2 is required for canonical WNT signaling during lung development.	MKI67 HMGA1 HMGA2	3.97e-06	25	43	3	24661562
Pubmed	In vitro nuclear interactome of the HIV-1 Tat protein.	PDS5B CHD4 HMGA1 HMGA2 NOP2	4.26e-06	195	43	5	19454010
Pubmed	Differential in vivo modifications of the HMGI(Y) nonhistone chromatin proteins modulate nucleosome and DNA interactions.	HMGA1 HMGA2	4.48e-06	3	43	2	10889043
Pubmed	Hmgi-c-independent Activation of MuRantes in Vivo.	HMGA1 HMGA2	4.48e-06	3	43	2	11801530
Pubmed	Mutation responsible for the mouse pygmy phenotype in the developmentally regulated factor HMGI-C.	HMGA1 HMGA2	4.48e-06	3	43	2	7651535
Pubmed	A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation.	HMGA1 HMGA2	4.48e-06	3	43	2	16901784
Pubmed	RPSAP52 lncRNA is overexpressed in pituitary tumors and promotes cell proliferation by acting as miRNA sponge for HMGA proteins.	HMGA1 HMGA2	4.48e-06	3	43	2	31076808
Pubmed	Enhancement of serum-response factor-dependent transcription and DNA binding by the architectural transcription factor HMG-I(Y).	HMGA1 HMGA2	4.48e-06	3	43	2	9545312
Pubmed	PIT1 upregulation by HMGA proteins has a role in pituitary tumorigenesis.	HMGA1 HMGA2	4.48e-06	3	43	2	22199144
Pubmed	Jarid2 regulates hematopoietic stem cell function by acting with polycomb repressive complex 2.	JARID2 PRKDC	4.48e-06	3	43	2	25645357
Pubmed	HMGA2 exhibits dRP/AP site cleavage activity and protects cancer cells from DNA-damage-induced cytotoxicity during chemotherapy.	HMGA1 HMGA2	4.48e-06	3	43	2	19465398
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	MKI67 PDS5B CHD4 HMGA1 PRKDC HMGA2 L3MBTL2 NOP2 PHIP TUT7	4.56e-06	1353	43	10	29467282
Pubmed	Hundreds of variants clustered in genomic loci and biological pathways affect human height.	HMGA1 HMGA2 SCMH1 ZBTB24 TUT7	4.59e-06	198	43	5	20881960
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	MKI67 PDS5B ELF1 GTF2F1 CHD4 HMGA1 PRKDC NOP2 MECP2	6.71e-06	1103	43	9	34189442
Pubmed	A network of heterochronic genes including Imp1 regulates temporal changes in stem cell properties.	MKI67 HMGA1 HMGA2	8.52e-06	32	43	3	24192035
Pubmed	miR-142-3p simultaneously targets HMGA1, HMGA2, HMGB1, and HMGB3 and inhibits tumorigenic properties and in-vivo metastatic potential of human cervical cancer cells.	HMGA1 HMGA2	8.94e-06	4	43	2	34973275
Pubmed	HMGA Interactome: new insights from phage display technology.	HMGA1 HMGA2	8.94e-06	4	43	2	21417337
Pubmed	Altered microRNA expression profile in human pituitary GH adenomas: down-regulation of miRNA targeting HMGA1, HMGA2, and E2F1.	HMGA1 HMGA2	8.94e-06	4	43	2	22564666
Pubmed	Lhx9: a novel LIM-homeodomain gene expressed in the developing forebrain.	LHX2 EN2	8.94e-06	4	43	2	9880598
Pubmed	Expression of Matrix Metalloproteinase-9, Pituitary Tumor Transforming Gene, High Mobility Group A 2, and Ki-67 in Adrenocorticotropic Hormone-Secreting Pituitary Tumors and Their Association with Tumor Recurrence.	MKI67 HMGA2	8.94e-06	4	43	2	29432944
Pubmed	The variant Polycomb Repressor Complex 1 component PCGF1 interacts with a pluripotency sub-network that includes DPPA4, a regulator of embryogenesis.	JARID2 HMGA1 PRKDC HMGA2 CBX8 CBX2	8.96e-06	396	43	6	26687479
Pubmed	An atlas of combinatorial transcriptional regulation in mouse and man.	JARID2 LHX2 GTF2F1 CHD4 SCMH1 MECP2 ZBTB24 BRPF1	1.05e-05	877	43	8	20211142
Pubmed	The histone acetyltransferase KAT6A is recruited to unmethylated CpG islands via a DNA binding winged helix domain.	GTF2F1 CHD4 HMGA1 L3MBTL2 NOP2 CBX8	1.20e-05	417	43	6	36537216
Pubmed	Genetic determinants of height growth assessed longitudinally from infancy to adulthood in the northern Finland birth cohort 1966.	HMGA1 HMGA2 SCMH1	1.33e-05	37	43	3	19266077
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	MKI67 PDS5B LRRC59 CHD4 HMGA1 PRKDC NOP2	1.41e-05	652	43	7	31180492
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	MKI67 PDS5B CHD4 PRKDC NOP2 PHIP TUT7	1.43e-05	653	43	7	22586326
Pubmed	Distinct organization of DNA complexes of various HMGI/Y family proteins and their modulation upon mitotic phosphorylation.	HMGA1 HMGA2	1.49e-05	5	43	2	11034995
Pubmed	A potential role for somatostatin signaling in regulating retinal neurogenesis.	MKI67 LHX2	1.49e-05	5	43	2	34040115
Pubmed	Regulation of cell-type-specific interleukin-2 receptor alpha-chain gene expression: potential role of physical interactions between Elf-1, HMG-I(Y), and NF-kappa B family proteins.	ELF1 HMGA1	1.49e-05	5	43	2	7862168
Pubmed	The AT-hook of the chromatin architectural transcription factor high mobility group A1a is arginine-methylated by protein arginine methyltransferase 6.	HMGA1 HMGA2	1.49e-05	5	43	2	16293633
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	MKI67 LRRC59 CHD4 HMGA1 PRKDC L3MBTL2 NOP2 HDGFL2	1.65e-05	934	43	8	33916271
Pubmed	Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers.	CHD4 HDGFL2 CBX8 CBX2	1.71e-05	124	43	4	20850016
Pubmed	Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.	PDS5B HMGA1 HMGA2 SCMH1	1.99e-05	129	43	4	23563607
Pubmed	Hes5 regulates the transition timing of neurogenesis and gliogenesis in mammalian neocortical development.	HMGA1 HMGA2	2.23e-05	6	43	2	28851724
Pubmed	MiRNA-155 regulates cumulus cells function, oocyte maturation, and blastocyst formation.	JARID2 MECP2	2.23e-05	6	43	2	32507875
Pubmed	Rn7SK small nuclear RNA is involved in neuronal differentiation.	MKI67 HMGA1	2.23e-05	6	43	2	29091296
Pubmed	Structural and histone binding ability characterizations of human PWWP domains.	HDGFL2 BRPF1	2.23e-05	6	43	2	21720545
Pubmed	A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.	MKI67 LHX2 ELF1 CHD4 PHIP BRPF1 TUT7	2.42e-05	709	43	7	22988430
Pubmed	Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins.	HMGA1 HMGA2 NOP2	2.57e-05	46	43	3	16791210
Pubmed	The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.	MKI67 CHD4 PRKDC L3MBTL2 NOP2 RPS19BP1	2.74e-05	483	43	6	36912080
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	MKI67 PDS5B SRSF11 LRRC59 CHD4 PRKDC CCDC71 NOP2 PHIP	2.76e-05	1318	43	9	30463901
Pubmed	The functional interactome landscape of the human histone deacetylase family.	MKI67 CHD4 PRKDC NOP2 PHIP	2.84e-05	289	43	5	23752268
Pubmed	Jarid2 regulates mouse epidermal stem cell activation and differentiation.	MKI67 JARID2	3.12e-05	7	43	2	21811233
Pubmed	HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.	MKI67 CHD4 NOP2 HDGFL2	3.41e-05	148	43	4	32538781
Pubmed	Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.	MKI67 SRSF11 GTF2F1 CHD4 NOP2 HDGFL2	3.56e-05	506	43	6	30890647
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	MKI67 PDS5B CHD4 PRKDC NOP2 CBX8 TUT7	3.73e-05	759	43	7	35915203
Pubmed	TTF-1/NKX2-1 binds to DDB1 and confers replication stress resistance to lung adenocarcinomas.	CHD4 HMGA1 PRKDC MECP2	3.79e-05	152	43	4	28192407
Pubmed	Recognition and specificity determinants of the human cbx chromodomains.	CBX8 CBX2	4.16e-05	8	43	2	21047797
Pubmed	Paracrine effect of regulatory T cells promotes cardiomyocyte proliferation during pregnancy and after myocardial infarction.	MKI67 PRKDC	4.16e-05	8	43	2	29946151
Pubmed	Growth factor-induced delayed early response genes.	HMGA1 HMGA2	4.16e-05	8	43	2	1508193
Pubmed	HIV-1 integration: an interplay between HIV-1 integrase, cellular and viral proteins.	HMGA1 PRKDC	4.16e-05	8	43	2	15875659
Pubmed	Model of full-length HIV-1 integrase complexed with viral DNA as template for anti-HIV drug design.	HMGA1 PRKDC	4.16e-05	8	43	2	16075307
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	JARID2 CHD4 BRPF1 CBX2	4.30e-05	157	43	4	30186101
Pubmed	Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression.	CHD4 HDGFL2 RPS19BP1	4.66e-05	56	43	3	26919559
Pubmed	Human transcription factor protein interaction networks.	MKI67 LHX2 ELF1 LRRC59 L3MBTL2 PHF23 NOP2 SLX4 CBX2	5.19e-05	1429	43	9	35140242
Pubmed	ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.	LRRC59 CHD4 NOP2 MECP2 PHIP	5.34e-05	330	43	5	33301849
Interaction	H3C1 interactions	MKI67 CYLC2 PDS5B GTF2F1 LRRC59 CHD4 HMGA1 PRKDC HMGA2 L3MBTL2 NOP2 HDGFL2 MECP2 PHIP ZBTB24 CBX8 BRPF1 CBX2	9.12e-14	901	43	18	int:H3C1
Interaction	CHAMP1 interactions	MKI67 CHD4 HMGA1 HMGA2 L3MBTL2 HDGFL2 MECP2 SLX4 CBX8 RPS19BP1	5.23e-13	148	43	10	int:CHAMP1
Interaction	H3C3 interactions	MKI67 PDS5B LRRC59 CHD4 L3MBTL2 NOP2 SCMH1 HDGFL2 MECP2 PHIP ZBTB24 CBX8 BRPF1 CBX2	9.90e-13	495	43	14	int:H3C3
Interaction	POGZ interactions	LHX2 ELF1 CHD4 HMGA1 HMGA2 L3MBTL2 HDGFL2 MECP2 ZBTB24 SLX4 RPS19BP1	6.55e-12	265	43	11	int:POGZ
Interaction	H2BC8 interactions	MKI67 PDS5B ELF1 GTF2F1 CHD4 HMGA1 HMGA2 HDGFL2 MECP2 PHIP ZBTB24 CBX8 BRPF1 CBX2	7.59e-12	576	43	14	int:H2BC8
Interaction	H3-3A interactions	MKI67 PDS5B ELF1 CHD4 HMGA1 PRKDC CCDC71 L3MBTL2 SCMH1 HDGFL2 MECP2 PHIP CBX8 BRPF1 CBX2	1.78e-11	749	43	15	int:H3-3A
Interaction	CENPA interactions	PDS5B GTF2F1 HMGA1 PRKDC NOP2 HDGFL2 MECP2 PHIP CBX8 BRPF1 CBX2	2.86e-10	377	43	11	int:CENPA
Interaction	CBX3 interactions	MKI67 PDS5B CHD4 HMGA1 HMGA2 CCDC71 L3MBTL2 HDGFL2 MECP2 PHIP SLX4 CBX8 RPS19BP1	5.05e-10	646	43	13	int:CBX3
Interaction	PARP1 interactions	MKI67 PDS5B GTF2F1 CHD4 HMGA1 PRKDC HMGA2 L3MBTL2 NOP2 HDGFL2 MECP2 PHIP ZBTB24 SLX4 CBX8 MAST3 CBX2	5.34e-10	1316	43	17	int:PARP1
Interaction	TOP1 interactions	MKI67 LHX2 SRSF11 GTF2F1 LRRC59 CHD4 PRKDC HMGA2 NOP2 MECP2 CBX8 BRPF1 CBX2	1.25e-09	696	43	13	int:TOP1
Interaction	H2BC21 interactions	MKI67 PDS5B CHD4 HMGA1 PRKDC CCDC71 NOP2 SASH3 MECP2 PHIP CBX8 BRPF1 CBX2	1.25e-09	696	43	13	int:H2BC21
Interaction	XPC interactions	MKI67 LRRC59 HMGA1 HMGA2 CCDC71 PHF23 MECP2 TUT7	2.23e-09	168	43	8	int:XPC
Interaction	ZNF512 interactions	MKI67 LHX2 CHD4 HMGA1 CCDC71 NOP2 ZBTB24 IL17B TUT7	2.90e-09	256	43	9	int:ZNF512
Interaction	SMC5 interactions	MKI67 PDS5B SRSF11 LRRC59 CHD4 HMGA1 PRKDC NOP2 HDGFL2 MECP2 PHIP SLX4 CBX8 CBX2	1.02e-08	1000	43	14	int:SMC5
Interaction	GTPBP4 interactions	MKI67 LHX2 LRRC59 CHD4 PRKDC NOP2 MECP2 SLX4 CBX8 IL17B	2.39e-08	443	43	10	int:GTPBP4
Interaction	H3C14 interactions	CHD4 HDGFL2 MECP2 PHIP CBX8 BRPF1 CBX2	3.71e-08	156	43	7	int:H3C14
Interaction	NUMA1 interactions	MKI67 LRRC59 CHD4 HMGA1 HMGA2 PHIP SLX4 CBX8 BRPF1 CBX2	4.08e-08	469	43	10	int:NUMA1
Interaction	CBX1 interactions	MKI67 CHD4 HMGA1 CCDC71 L3MBTL2 HDGFL2 MECP2 RPS19BP1	1.48e-07	288	43	8	int:CBX1
Interaction	SMC3 interactions	MKI67 PDS5B LHX2 CHD4 PRKDC L3MBTL2 NOP2 MECP2 SLX4	1.60e-07	408	43	9	int:SMC3
Interaction	SMC1A interactions	MKI67 PDS5B LHX2 ELF1 CHD4 PRKDC L3MBTL2 MECP2 SLX4	1.97e-07	418	43	9	int:SMC1A
Interaction	HMGA1 interactions	ELF1 CHD4 HMGA1 PRKDC HMGA2 CCDC71 MECP2 PHIP CBX2	2.01e-07	419	43	9	int:HMGA1
Interaction	BCOR interactions	LHX2 HMGA1 L3MBTL2 SCMH1 PHIP SLX4 CBX8 CBX2	2.13e-07	302	43	8	int:BCOR
Interaction	EWSR1 interactions	MKI67 JARID2 SRSF11 LRRC59 CHD4 HMGA1 EN2 SCMH1 HDGFL2 MECP2 ZBTB24 RPS6KB2	2.68e-07	906	43	12	int:EWSR1
Interaction	ZNF330 interactions	PDS5B GTF2F1 HMGA1 NOP2 MECP2 PHIP CBX8 BRPF1 CBX2	3.40e-07	446	43	9	int:ZNF330
Interaction	CSNK2A1 interactions	SRSF11 GTF2F1 LRRC59 CHD4 HMGA1 PRKDC HMGA2 HDGFL2 MECP2 CBX8 MAST3 CBX2	4.76e-07	956	43	12	int:CSNK2A1
Interaction	CSNK2B interactions	LRRC59 CHD4 HDGFL2 MECP2 CBX8 BRPF1 NOTCH3 RPS6KB2 MAST3 CBX2	5.83e-07	625	43	10	int:CSNK2B
Interaction	DDX23 interactions	PDS5B SRSF11 GTF2F1 LRRC59 CHD4 NOP2 HDGFL2 MECP2 BRPF1	6.28e-07	480	43	9	int:DDX23
Interaction	MGA interactions	MKI67 LHX2 ELF1 L3MBTL2 SLX4 CBX8 CBX2	6.96e-07	240	43	7	int:MGA
Interaction	NPM1 interactions	MKI67 SRSF11 LRRC59 CHD4 HMGA1 PRKDC HMGA2 NOP2 MECP2 SLX4 CBX8 RPS6KB2 CBX2	7.64e-07	1201	43	13	int:NPM1
Interaction	BCORL1 interactions	LHX2 L3MBTL2 SCMH1 CBX8 CBX2	1.01e-06	85	43	5	int:BCORL1
Interaction	XRCC5 interactions	CHD4 HMGA1 PRKDC HMGA2 MECP2 PHIP BRPF1 RPS6KB2 MAST3	1.13e-06	515	43	9	int:XRCC5
Interaction	TAF3 interactions	ELF1 HMGA1 HMGA2 MECP2 PHIP	1.20e-06	88	43	5	int:TAF3
Interaction	HDLBP interactions	MKI67 SRSF11 LRRC59 CHD4 PRKDC NOP2 SLX4 CBX8 TUT7 MAST3 CBX2	1.24e-06	855	43	11	int:HDLBP
Interaction	SMARCC1 interactions	LHX2 GTF2F1 CHD4 HMGA1 L3MBTL2 HDGFL2 MECP2 SLX4	1.31e-06	384	43	8	int:SMARCC1
Interaction	SSRP1 interactions	CHD4 PRKDC HMGA2 CCDC71 NOP2 HDGFL2 MECP2 PHIP BRPF1 CBX2	1.34e-06	685	43	10	int:SSRP1
Interaction	RNF2 interactions	MKI67 PDS5B CHD4 HMGA1 L3MBTL2 NOP2 SCMH1 PHIP CBX8 CBX2 RPS19BP1	1.41e-06	866	43	11	int:RNF2
Interaction	RPS6 interactions	MKI67 PDS5B LRRC59 CHD4 NOP2 MECP2 PHIP ZBTB24 SLX4 CBX8 RPS6KB2	1.54e-06	874	43	11	int:RPS6
Interaction	ZMYM4 interactions	MKI67 LHX2 ELF1 CHD4 HMGA1 SLX4	1.61e-06	171	43	6	int:ZMYM4
Interaction	RPL10 interactions	MKI67 LRRC59 CHD4 NOP2 MECP2 PHIP ZBTB24 SLX4 CBX8 RPS6KB2	1.67e-06	702	43	10	int:RPL10
Interaction	OBSL1 interactions	MKI67 PDS5B SRSF11 LRRC59 CHD4 HMGA1 PRKDC HMGA2 NOP2 PHIP TUT7	2.09e-06	902	43	11	int:OBSL1
Interaction	WDR5 interactions	PDS5B GTF2F1 LRRC59 CHD4 HMGA1 PRKDC L3MBTL2 NOP2 HDGFL2 SLX4 CBX8 SETBP1	2.11e-06	1101	43	12	int:WDR5
Interaction	ZNF644 interactions	LHX2 ELF1 CHD4 HMGA1 CCDC71 SLX4	2.62e-06	186	43	6	int:ZNF644
Interaction	XRCC6 interactions	MKI67 GTF2F1 LRRC59 CHD4 HMGA1 PRKDC HMGA2 NOP2 HDGFL2 MECP2 MAST3	2.76e-06	928	43	11	int:XRCC6
Interaction	BRD2 interactions	JARID2 CHD4 HMGA2 HDGFL2 MECP2 PHIP SLX4 BRPF1	2.98e-06	429	43	8	int:BRD2
Interaction	CHD4 interactions	MKI67 CHD4 HMGA1 PRKDC L3MBTL2 NOP2 HDGFL2 MECP2 PHIP SLX4 RPS19BP1	3.06e-06	938	43	11	int:CHD4
Interaction	MYCN interactions	MKI67 PDS5B SRSF11 LRRC59 CHD4 HMGA1 PRKDC NOP2 HDGFL2 MECP2 CBX8 TUT7 RPS19BP1	3.42e-06	1373	43	13	int:MYCN
Interaction	ZNF512B interactions	LHX2 CHD4 HMGA2 CCDC71 MECP2 SLX4	3.54e-06	196	43	6	int:ZNF512B
Interaction	RPL4 interactions	MKI67 LRRC59 CHD4 NOP2 HDGFL2 MECP2 SLX4 IL17B RPS6KB2 TUT7	3.56e-06	764	43	10	int:RPL4
Interaction	ADNP interactions	CHD4 L3MBTL2 HDGFL2 MECP2 SLX4 RPS19BP1	3.87e-06	199	43	6	int:ADNP
Interaction	H2BC9 interactions	PDS5B SRSF11 CHD4 HMGA1 HMGA2 NOP2 HDGFL2 SETBP1	3.97e-06	446	43	8	int:H2BC9
Interaction	PSIP1 interactions	CHD4 HMGA1 HMGA2 HDGFL2 MECP2 SETBP1	4.59e-06	205	43	6	int:PSIP1
Interaction	IWS1 interactions	CHD4 HMGA1 CCDC71 HDGFL2 MECP2	4.68e-06	116	43	5	int:IWS1
Interaction	PCGF1 interactions	HMGA1 HMGA2 L3MBTL2 SCMH1 CBX8 CBX2	4.99e-06	208	43	6	int:PCGF1
Interaction	SMARCA4 interactions	LHX2 GTF2F1 CHD4 HMGA1 L3MBTL2 MECP2 PHIP SLX4	5.15e-06	462	43	8	int:SMARCA4
Interaction	H2BC13 interactions	MKI67 PDS5B JARID2 CHD4 HMGA1 HMGA2	5.27e-06	210	43	6	int:H2BC13
Interaction	FBL interactions	MKI67 CHD4 NOP2 MECP2 PHIP SLX4 CBX8 TUT7 RPS19BP1	6.58e-06	639	43	9	int:FBL
Interaction	WIZ interactions	LHX2 CHD4 HMGA2 CCDC71 MECP2 SLX4	6.88e-06	220	43	6	int:WIZ
Interaction	TERF2 interactions	MKI67 CYLC2 SRSF11 HMGA1 HDGFL2 MECP2 SLX4	6.99e-06	340	43	7	int:TERF2
Interaction	RPS8 interactions	MKI67 LRRC59 CHD4 NOP2 MECP2 ZBTB24 SLX4 CBX8 RPS6KB2	7.46e-06	649	43	9	int:RPS8
Interaction	HMGB1 interactions	CYLC2 LHX2 HMGA1 PRKDC HMGA2 PHF23 NOP2 MECP2	7.46e-06	486	43	8	int:HMGB1
Interaction	SMARCA2 interactions	MKI67 LHX2 ELF1 GTF2F1 CHD4 HDGFL2 MECP2	7.84e-06	346	43	7	int:SMARCA2
Interaction	MECP2 interactions	MKI67 PDS5B LHX2 SRSF11 LRRC59 CHD4 HMGA1 PRKDC HMGA2 NOP2 MECP2 CBX8	1.05e-05	1287	43	12	int:MECP2
Interaction	DDX54 interactions	MKI67 CHD4 NOP2 MECP2 SLX4 CBX8 IL17B	1.05e-05	362	43	7	int:DDX54
Interaction	RPL18 interactions	MKI67 LRRC59 CHD4 NOP2 MECP2 SLX4 IL17B RPS6KB2	1.09e-05	512	43	8	int:RPL18
Interaction	PHF10 interactions	MKI67 LHX2 ELF1 HMGA1 L3MBTL2	1.13e-05	139	43	5	int:PHF10
Interaction	HMGA2 interactions	MKI67 HMGA1 PRKDC HMGA2 MECP2	1.17e-05	140	43	5	int:HMGA2
Interaction	NKRF interactions	MKI67 CHD4 MECP2 PHIP SLX4 IL17B	1.24e-05	244	43	6	int:NKRF
Interaction	GTF2I interactions	CHD4 HMGA1 PRKDC HMGA2 SLX4 RPS6KB2 CBX2	1.28e-05	373	43	7	int:GTF2I
Interaction	EIF2S2 interactions	PDS5B HMGA1 PRKDC MECP2 RPS6KB2 MAST3	1.33e-05	247	43	6	int:EIF2S2
Interaction	RPL13 interactions	LRRC59 CHD4 NOP2 HDGFL2 MECP2 ZBTB24 SLX4 RPS6KB2 TUT7	1.37e-05	700	43	9	int:RPL13
Interaction	RPL8 interactions	LRRC59 CHD4 NOP2 MECP2 ZBTB24 SLX4 IL17B RPS6KB2	1.58e-05	539	43	8	int:RPL8
Interaction	H1-0 interactions	MKI67 ELF1 CHD4 HMGA1 SLX4 CBX8	1.63e-05	256	43	6	int:H1-0
Interaction	CSNK2A2 interactions	MKI67 CHD4 HMGA1 HMGA2 NOP2 HDGFL2 CBX8 BRPF1 CBX2	1.67e-05	718	43	9	int:CSNK2A2
Interaction	SYNCRIP interactions	MKI67 NHS LRRC59 CHD4 HMGA1 HMGA2 NOP2 MECP2 TUT7	1.73e-05	721	43	9	int:SYNCRIP
Interaction	PHC2 interactions	SCMH1 MECP2 ZBTB24 CBX8 CBX2	1.80e-05	153	43	5	int:PHC2
Interaction	RPL24 interactions	LRRC59 CHD4 HMGA1 PRKDC HDGFL2 MECP2 RPS6KB2	1.91e-05	397	43	7	int:RPL24
Interaction	RPL14 interactions	GTF2F1 LRRC59 CHD4 NOP2 MECP2 ZBTB24 SLX4 RPS6KB2	1.92e-05	554	43	8	int:RPL14
Interaction	ASH2L interactions	MKI67 PDS5B LHX2 ELF1 HMGA1 SETBP1	1.98e-05	265	43	6	int:ASH2L
Interaction	FKBP11 interactions	HDGFL2 MECP2 CBX8	2.01e-05	25	43	3	int:FKBP11
Interaction	CDC14B interactions	GTF2F1 HMGA1 CBX8 CBX2 RPS19BP1	2.10e-05	158	43	5	int:CDC14B
Interaction	MSH6 interactions	LRRC59 CHD4 PRKDC MECP2 SLX4 RPS6KB2	2.25e-05	271	43	6	int:MSH6
Interaction	MDC1 interactions	MKI67 CHD4 HMGA1 PRKDC HMGA2 SLX4 CBX2	2.50e-05	414	43	7	int:MDC1
Interaction	ANXA2 interactions	PDS5B CHD4 HMGA1 PRKDC MECP2 SLX4 RPS6KB2	2.70e-05	419	43	7	int:ANXA2
Interaction	PCGF6 interactions	ELF1 CHD4 L3MBTL2 CBX8 CBX2	3.08e-05	171	43	5	int:PCGF6
Interaction	H2AX interactions	MKI67 CHD4 HMGA1 PRKDC SCMH1 HDGFL2 ZBTB24 CBX2	3.13e-05	593	43	8	int:H2AX
Interaction	ACTL6A interactions	CHD4 HMGA1 PRKDC HDGFL2 MECP2 SLX4	3.22e-05	289	43	6	int:ACTL6A
Interaction	RPL26L1 interactions	MKI67 LHX2 LRRC59 NOP2 MECP2 IL17B TUT7	3.23e-05	431	43	7	int:RPL26L1
Interaction	RPS5 interactions	MKI67 LRRC59 CHD4 NOP2 MECP2 SLX4 RPS6KB2	3.23e-05	431	43	7	int:RPS5
Interaction	PRPF3 interactions	MKI67 GTF2F1 LRRC59 CHD4 MECP2 SLX4	3.35e-05	291	43	6	int:PRPF3
Interaction	PHC1 interactions	L3MBTL2 SCMH1 CBX8 CBX2	3.36e-05	86	43	4	int:PHC1
Interaction	ZC3HAV1 interactions	SRSF11 LRRC59 CHD4 NOP2 CBX8 IL17B RPS6KB2 MAST3	3.65e-05	606	43	8	int:ZC3HAV1
Interaction	RPL22 interactions	GTF2F1 LRRC59 CHD4 HDGFL2 MECP2 ZBTB24 CBX8	3.68e-05	440	43	7	int:RPL22
Interaction	NCL interactions	GTF2F1 CHD4 HMGA1 HDGFL2 MECP2 SLX4 CBX8 IL17B RPS6KB2	3.84e-05	798	43	9	int:NCL
Interaction	PCGF3 interactions	L3MBTL2 SCMH1 CBX8 CBX2	4.02e-05	90	43	4	int:PCGF3
Interaction	STK38 interactions	PDS5B JARID2 GTF2F1 PRKDC MECP2	4.14e-05	182	43	5	int:STK38
Interaction	SMARCD2 interactions	MKI67 LHX2 CHD4 HDGFL2 MECP2	4.25e-05	183	43	5	int:SMARCD2
Interaction	EP400 interactions	MKI67 LHX2 ELF1 MECP2 SLX4	4.37e-05	184	43	5	int:EP400
Interaction	E2F6 interactions	LHX2 ELF1 L3MBTL2 CBX8 CBX2	4.48e-05	185	43	5	int:E2F6
Interaction	YY1 interactions	MKI67 LHX2 ELF1 PRKDC L3MBTL2 MECP2 SLX4	4.49e-05	454	43	7	int:YY1
Interaction	NUP43 interactions	MKI67 PDS5B ELF1 L3MBTL2 MECP2 PHIP SLX4 CBX8	4.55e-05	625	43	8	int:NUP43
Cytoband	Ensembl 112 genes in cytogenetic band chr19p13	COL5A3 PRR22 GTF2F1 HDGFL2 NOTCH3 MAST3	9.48e-05	797	43	6	chr19p13
Cytoband	19p13.3	PRR22 GTF2F1 HDGFL2	1.44e-03	237	43	3	19p13.3
Cytoband	12p13	CHD4 NOP2	1.66e-03	64	43	2	12p13
Cytoband	Ensembl 112 genes in cytogenetic band chr6q14	LCA5 PHIP	3.77e-03	97	43	2	chr6q14
Cytoband	17q25.3	CBX8 CBX2	4.08e-03	101	43	2	17q25.3
GeneFamily	Chromobox family	CBX8 CBX2	6.91e-05	8	29	2	976
GeneFamily	Sterile alpha motif domain containing\|MBT domain containing	L3MBTL2 SCMH1	8.88e-05	9	29	2	1263
GeneFamily	Canonical high mobility group	HMGA1 HMGA2	1.35e-04	11	29	2	511
GeneFamily	PHD finger proteins	CHD4 PHF23 BRPF1	3.97e-04	90	29	3	88
GeneFamily	Sterile alpha motif domain containing	SASH3 SCMH1	8.73e-03	88	29	2	760
GeneFamily	Basic leucine zipper proteins\|BTB domain containing	ZBTB24 SLX4	1.94e-02	134	29	2	861
GeneFamily	PDZ domain containing	RIMS1 MAST3	2.46e-02	152	29	2	1220
Coexpression	PUJANA_ATM_PCC_NETWORK	MKI67 PHTF2 PDS5B JARID2 ELF1 SRSF11 RIMS1 PRKDC EN2 NOP2 SASH3 PHIP ZBTB24	2.11e-07	1394	43	13	M9585
Coexpression	DAZARD_RESPONSE_TO_UV_NHEK_DN	MKI67 JARID2 ELF1 HMGA2 MECP2 PHIP ZBTB24	5.43e-07	300	43	7	M8702
Coexpression	GSE2405_0H_VS_1.5H_A_PHAGOCYTOPHILUM_STIM_NEUTROPHIL_DN	PHF23 SASH3 SLX4 RPS6KB2 MAST3 CBX2	8.57e-07	199	43	6	M6211
Coexpression	DAZARD_UV_RESPONSE_CLUSTER_G6	MKI67 JARID2 HMGA2 MECP2 PHIP	3.93e-06	145	43	5	M1810
Coexpression	GSE9988_LPS_VS_CTRL_TREATED_MONOCYTE_DN	PHF23 SASH3 BRPF1 MAST3 RPS19BP1	1.87e-05	200	43	5	M5859
Coexpression	HOWARD_DENDRITIC_CELL_INACT_MONOV_INFLUENZA_A_INDONESIA_05_2005_H5N1_AGE_18_49YO_1DY_DN	SOX12 NOTCH3 CBX2	4.20e-05	41	43	3	M41210
Coexpression	MCCOLLUM_GELDANAMYCIN_RESISTANCE_DN	HMGA2 NOTCH3	5.49e-05	7	43	2	M14386
Coexpression	LUI_THYROID_CANCER_CLUSTER_1	SRSF11 CHD4 PHIP	8.59e-05	52	43	3	M2135
Coexpression	OCONNOR_PBMC_MENVEO_ACWYVAX_AGE_30_70YO_7DY_AFTER_SECOND_DOSE_VS_7DY_AFTER_FIRST_DOSE_UP	GTF2F1 CHD4 HMGA1 SASH3	9.63e-05	146	43	4	M41190
Coexpression	BIDUS_METASTASIS_DN	NHS GTF2F1 SASH3 TUT7	1.18e-04	154	43	4	M8818
Coexpression	GSE7218_IGM_VS_IGG_SIGNAL_THGOUGH_ANTIGEN_BCELL_UP	MKI67 PHTF2 L3MBTL2 NOP2	2.49e-04	187	43	4	M6807
Coexpression	GSE45365_WT_VS_IFNAR_KO_CD11B_DC_UP	SOX12 L3MBTL2 NOP2 SCMH1	2.98e-04	196	43	4	M9971
Coexpression	GSE9988_ANTI_TREM1_AND_LPS_VS_VEHICLE_TREATED_MONOCYTES_DN	PHF23 SASH3 SLX4 MAST3	3.04e-04	197	43	4	M5879
Coexpression	GSE22886_NAIVE_CD8_TCELL_VS_NKCELL_DN	JARID2 SASH3 PHIP TUT7	3.04e-04	197	43	4	M4421
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_CD8_TCELL_DN	MKI67 PHTF2 PDS5B NOP2	3.16e-04	199	43	4	M3588
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_IL12_CD8_TCELL_DN	MKI67 PDS5B LRRC59 NOP2	3.16e-04	199	43	4	M3591
Coexpression	GSE17721_LPS_VS_POLYIC_6H_BMDC_DN	HMGA1 EN2 SCMH1 PHIP	3.16e-04	199	43	4	M3809
Coexpression	HE_LIM_SUN_FETAL_LUNG_C0_EARLY_FIBROBLAST	MKI67 HMGA1 HMGA2	3.21e-04	81	43	3	M45667
Coexpression	GSE14308_TH17_VS_NATURAL_TREG_DN	CHD4 PHF23 SCMH1 ZBTB24	3.22e-04	200	43	4	M3390
Coexpression	GSE9988_ANTI_TREM1_VS_CTRL_TREATED_MONOCYTES_DN	PHF23 SASH3 PHIP MAST3	3.22e-04	200	43	4	M5851
Coexpression	HALLMARK_E2F_TARGETS	MKI67 PDS5B HMGA1 PRKDC	3.22e-04	200	43	4	M5925
Coexpression	GSE23505_IL6_IL1_VS_IL6_IL1_TGFB_TREATED_CD4_TCELL_UP	JARID2 SRSF11 PRKDC SASH3	3.22e-04	200	43	4	M7872
Coexpression	GSE6259_FLT3L_INDUCED_33D1_POS_DC_VS_BCELL_DN	MKI67 PRKDC PHIP MAST3	3.22e-04	200	43	4	M6745
ToppCell	COVID-19-Heart-Pericyte\|Heart / Disease (COVID-19 only), tissue and cell type	NHS COL5A3 RIMS1 NOTCH3 SETBP1	9.19e-07	184	43	5	21790cdfa3b4036ad413fd44b94e31563116f25f
ToppCell	PCW_07-8.5\|World / Celltypes from embryonic and fetal-stage human lung	MKI67 RIMS1 HMGA2 PHF23 ZBTB24	1.19e-06	194	43	5	5759c83308df017f1faae248e9b85388e25254f0
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW10\|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.	MKI67 HMGA1 HMGA2 PHIP CBX2	1.39e-06	200	43	5	7c495030e6566b81d97b5516d1972e335ce5ed8c
ToppCell	COVID-19-kidney-REN+Pericyte\|COVID-19 / Disease (COVID-19 only), tissue and cell type	PHTF2 NHS NOTCH3 SETBP1	2.37e-05	174	43	4	8393f0b43c767839c1630bcb952d62b42efc788d
ToppCell	COVID-19_Mild-Neu_3\|COVID-19_Mild / 5 Neutrophil clusters in COVID-19 patients	NHS SLX4 BRPF1 MAST3	2.48e-05	176	43	4	2049767fd591045cfcf5b1071d80798e52843f27
ToppCell	droplet-Thymus-nan-24m-Lymphocytic-DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MKI67 PRR22 SLX4 NOTCH3	2.77e-05	181	43	4	3fe648db1cb8326066d8bde3ca1287c5c9af19bd
ToppCell	droplet-Thymus-nan-24m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MKI67 PRR22 SLX4 NOTCH3	2.83e-05	182	43	4	39f9b3eb22293cc27c6e175702c77d1eeb24fdc9
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_myocytic-mes_immature_ASM2_(12)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	NHS RIMS1 HMGA2 IL17B	2.89e-05	183	43	4	e84539978ab4de42e19186aed00f24bb50cbc21f
ToppCell	Control-Epithelial-Club\|Epithelial / Disease state, Lineage and Cell class	NHS RIMS1 NOTCH3 TUT7	3.01e-05	185	43	4	6814b3c94c7558443c038a227b5c8563d2cfeac4
ToppCell	droplet-Tongue-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ELF1 SRSF11 CHD4 PHIP	3.21e-05	188	43	4	d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_myocytic\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	NHS RIMS1 IL17B NOTCH3	3.27e-05	189	43	4	f75cebd4c3e54e297557449ba67ccc8d1a2a14f5
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL5A3 RIMS1 IL17B NOTCH3	3.27e-05	189	43	4	7ab1cfc1657277858339f7258a0c4ae9cb42fdf8
ToppCell	10x_3'_v2v3-Non-neoplastic-Vascular-Mural_cell-SMC_COL-D\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	SOX12 COL5A3 HMGA2 NOTCH3	3.70e-05	195	43	4	78cfde21dde4b877fc76c8b0d5ddaabe44b912d7
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW10\|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.	MKI67 HMGA1 HMGA2 CBX2	4.00e-05	199	43	4	8e72efcd421639ac36ed036ee13f13de070d361f
Computational	Genes in the cancer module 123.	LHX2 CHD4 HMGA2 EN2 MECP2 ZBTB24	3.41e-05	247	28	6	MODULE_123
Drug	U0125; Down 200; 1uM; PC3; HG-U133A	PDS5B ELF1 SASH3 MECP2 TUT7 MAST3	1.82e-06	197	43	6	663_DN
Drug	Monocrotaline [315-22-0]; Down 200; 12.2uM; MCF7; HT_HG-U133A	SRSF11 SCMH1 MECP2 CBX8 BRPF1 NOTCH3	1.87e-06	198	43	6	2749_DN
Drug	Mometasone furoate [83919-23-7]; Down 200; 7.6uM; MCF7; HT_HG-U133A	PHTF2 PDS5B LHX2 SRSF11 NOTCH3	2.65e-05	187	43	5	2896_DN
Drug	Sulfamethazine sodium salt [1981-58-4]; Down 200; 13.4uM; PC3; HT_HG-U133A	PHTF2 ELF1 SRSF11 GTF2F1 CHD4	2.86e-05	190	43	5	4322_DN
Drug	Strophantine octahydrate [11018-89-6]; Down 200; 5.4uM; PC3; HT_HG-U133A	PHTF2 LHX2 HMGA2 EN2 CBX8	2.86e-05	190	43	5	6680_DN
Drug	Ethoxyquin [91-53-2]; Down 200; 18.4uM; PC3; HT_HG-U133A	ELF1 SRSF11 GTF2F1 CHD4 NOTCH3	3.08e-05	193	43	5	4321_DN
Drug	5152487; Down 200; 10uM; MCF7; HT_HG-U133A_EA	PDS5B SOX12 ELF1 GTF2F1 MAST3	3.32e-05	196	43	5	896_DN
Disease	body height at birth	HMGA1 HMGA2 PHF23	2.37e-05	40	41	3	EFO_0006784
Disease	autistic disorder (is_implicated_in)	JARID2 EN2 MECP2	2.75e-05	42	41	3	DOID:12849 (is_implicated_in)
Disease	inositol measurement	NOTCH3 SETBP1	1.70e-04	14	41	2	EFO_0010504
Disease	Neurodevelopmental Disorders	RIMS1 MECP2 SETBP1	2.96e-04	93	41	3	C1535926
Disease	waist circumference	LHX2 HMGA1 HMGA2 PHIP SETBP1	3.09e-04	429	41	5	EFO_0004342
Disease	Autistic Disorder	CHD4 RIMS1 EN2 MECP2	4.68e-04	261	41	4	C0004352
Disease	cancer (implicated_via_orthology)	NOP2 CBX8 NOTCH3 CBX2	5.17e-04	268	41	4	DOID:162 (implicated_via_orthology)
Disease	forced expiratory volume	HMGA1 HMGA2 SCMH1 PHIP ZBTB24 CBX8	7.26e-04	789	41	6	EFO_0004314
Disease	Child Development Disorders, Specific	CHD4 MECP2	7.47e-04	29	41	2	C0085997
Disease	Child Development Deviations	CHD4 MECP2	7.47e-04	29	41	2	C0085996
Disease	sexual dimorphism measurement	HMGA1 HMGA2 PHF23 SCMH1 PHIP RPS6KB2 TUT7	7.51e-04	1106	41	7	EFO_0021796
Disease	Developmental Disabilities	CHD4 MECP2	7.99e-04	30	41	2	C0008073
Disease	Mental Retardation, Psychosocial	MECP2 PHIP SETBP1	9.57e-04	139	41	3	C0025363
Disease	Profound Mental Retardation	MECP2 PHIP SETBP1	9.57e-04	139	41	3	C0020796
Disease	Mental deficiency	MECP2 PHIP SETBP1	9.57e-04	139	41	3	C0917816

Protein segments in the cluster

Peptide	Gene	Start	Entry
QPKRKKGRKTKPPRP	ELF1	171	P32519
LFPKPQRPGTKRRSK	CYLC2	36	Q14093
AKPRGAPVKRPRKTK	RPS19BP1	26	Q86WX3
QNSPPKKGKRGRPPK	PDS5B	1281	Q9NTI5
QPRSPKSKRKGQGRP	IL17B	21	Q9UHF5
KSKRKGQGRPGPLAP	IL17B	26	Q9UHF5
FGKKRKRIPPTKTRP	L3MBTL2	626	Q969R5
KSKSGSRPRKPPPRK	LRRC59	226	Q96AG4
TRPKPRKLGPQRGKA	FOXL2NB	11	Q6ZUU3
KKSRRPPGKAGLGPQ	NOTCH3	2061	Q9UM47
RKPSPKGLPNRKGVR	LCA5	66	Q86VQ0
QKGRPRKRKSPGPGA	LHX2	221	P50458
NKRQRRPATPKKPVG	MKI67	686	P46013
RRGPLGGRKKKKAPS	HDGFL2	216	Q7Z4V5
PSPPKPHRSKRGGKK	RIMS1	511	Q86UR5
KLRKSSGKGPGNPRP	CCDC71	211	Q8IV32
GNPRPKAPRKTTSKG	CCDC71	221	Q8IV32
RKKRGRKPLPPEQKA	CBX2	161	Q14781
SPGDSSKKRGPKPRK	CBX8	191	Q9HC52
AKLGPPRPKTGRRKS	MAST3	1166	O60307
KRPRGRPKGSKNKSP	HMGA2	46	P52926
PSSGPRSRKPKKKNP	EN2	226	P19622
KGPNARRKPKGSPRV	CHD4	266	Q14839
RRKPKGSPRVPDAKK	CHD4	271	Q14839
RPSRRQSKGKRPKPK	SASH3	241	O75995
TPRPRRKGKGKGRKK	COL5A3	241	P25940
TTTPGRKPRGRPKKL	HMGA1	76	P17096
LSKPTPKRGPRKRAT	JARID2	1211	Q92833
GRGSPSRREQKPPKK	MECP2	161	P51608
KKTPPKRERKPSGGS	GTF2F1	366	P35269
TPKPPLSTGGKRRRK	PHTF2	191	Q8N3S3
PPSGTKKSKRGRGRP	RPS6KB2	466	Q9UBS0
SPGGSKRKPKVPERK	NHS	1046	Q6T4R5
SRPPPAKRKKSQSRG	NOP2	791	P46087
PKKRGPKPGSKRKPR	SCMH1	306	Q96GD3
PKGPAKTKGPRHQRK	SLX4	1656	Q8IY92
KKNPKTAGPPKRPGR	BRPF1	896	P55201
KKGKPGRKARQPAGP	PRR22	391	Q8IZ63
PSKLVKRGPGRKPKV	PHIP	1631	Q8WWQ0
GTRSPKKPRSPKRKL	SRSF11	351	Q05519
PRKKSKGAPAKARPR	SOX12	111	O15370
HPPRKKDRKNRKLGP	PHF23	176	Q9BUL5
NKAKKRRLPRGFPPS	PRKDC	1146	P78527
SNKKNDPPKRKRGRP	ZBTB24	151	O43167
DPPKRKRGRPKKVNT	ZBTB24	156	O43167
GSPENKKQRSRPRKP	TUT7	171	Q5VYS8
KTPRGGKRKHKPQAP	SETBP1	1546	Q9Y6X0