Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	mRNA binding	CNBP CSTF2 SERBP1 CHTOP G3BP2 EIF4A1 DDX5	1.15e-04	694	33	7	GO:0003729
GeneOntologyMolecularFunction	unfolded protein binding	DNAJA1 DNAJA4 AFG3L2	1.17e-03	126	33	3	GO:0051082
GeneOntologyMolecularFunction	low-density lipoprotein particle receptor binding	DNAJA1 PCSK9	1.44e-03	34	33	2	GO:0050750
GeneOntologyMolecularFunction	lipoprotein particle receptor binding	DNAJA1 PCSK9	1.89e-03	39	33	2	GO:0070325
GeneOntologyMolecularFunction	molecular condensate scaffold activity	NUP153 G3BP2	2.19e-03	42	33	2	GO:0140693
GeneOntologyMolecularFunction	snRNA binding	COIL SNRPD3	3.99e-03	57	33	2	GO:0017069
GeneOntologyMolecularFunction	ribonucleoprotein complex binding	SERBP1 SNRPD3 DDX5	4.70e-03	206	33	3	GO:0043021
GeneOntologyMolecularFunction	Hsp70 protein binding	DNAJA1 DNAJA4	4.86e-03	63	33	2	GO:0030544
GeneOntologyMolecularFunction	ATP hydrolysis activity	KIF26A EIF4A1 DDX5 AFG3L2	5.79e-03	441	33	4	GO:0016887
GeneOntologyMolecularFunction	chromatin binding	SFPQ POLR3GL ZC3H4 NUP153 DDX5	6.88e-03	739	33	5	GO:0003682
GeneOntologyMolecularFunction	RNA helicase activity	EIF4A1 DDX5	7.35e-03	78	33	2	GO:0003724
GeneOntologyMolecularFunction	double-stranded RNA binding	ILF2 EIF4A1	7.35e-03	78	33	2	GO:0003725
GeneOntologyMolecularFunction	ATP-dependent activity, acting on RNA	EIF4A1 DDX5	7.72e-03	80	33	2	GO:0008186
GeneOntologyMolecularFunction	promoter-specific chromatin binding	ZC3H4 DDX5	8.29e-03	83	33	2	GO:1990841
GeneOntologyCellularComponent	nuclear body	CSTF2 EWSR1 SFPQ TCF20 COIL RBM27 SNRPD3 CHTOP DDX5	7.61e-06	903	33	9	GO:0016604
Domain	-	DNAJA1 DNAJA4	1.81e-05	4	33	2	2.10.230.10
Domain	ZF_CR	DNAJA1 DNAJA4	1.81e-05	4	33	2	PS51188
Domain	DnaJ	DNAJA1 DNAJA4	1.81e-05	4	33	2	IPR012724
Domain	DnaJ_CXXCXGXG	DNAJA1 DNAJA4	1.81e-05	4	33	2	PF00684
Domain	RRM_1	CSTF2 EWSR1 SFPQ RBM27 G3BP2	3.01e-05	208	33	5	PF00076
Domain	HSP_DnaJ_Cys-rich_dom	DNAJA1 DNAJA4	3.02e-05	5	33	2	IPR001305
Domain	RRM	CSTF2 EWSR1 SFPQ RBM27 G3BP2	3.68e-05	217	33	5	SM00360
Domain	RRM_dom	CSTF2 EWSR1 SFPQ RBM27 G3BP2	4.56e-05	227	33	5	IPR000504
Domain	RRM	CSTF2 EWSR1 SFPQ RBM27 G3BP2	4.86e-05	230	33	5	PS50102
Domain	-	CSTF2 EWSR1 SFPQ RBM27 G3BP2	6.43e-05	244	33	5	3.30.70.330
Domain	Nucleotide-bd_a/b_plait	CSTF2 EWSR1 SFPQ RBM27 G3BP2	8.37e-05	258	33	5	IPR012677
Domain	HSP40/DnaJ_pept-bd	DNAJA1 DNAJA4	1.08e-04	9	33	2	IPR008971
Domain	DnaJ_C	DNAJA1 DNAJA4	1.08e-04	9	33	2	IPR002939
Domain	DnaJ_C	DNAJA1 DNAJA4	1.08e-04	9	33	2	PF01556
Domain	zf-RanBP	EWSR1 NUP153	6.84e-04	22	33	2	PF00641
Domain	ZnF_RBZ	EWSR1 NUP153	7.48e-04	23	33	2	SM00547
Domain	ZF_RANBP2_2	EWSR1 NUP153	7.48e-04	23	33	2	PS50199
Domain	ZF_RANBP2_1	EWSR1 NUP153	8.15e-04	24	33	2	PS01358
Domain	Znf_RanBP2	EWSR1 NUP153	8.85e-04	25	33	2	IPR001876
Domain	DnaJ_domain_CS	DNAJA1 DNAJA4	1.03e-03	27	33	2	IPR018253
Domain	DEAD_ATP_HELICASE	EIF4A1 DDX5	1.36e-03	31	33	2	PS00039
Domain	RNA-helicase_DEAD-box_CS	EIF4A1 DDX5	1.54e-03	33	33	2	IPR000629
Domain	RNA_helicase_DEAD_Q_motif	EIF4A1 DDX5	1.94e-03	37	33	2	IPR014014
Domain	Q_MOTIF	EIF4A1 DDX5	1.94e-03	37	33	2	PS51195
Domain	-	RBM27 ZC3H4	2.26e-03	40	33	2	4.10.1000.10
Domain	DnaJ	DNAJA1 DNAJA4	3.25e-03	48	33	2	PF00226
Domain	zf-CCCH	RBM27 ZC3H4	3.38e-03	49	33	2	PF00642
Domain	DnaJ	DNAJA1 DNAJA4	3.38e-03	49	33	2	SM00271
Domain	DNAJ_1	DNAJA1 DNAJA4	3.38e-03	49	33	2	PS00636
Domain	DNAJ_2	DNAJA1 DNAJA4	3.38e-03	49	33	2	PS50076
Domain	-	DNAJA1 DNAJA4	3.38e-03	49	33	2	1.10.287.110
Domain	DnaJ_domain	DNAJA1 DNAJA4	3.66e-03	51	33	2	IPR001623
Domain	Znf_CCCH	RBM27 ZC3H4	4.70e-03	58	33	2	IPR000571
Domain	ZF_C3H1	RBM27 ZC3H4	4.70e-03	58	33	2	PS50103
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	CSTF2 SNRPD3 CHTOP NUP153 DDX5	1.60e-04	277	27	5	MM15414
Pathway	WP_MRNA_PROCESSING	CSTF2 EWSR1 SFPQ SNRPD3 DDX5 AFG3L2	1.73e-04	451	27	6	MM15946
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	CSTF2 SNRPD3 CHTOP NUP153 DDX5	1.77e-04	283	27	5	M13087
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION	CSTF2 SNRPD3 CHTOP	2.20e-04	62	27	3	MM15426
Pathway	REACTOME_SARS_COV_2_INFECTION	CNBP SNRPD3 NUP153 G3BP2 DDX5	2.28e-04	299	27	5	M41727
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION	CSTF2 SNRPD3 CHTOP	2.77e-04	67	27	3	M27694
Pathway	REACTOME_METABOLISM_OF_RNA	CSTF2 TSR3 SNRPD3 CHTOP NUP153 EIF4A1 DDX5	3.29e-04	724	27	7	M16843
Pathway	REACTOME_SARS_COV_2_HOST_INTERACTIONS	CNBP SNRPD3 NUP153 G3BP2	5.76e-04	204	27	4	M45011
Pathway	REACTOME_METABOLISM_OF_RNA	CSTF2 SNRPD3 CHTOP NUP153 EIF4A1 DDX5	8.85e-04	612	27	6	MM15547
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRONLESS_PRE_MRNA	CSTF2 SNRPD3	1.39e-03	29	27	2	M783
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRONLESS_PRE_MRNA	CSTF2 SNRPD3	1.39e-03	29	27	2	MM15444
Pathway	WP_MRNA_PROCESSING	CSTF2 SFPQ SNRPD3	1.74e-03	126	27	3	M39406
Pathway	REACTOME_SARS_COV_2_ACTIVATES_MODULATES_INNATE_AND_ADAPTIVE_IMMUNE_RESPONSES	CNBP NUP153 G3BP2	1.74e-03	126	27	3	M45009
Pathway	REACTOME_SARS_COV_INFECTIONS	CNBP SNRPD3 NUP153 G3BP2 DDX5	1.79e-03	471	27	5	M39009
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	CNBP LENG8 CSTF2 EWSR1 SFPQ SERBP1 ILF2 MCCC1 TCF20 COIL RBM27 SNRPD3 ZC3H4 NUP153 EIF4A1 DDX5	1.26e-16	954	34	16	36373674
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	CNBP CSTF2 EWSR1 SFPQ SERBP1 ILF2 RBM27 SNRPD3 ZC3H4 CHTOP NOM1 G3BP2 EIF4A1 PURG DDX5	3.30e-16	807	34	15	22681889
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	CNBP LENG8 EWSR1 SFPQ ILF2 MCCC1 TCF20 COIL DNAJA1 RBM27 SNRPD3 ZC3H4 NUP153 EIF4A1 DDX5	6.49e-15	989	34	15	36424410
Pubmed	The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.	CNBP CSTF2 EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 RBM27 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1 DDX5	6.04e-14	1153	34	15	29845934
Pubmed	Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.	EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 RBM27 SNRPD3 CHTOP NOM1 NUP153 G3BP2 EIF4A1 DDX5 AFG3L2	2.10e-13	1257	34	15	36526897
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	CSTF2 EWSR1 SFPQ ILF2 TCF20 COIL DNAJA1 SNRPD3 ZC3H4 CHTOP NUP153 EIF4A1 DDX5 AFG3L2	2.71e-13	1024	34	14	24711643
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	CSTF2 EWSR1 SFPQ ILF2 MCCC1 TCF20 COIL DNAJA1 RBM27 SNRPD3 CHTOP NOM1 NUP153 DDX5 AFG3L2	3.19e-13	1294	34	15	30804502
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	EWSR1 SFPQ SERBP1 ILF2 COIL RBM27 ZC3H4 CHTOP NOM1 NUP153 G3BP2 EIF4A1 DDX5	5.60e-13	847	34	13	35850772
Pubmed	SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.	CNBP EWSR1 SFPQ SERBP1 DNAJA1 SNRPD3 ZC3H4 CHTOP NOM1 NUP153 G3BP2 DDX5	6.77e-13	655	34	12	35819319
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	CNBP CSTF2 EWSR1 SFPQ SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 ZC3H4 NUP153 G3BP2 EIF4A1 DDX5	1.28e-12	1149	34	14	35446349
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	EWSR1 SFPQ TCF20 COIL RBM27 ZC3H4 NUP153 EIF4A1 DDX5	6.04e-12	283	34	9	30585729
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	CSTF2 EWSR1 SFPQ ILF2 TCF20 COIL TSR3 DNAJA1 RBM27 SNRPD3 ZC3H4 EIF4A1 DDX5	1.21e-11	1082	34	13	38697112
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	LENG8 EWSR1 SFPQ ILF2 TCF20 RBM27 DOCK8 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1 DDX5	1.53e-11	1103	34	13	34189442
Pubmed	Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.	LENG8 EWSR1 SERBP1 ILF2 DNAJA1 ZC3H4 NOM1 G3BP2 DDX5 AFG3L2	2.52e-11	486	34	10	30940648
Pubmed	Systematic analysis of human protein complexes identifies chromosome segregation proteins.	CNBP XDH SFPQ SERBP1 COIL DNAJA1 DNAJA4 SNRPD3 ZC3H4 CHTOP NUP153 EIF4A1 DDX5	2.71e-11	1155	34	13	20360068
Pubmed	Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.	LENG8 CSTF2 SFPQ SERBP1 DNAJA1 DNAJA4 ZC3H4 CHTOP NUP153 EIF4A1	3.73e-11	506	34	10	30890647
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	LENG8 SFPQ SERBP1 MCCC1 COIL RBM27 SNRPD3 ZC3H4 CHTOP NUP153 DDX5 AFG3L2	4.18e-11	934	34	12	33916271
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	CSTF2 SFPQ SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 ZC3H4 CHTOP G3BP2 DDX5	4.64e-11	713	34	11	29802200
Pubmed	Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.	LENG8 EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 G3BP2 EIF4A1 DDX5 AFG3L2	5.54e-11	725	34	11	27025967
Pubmed	Identifying and quantifying in vivo methylation sites by heavy methyl SILAC.	EWSR1 SFPQ SNRPD3 G3BP2 DDX5	9.19e-11	30	34	5	15782174
Pubmed	Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.	EWSR1 SFPQ SERBP1 ILF2 NUP153 G3BP2 EIF4A1 DDX5	1.34e-10	260	34	8	36199071
Pubmed	Proteomic analysis of the cullin 4B interactome using proximity-dependent biotinylation in living cells.	CSTF2 EWSR1 SFPQ DOCK8 SNRPD3 NUP153 DDX5	1.35e-10	153	34	7	28225217
Pubmed	Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.	CNBP EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP NUP153 G3BP2 DDX5	1.77e-10	809	34	11	32129710
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	EWSR1 SFPQ SERBP1 ILF2 COIL SNRPD3 CHTOP NOM1 EIF4A1 DDX5	2.12e-10	605	34	10	28977666
Pubmed	TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.	EWSR1 SFPQ ILF2 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	2.48e-10	430	34	9	38172120
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	2.49e-10	615	34	10	31048545
Pubmed	Comparative Proteomics and Interactome Analysis of the SARS-CoV-2 Nucleocapsid Protein in Human and Bat Cell Lines.	CNBP SFPQ SERBP1 SNRPD3 CHTOP G3BP2 DDX5	2.61e-10	168	34	7	39066279
Pubmed	Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.	CNBP SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	2.95e-10	626	34	10	33644029
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	CNBP EWSR1 SFPQ SERBP1 ILF2 DNAJA1 DNAJA4 SNRPD3 ZC3H4 G3BP2 EIF4A1 DDX5 AFG3L2	3.31e-10	1415	34	13	28515276
Pubmed	An inducible CRISPR/Cas9 screen identifies DTX2 as a transcriptional regulator of human telomerase.	EWSR1 SFPQ MCCC1 TCF20 RBM27 NUP153 DDX5	4.23e-10	180	34	7	35198878
Pubmed	SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response.	SERBP1 ILF2 COIL DNAJA1 SNRPD3 G3BP2 EIF4A1 DDX5 AFG3L2	4.75e-10	463	34	9	34901782
Pubmed	Mutual regulation between OGT and XIAP to control colon cancer cell growth and invasion.	EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 NOM1 G3BP2 EIF4A1 DDX5	9.17e-10	704	34	10	32994395
Pubmed	TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.	EWSR1 SFPQ SERBP1 ILF2 TSR3 DNAJA1 SNRPD3 NOM1 G3BP2 EIF4A1 DDX5	9.50e-10	949	34	11	36574265
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	EWSR1 SFPQ ILF2 TCF20 DNAJA1 DNAJA4 ZC3H4 SRGAP3 NUP153 G3BP2 EIF4A1	1.11e-09	963	34	11	28671696
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	SFPQ SERBP1 ILF2 DNAJA1 DNAJA4 SNRPD3 ZC3H4 NUP153 G3BP2 EIF4A1 DDX5	1.21e-09	971	34	11	33306668
Pubmed	The intracellular interactome of tetraspanin-enriched microdomains reveals their function as sorting machineries toward exosomes.	EWSR1 SFPQ SERBP1 ILF2 SNRPD3 EIF4A1 DDX5	1.32e-09	212	34	7	23463506
Pubmed	SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.	CNBP SFPQ SERBP1 DNAJA1 CHTOP G3BP2 DDX5 AFG3L2	1.50e-09	353	34	8	27545878
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	SERBP1 ILF2 COIL DNAJA1 RBM27 CHTOP NOM1 G3BP2 EIF4A1 DDX5	1.89e-09	759	34	10	35915203
Pubmed	Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.	EWSR1 SFPQ SERBP1 ILF2 ZC3H4 CHTOP G3BP2 EIF4A1 DDX5	2.17e-09	551	34	9	34728620
Pubmed	Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP NOM1 G3BP2 EIF4A1 DDX5 AFG3L2	2.44e-09	1335	34	12	29229926
Pubmed	SPOP attenuates migration and invasion of choriocarcinoma cells by promoting DHX9 degradation.	EWSR1 SFPQ ILF2 NUP153 G3BP2 DDX5	3.00e-09	130	34	6	32905556
Pubmed	Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network.	SFPQ ILF2 SNRPD3 ZC3H4 EIF4A1 DDX5	3.93e-09	136	34	6	26979993
Pubmed	SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.	CNBP CSTF2 EWSR1 SFPQ SERBP1 G3BP2 DDX5	5.17e-09	258	34	7	37794589
Pubmed	RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity.	SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 G3BP2 EIF4A1 DDX5	6.40e-09	425	34	8	21081503
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	EWSR1 SFPQ TCF20 RBM27 G3BP2 EIF4A1 DDX5	7.83e-09	274	34	7	34244482
Pubmed	Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.	EWSR1 SFPQ ILF2 TSR3 RBM27 ZC3H4 CHTOP G3BP2 DDX5	9.47e-09	653	34	9	33742100
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	EWSR1 SFPQ SERBP1 ILF2 TCF20 COIL DNAJA1 NUP153 EIF4A1	9.47e-09	653	34	9	22586326
Pubmed	The SARS-CoV-2 RNA interactome.	CNBP EWSR1 SERBP1 ILF2 G3BP2	1.01e-08	74	34	5	33989516
Pubmed	A Noncanonical Role of Fructose-1, 6-Bisphosphatase 1 Is Essential for Inhibition of Notch1 in Breast Cancer.	CNBP EWSR1 SFPQ SERBP1 ILF2 SNRPD3 DDX5	1.05e-08	286	34	7	32041737
Pubmed	PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.	EWSR1 SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 NOM1 G3BP2 EIF4A1	1.31e-08	678	34	9	30209976
Pubmed	Proteomic analysis of SRm160-containing complexes reveals a conserved association with cohesin.	CSTF2 SFPQ DNAJA1 SNRPD3 EIF4A1 DDX5	1.50e-08	170	34	6	16159877
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	CNBP EWSR1 SFPQ SERBP1 ILF2 DNAJA1 CHTOP G3BP2 EIF4A1 DDX5 AFG3L2	1.61e-08	1247	34	11	27684187
Pubmed	ATG5 is required for B cell polarization and presentation of particulate antigens.	CSTF2 EWSR1 SERBP1 ILF2 COIL DNAJA1 RBM27 CHTOP G3BP2	1.74e-08	701	34	9	30196744
Pubmed	C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 NOM1 G3BP2 EIF4A1 DDX5 AFG3L2	1.75e-08	1257	34	11	37317656
Pubmed	BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.	CNBP EWSR1 SFPQ SERBP1 ILF2 SNRPD3 CHTOP G3BP2 DDX5	1.97e-08	711	34	9	33022573
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	SFPQ ILF2 COIL DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	2.04e-08	714	34	9	28302793
Pubmed	CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.	EWSR1 SFPQ ILF2 DNAJA1 DNAJA4 SNRPD3 NUP153 DDX5	2.06e-08	494	34	8	26831064
Pubmed	14-3-3sigma controls mitotic translation to facilitate cytokinesis.	SFPQ SERBP1 CHTOP G3BP2 DDX5	2.16e-08	86	34	5	17361185
Pubmed	Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.	LENG8 EWSR1 SFPQ ILF2 RBM27 SNRPD3 ZC3H4 CHTOP DDX5	2.50e-08	731	34	9	29298432
Pubmed	Immunosuppressive lncRNA LINC00624 promotes tumor progression and therapy resistance through ADAR1 stabilization.	SFPQ SERBP1 MCCC1 DDX5	2.68e-08	32	34	4	36252997
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	EWSR1 SFPQ ILF2 MCCC1 COIL RBM27 SNRPD3 NUP153 EIF4A1 DDX5 AFG3L2	2.85e-08	1318	34	11	30463901
Pubmed	Lysosomal Signaling Licenses Embryonic Stem Cell Differentiation via Inactivation of Tfe3.	EWSR1 SFPQ SERBP1 TCF20 CHTOP EIF4A1 DDX5	2.92e-08	332	34	7	30595499
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	CSTF2 SFPQ SERBP1 ILF2 TCF20 DNAJA1 RBM27 CHTOP NUP153 EIF4A1	2.95e-08	1014	34	10	32416067
Pubmed	hnRNPA1 couples nuclear export and translation of specific mRNAs downstream of FGF-2/S6K2 signalling.	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 G3BP2 DDX5	3.88e-08	346	34	7	25324306
Pubmed	AIMP2-DX2 provides therapeutic interface to control KRAS-driven tumorigenesis.	SERBP1 ILF2 DNAJA1 NUP153 EIF4A1 DDX5	3.95e-08	200	34	6	35546148
Pubmed	A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.	CNBP EWSR1 SFPQ RBM27 G3BP2 EIF4A1 AFG3L2	3.95e-08	347	34	7	16033648
Pubmed	WWP2-WWP1 ubiquitin ligase complex coordinated by PPM1G maintains the balance between cellular p73 and ΔNp73 levels.	SERBP1 DNAJA1 G3BP2 EIF4A1 DDX5	3.97e-08	97	34	5	25071155
Pubmed	The scaffold protein KSR1, a novel therapeutic target for the treatment of Merlin-deficient tumors.	EWSR1 SERBP1 DNAJA1 G3BP2 EIF4A1 DDX5 AFG3L2	4.19e-08	350	34	7	26549023
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	CNBP LENG8 EWSR1 SERBP1 ILF2 COIL RBM27 SNRPD3 CHTOP NOM1 G3BP2	4.26e-08	1371	34	11	36244648
Pubmed	Interactomic analysis of REST/NRSF and implications of its functional links with the transcription suppressor TRIM28 during neuronal differentiation.	EWSR1 SFPQ SERBP1 ILF2 SNRPD3 G3BP2	4.57e-08	205	34	6	27976729
Pubmed	Compartmentalization of the SUMO/RNF4 pathway by SLX4 drives DNA repair.	CSTF2 SFPQ SERBP1 MCCC1 NUP153 EIF4A1 DDX5	4.80e-08	357	34	7	37059091
Pubmed	SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling.	SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 G3BP2 DDX5 AFG3L2	5.25e-08	558	34	8	27591049
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	SFPQ SERBP1 ILF2 COIL DNAJA1 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1 DDX5	6.30e-08	1425	34	11	30948266
Pubmed	Quantitative Lys-ϵ-Gly-Gly (diGly) proteomics coupled with inducible RNAi reveals ubiquitin-mediated proteolysis of DNA damage-inducible transcript 4 (DDIT4) by the E3 ligase HUWE1.	SFPQ SERBP1 ILF2 MCCC1 DNAJA1 SNRPD3 EIF4A1	6.96e-08	377	34	7	25147182
Pubmed	LukS-PV inhibits hepatocellular carcinoma cells migration by downregulating HDAC6 expression.	EWSR1 SFPQ SERBP1 ILF2 SNRPD3 G3BP2 EIF4A1 DDX5	7.07e-08	580	34	8	35676659
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	SFPQ DNAJA1 DOCK8 SNRPD3 NUP153 G3BP2 EIF4A1 DDX5	7.26e-08	582	34	8	20467437
Pubmed	Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage.	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 NOM1 EIF4A1 DDX5	8.52e-08	844	34	9	25963833
Pubmed	Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.	APBA1 SFPQ SERBP1 MCCC1 COIL DNAJA1 SRGAP3 CHTOP G3BP2 AFG3L2	8.74e-08	1139	34	10	36417873
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	8.78e-08	847	34	9	35235311
Pubmed	FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.	SFPQ ILF2 DNAJA1 SNRPD3 CHTOP NOM1 EIF4A1 AFG3L2	9.28e-08	601	34	8	33658012
Pubmed	The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation.	SFPQ SERBP1 ILF2 COIL SNRPD3 EIF4A1 DDX5 AFG3L2	9.64e-08	604	34	8	37616343
Pubmed	Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.	CSTF2 EWSR1 SFPQ SERBP1 DNAJA1 SNRPD3 ZC3H4	1.02e-07	399	34	7	35987950
Pubmed	Ovarian tumorB1-mediated heat shock transcription factor 1 deubiquitination is critical for glycolysis and development of endometriosis.	EWSR1 SFPQ SERBP1 ILF2 CHTOP EIF4A1	1.05e-07	236	34	6	36339263
Pubmed	The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.	SFPQ SERBP1 ILF2 CHTOP EIF4A1 DDX5	1.13e-07	239	34	6	26641092
Pubmed	ZF21 is a new regulator of focal adhesion disassembly and a potential member of the spreading initiation center.	EWSR1 SFPQ SERBP1 DDX5	1.21e-07	46	34	4	20890123
Pubmed	Transcription factor protein interactomes reveal genetic determinants in heart disease.	EWSR1 SFPQ ILF2 DNAJA1 CHTOP EIF4A1 DDX5	1.25e-07	411	34	7	35182466
Pubmed	Heterozygous deletion of chromosome 17p renders prostate cancer vulnerable to inhibition of RNA polymerase II.	ILF2 MCCC1 DNAJA1 CHTOP EIF4A1 DDX5	1.28e-07	244	34	6	30349055
Pubmed	Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.	EWSR1 ILF2 NUP153 G3BP2 EIF4A1 DDX5	1.31e-07	245	34	6	21182205
Pubmed	Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.	CNBP EWSR1 SFPQ SERBP1 ILF2 G3BP2 DDX5	1.47e-07	421	34	7	34650049
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	CSTF2 SFPQ SERBP1 ILF2 SNRPD3 CHTOP EIF4A1 DDX5	1.73e-07	652	34	8	31180492
Pubmed	Landscape of the SOX2 protein-protein interactome.	EWSR1 ILF2 G3BP2 EIF4A1 DDX5	2.16e-07	136	34	5	21280222
Pubmed	Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.	LENG8 EWSR1 SFPQ TCF20 RBM27 NUP153 DDX5	2.56e-07	457	34	7	32344865
Pubmed	KAP1 Recruitment of the 7SK snRNP Complex to Promoters Enables Transcription Elongation by RNA Polymerase II.	SERBP1 MCCC1 COIL SNRPD3 NUP153 DDX5	2.93e-07	281	34	6	26725010
Pubmed	The PRMT5/WDR77 complex regulates alternative splicing through ZNF326 in breast cancer.	SERBP1 ILF2 SNRPD3 G3BP2 DDX5	3.18e-07	147	34	5	28977470
Pubmed	MBD5 and MBD6 stabilize the BAP1 complex and promote BAP1-dependent cancer.	SERBP1 ILF2 DNAJA1 SNRPD3 EIF4A1 DDX5	3.32e-07	287	34	6	36180891
Pubmed	LINKIN, a new transmembrane protein necessary for cell adhesion.	CSTF2 EWSR1 SERBP1 ILF2 DNAJA1 SNRPD3 DDX5	3.56e-07	480	34	7	25437307
Pubmed	Systematic Determination of Human Cyclin Dependent Kinase (CDK)-9 Interactome Identifies Novel Functions in RNA Splicing Mediated by the DEAD Box (DDX)-5/17 RNA Helicases.	EWSR1 SFPQ SERBP1 RBM27 G3BP2 DDX5	3.90e-07	295	34	6	26209609
Pubmed	Inhibition of calpain 1 restores plasma membrane stability to pharmacologically rescued Phe508del-CFTR variant.	EWSR1 SFPQ MCCC1 DNAJA1 SNRPD3 EIF4A1 DDX5	3.98e-07	488	34	7	31324722
Pubmed	Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment.	CNBP EWSR1 SFPQ ILF2 SNRPD3 EIF4A1 DDX5	4.14e-07	491	34	7	22623428
Pubmed	UBE2O promotes lipid metabolic reprogramming and liver cancer progression by mediating HADHA ubiquitination.	CNBP SFPQ SERBP1 ILF2 DNAJA1 CHTOP EIF4A1	4.14e-07	491	34	7	36273042
Interaction	SMC5 interactions	CNBP LENG8 CSTF2 EWSR1 SFPQ SERBP1 ILF2 MCCC1 TCF20 COIL RBM27 SNRPD3 ZC3H4 NUP153 EIF4A1 DDX5	1.14e-12	1000	34	16	int:SMC5
Interaction	OBSL1 interactions	CSTF2 EWSR1 SFPQ ILF2 TCF20 COIL DNAJA1 POLR3GL SNRPD3 ZC3H4 CHTOP NUP153 G3BP2 EIF4A1 DDX5	4.32e-12	902	34	15	int:OBSL1
Interaction	RNF113A interactions	CNBP EWSR1 SFPQ SERBP1 COIL DNAJA1 SNRPD3 ZC3H4 CHTOP NOM1 NUP153 G3BP2 DDX5	3.94e-11	692	34	13	int:RNF113A
Interaction	RBM45 interactions	EWSR1 SFPQ ILF2 SNRPD3 ZC3H4 EIF4A1 DDX5 AFG3L2	1.56e-09	207	34	8	int:RBM45
Interaction	MYCN interactions	CNBP LENG8 EWSR1 SFPQ SERBP1 ILF2 TCF20 COIL DNAJA1 SNRPD3 ZC3H4 CHTOP NOM1 G3BP2 DDX5	1.58e-09	1373	34	15	int:MYCN
Interaction	CHD4 interactions	EWSR1 SFPQ SERBP1 ILF2 TCF20 COIL DNAJA1 SNRPD3 CHTOP NOM1 EIF4A1 DDX5 AFG3L2	1.65e-09	938	34	13	int:CHD4
Interaction	SNRNP70 interactions	CSTF2 EWSR1 SFPQ SERBP1 ILF2 DNAJA1 RBM27 DOCK8 SNRPD3 ZC3H4 CHTOP G3BP2 DDX5	2.95e-09	984	34	13	int:SNRNP70
Interaction	DDRGK1 interactions	EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 RBM27 SNRPD3 SRGAP3 CHTOP NOM1 G3BP2 DDX5 AFG3L2	4.95e-09	1249	34	14	int:DDRGK1
Interaction	MEN1 interactions	LENG8 EWSR1 SFPQ ILF2 TCF20 SNRPD3 ZC3H4 CHTOP NOM1 NUP153 G3BP2 EIF4A1 DDX5	5.06e-09	1029	34	13	int:MEN1
Interaction	MECP2 interactions	LENG8 CSTF2 EWSR1 SFPQ ILF2 TCF20 COIL TSR3 DNAJA1 RBM27 SNRPD3 ZC3H4 EIF4A1 DDX5	7.26e-09	1287	34	14	int:MECP2
Interaction	RC3H1 interactions	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 ZC3H4 G3BP2 EIF4A1 AFG3L2	8.02e-09	677	34	11	int:RC3H1
Interaction	BAP1 interactions	CNBP CSTF2 EWSR1 SFPQ SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 ZC3H4 NUP153 G3BP2 EIF4A1 DDX5	9.48e-09	1314	34	14	int:BAP1
Interaction	CPSF6 interactions	CNBP LENG8 CSTF2 EWSR1 SFPQ ILF2 SNRPD3 ZC3H4 CHTOP DDX5	1.01e-08	526	34	10	int:CPSF6
Interaction	LARP7 interactions	CNBP EWSR1 SFPQ SERBP1 ILF2 MCCC1 COIL DNAJA1 SNRPD3 CHTOP NUP153 PURG DDX5	1.30e-08	1113	34	13	int:LARP7
Interaction	HEXIM1 interactions	CNBP CSTF2 EWSR1 SFPQ SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 CHTOP EIF4A1 DDX5	1.52e-08	913	34	12	int:HEXIM1
Interaction	CUL4B interactions	CSTF2 EWSR1 SFPQ SERBP1 ILF2 MCCC1 DNAJA1 DOCK8 SNRPD3 NUP153 DDX5	1.70e-08	728	34	11	int:CUL4B
Interaction	RIOK1 interactions	SFPQ SERBP1 ILF2 COIL DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	1.88e-08	562	34	10	int:RIOK1
Interaction	CELF1 interactions	EWSR1 SFPQ ILF2 RBM27 ZC3H4 G3BP2 PURG DDX5	2.08e-08	288	34	8	int:CELF1
Interaction	CEBPB interactions	EWSR1 SFPQ SERBP1 ILF2 TCF20 DNAJA1 DNAJA4 SNRPD3 ZC3H4 CHTOP NUP153 G3BP2 EIF4A1 DDX5	3.12e-08	1443	34	14	int:CEBPB
Interaction	NAA40 interactions	LENG8 SFPQ SERBP1 MCCC1 COIL RBM27 SNRPD3 ZC3H4 CHTOP NUP153 DDX5 AFG3L2	3.25e-08	978	34	12	int:NAA40
Interaction	DOT1L interactions	SFPQ SERBP1 COIL RBM27 ZC3H4 CHTOP NOM1 NUP153 G3BP2 EIF4A1 DDX5	4.88e-08	807	34	11	int:DOT1L
Interaction	CEBPA interactions	LENG8 EWSR1 SFPQ ILF2 TCF20 RBM27 DOCK8 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1 DDX5	4.91e-08	1245	34	13	int:CEBPA
Interaction	DTX2 interactions	SLC22A18AS EWSR1 SFPQ MCCC1 TCF20 RBM27 NUP153 DDX5	5.95e-08	330	34	8	int:DTX2
Interaction	PRMT5 interactions	LENG8 EWSR1 SFPQ SERBP1 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1	6.02e-08	471	34	9	int:PRMT5
Interaction	BRD7 interactions	LENG8 EWSR1 SERBP1 ILF2 DNAJA1 ZC3H4 NOM1 G3BP2 DDX5 AFG3L2	6.13e-08	637	34	10	int:BRD7
Interaction	SUZ12 interactions	CNBP EWSR1 ILF2 DNAJA1 SNRPD3 CHTOP NOM1 G3BP2 DDX5 AFG3L2	6.79e-08	644	34	10	int:SUZ12
Interaction	SNRPA interactions	LENG8 CSTF2 EWSR1 SFPQ ILF2 SNRPD3 ZC3H4 CHTOP DDX5	7.33e-08	482	34	9	int:SNRPA
Interaction	SRRM1 interactions	CSTF2 EWSR1 SFPQ ILF2 DNAJA1 SNRPD3 PURG DDX5	8.95e-08	348	34	8	int:SRRM1
Interaction	RC3H2 interactions	EWSR1 SERBP1 ILF2 DNAJA1 RBM27 SNRPD3 NOM1 G3BP2 EIF4A1 AFG3L2	9.42e-08	667	34	10	int:RC3H2
Interaction	RNF2 interactions	CNBP EWSR1 MCCC1 COIL SNRPD3 ZC3H4 CHTOP NOM1 G3BP2 DDX5 AFG3L2	9.99e-08	866	34	11	int:RNF2
Interaction	RPS6 interactions	CNBP LENG8 SERBP1 ILF2 MCCC1 COIL SNRPD3 NOM1 G3BP2 EIF4A1 PURG	1.10e-07	874	34	11	int:RPS6
Interaction	ZC3H18 interactions	LENG8 EWSR1 SFPQ ILF2 COIL RBM27 SNRPD3 ZC3H4 CHTOP PURG DDX5	1.14e-07	877	34	11	int:ZC3H18
Interaction	ACTC1 interactions	LENG8 CSTF2 SFPQ SERBP1 DNAJA1 DNAJA4 ZC3H4 CHTOP NUP153 EIF4A1	1.36e-07	694	34	10	int:ACTC1
Interaction	PHB1 interactions	LENG8 EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 SNRPD3 G3BP2 EIF4A1 DDX5 AFG3L2	1.48e-07	1123	34	12	int:PHB1
Interaction	SNRPF interactions	EWSR1 SERBP1 ILF2 COIL DOCK8 SNRPD3 CHTOP DDX5	1.94e-07	385	34	8	int:SNRPF
Interaction	SYNCRIP interactions	CNBP EWSR1 SFPQ SERBP1 ILF2 DNAJA4 SNRPD3 G3BP2 PURG DDX5	1.94e-07	721	34	10	int:SYNCRIP
Interaction	XRCC6 interactions	EWSR1 SFPQ SERBP1 ILF2 TCF20 COIL RBM27 ZC3H4 NUP153 EIF4A1 DDX5	2.01e-07	928	34	11	int:XRCC6
Interaction	PRMT1 interactions	EWSR1 SFPQ SERBP1 ILF2 COIL SNRPD3 ZC3H4 CHTOP G3BP2 EIF4A1 DDX5	2.03e-07	929	34	11	int:PRMT1
Interaction	RECQL4 interactions	APBA1 EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP NOM1 G3BP2 EIF4A1 DDX5 AFG3L2	2.14e-07	1412	34	13	int:RECQL4
Interaction	METTL14 interactions	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 G3BP2 EIF4A1 DDX5	2.54e-07	558	34	9	int:METTL14
Interaction	EFTUD2 interactions	CNBP EWSR1 SFPQ SERBP1 ILF2 DNAJA1 DNAJA4 SNRPD3 ZC3H4 G3BP2 EIF4A1 DDX5 AFG3L2	2.89e-07	1449	34	13	int:EFTUD2
Interaction	FUS interactions	CSTF2 EWSR1 SFPQ SERBP1 ILF2 SNRPD3 ZC3H4 NUP153 EIF4A1 DDX5	3.05e-07	757	34	10	int:FUS
Interaction	GATA4 interactions	EWSR1 SFPQ ILF2 MCCC1 DNAJA1 CHTOP EIF4A1 DDX5	3.19e-07	411	34	8	int:GATA4
Interaction	SNRPD2 interactions	CNBP EWSR1 SFPQ ILF2 COIL DNAJA1 SNRPD3 DDX5	3.37e-07	414	34	8	int:SNRPD2
Interaction	TNIP1 interactions	LENG8 EWSR1 SFPQ SERBP1 ILF2 TSR3 DNAJA1 SNRPD3 NOM1 G3BP2 EIF4A1 DDX5	3.53e-07	1217	34	12	int:TNIP1
Interaction	HECTD1 interactions	SFPQ SERBP1 ILF2 COIL DNAJA1 RBM27 CHTOP NOM1 G3BP2 EIF4A1 DDX5	3.61e-07	984	34	11	int:HECTD1
Interaction	NUP35 interactions	LENG8 EWSR1 SFPQ SERBP1 TCF20 RBM27 NUP153 DDX5	4.04e-07	424	34	8	int:NUP35
Interaction	BTF3 interactions	CNBP SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	5.01e-07	799	34	10	int:BTF3
Interaction	LINC00624 interactions	SFPQ SERBP1 MCCC1 DDX5	5.32e-07	39	34	4	int:LINC00624
Interaction	SNRPC interactions	CSTF2 EWSR1 SERBP1 ILF2 COIL SNRPD3 CHTOP DDX5	5.35e-07	440	34	8	int:SNRPC
Interaction	SMN1 interactions	LENG8 EWSR1 SFPQ COIL SNRPD3 CHTOP DDX5	5.63e-07	299	34	7	int:SMN1
Interaction	UFL1 interactions	XDH EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 G3BP2 EIF4A1 DDX5 AFG3L2	5.75e-07	1031	34	11	int:UFL1
Interaction	WWP2 interactions	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	7.91e-07	840	34	10	int:WWP2
Interaction	C9orf72 interactions	EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 SNRPD3 NOM1 G3BP2 EIF4A1 DDX5 AFG3L2	8.35e-07	1319	34	12	int:C9orf72
Interaction	GLDC interactions	EWSR1 SFPQ TCF20 RBM27 G3BP2 EIF4A1 DDX5	9.06e-07	321	34	7	int:GLDC
Interaction	RBM8A interactions	EWSR1 SERBP1 ILF2 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	9.22e-07	473	34	8	int:RBM8A
Interaction	U2AF2 interactions	EWSR1 SFPQ SERBP1 ILF2 DNAJA1 SNRPD3 CHTOP EIF4A1 DDX5	9.22e-07	651	34	9	int:U2AF2
Interaction	MEPCE interactions	CNBP EWSR1 SFPQ SERBP1 ILF2 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	9.70e-07	859	34	10	int:MEPCE
Interaction	ACE2 interactions	CNBP EWSR1 SFPQ SERBP1 ILF2 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1 DDX5	1.15e-06	1106	34	11	int:ACE2
Interaction	RPL7A interactions	CNBP EWSR1 SERBP1 ILF2 MCCC1 ANTXR2 COIL NOM1 G3BP2	1.31e-06	679	34	9	int:RPL7A
Interaction	EIF4A3 interactions	SERBP1 ILF2 TCF20 SNRPD3 CHTOP NOM1 EIF4A1 DDX5	1.38e-06	499	34	8	int:EIF4A3
Interaction	TFE3 interactions	EWSR1 SFPQ SERBP1 TCF20 CHTOP EIF4A1 DDX5	1.44e-06	344	34	7	int:TFE3
Interaction	FBP1 interactions	CNBP EWSR1 SFPQ SERBP1 ILF2 SNRPD3 DDX5	1.55e-06	348	34	7	int:FBP1
Interaction	ERG interactions	SFPQ ILF2 TCF20 DNAJA1 DNAJA4 DDX5	1.78e-06	223	34	6	int:ERG
Interaction	SNRPB interactions	CSTF2 EWSR1 ILF2 COIL SNRPD3 ZC3H4 CHTOP DDX5	1.79e-06	517	34	8	int:SNRPB
Interaction	WDR77 interactions	SERBP1 ILF2 SNRPD3 CHTOP G3BP2 EIF4A1 DDX5	1.98e-06	361	34	7	int:WDR77
Interaction	FZR1 interactions	SFPQ SERBP1 ILF2 DNAJA1 DNAJA4 SNRPD3 ZC3H4 NUP153 G3BP2 EIF4A1 DDX5	2.03e-06	1172	34	11	int:FZR1
Interaction	DDX21 interactions	CNBP SFPQ SERBP1 ILF2 CHTOP NUP153 G3BP2 PURG DDX5	2.07e-06	718	34	9	int:DDX21
Interaction	RPS16 interactions	CNBP SFPQ SERBP1 ILF2 SNRPD3 G3BP2 EIF4A1 PURG DDX5	2.22e-06	724	34	9	int:RPS16
Interaction	CIT interactions	SFPQ SERBP1 ILF2 TCF20 COIL DNAJA1 RBM27 SNRPD3 NUP153 G3BP2 EIF4A1 DDX5	2.27e-06	1450	34	12	int:CIT
Interaction	HNRNPA1 interactions	LENG8 EWSR1 SFPQ ILF2 RBM27 SNRPD3 ZC3H4 CHTOP G3BP2 DDX5	2.30e-06	945	34	10	int:HNRNPA1
Interaction	FMR1 interactions	EWSR1 SFPQ SERBP1 ILF2 TCF20 CHTOP G3BP2 DDX5	2.34e-06	536	34	8	int:FMR1
Interaction	KHDRBS2 interactions	EWSR1 SERBP1 ILF2 CHTOP DDX5	2.38e-06	129	34	5	int:KHDRBS2
Interaction	PIH1D1 interactions	EWSR1 SFPQ SERBP1 ILF2 PLD2 DNAJA1 SNRPD3 EIF4A1 DDX5	2.40e-06	731	34	9	int:PIH1D1
Interaction	OGT interactions	EWSR1 SFPQ SERBP1 ILF2 COIL DNAJA1 NOM1 G3BP2 EIF4A1 DDX5	2.41e-06	950	34	10	int:OGT
Interaction	SIRT7 interactions	EWSR1 SFPQ SERBP1 ILF2 TCF20 COIL DNAJA1 NUP153 EIF4A1	2.78e-06	744	34	9	int:SIRT7
Interaction	CHD3 interactions	CSTF2 EWSR1 SFPQ SERBP1 ILF2 COIL CHTOP EIF4A1 DDX5	3.20e-06	757	34	9	int:CHD3
Interaction	GRWD1 interactions	EWSR1 SERBP1 ILF2 COIL DNAJA1 NOM1 AFG3L2	3.30e-06	390	34	7	int:GRWD1
Interaction	AR interactions	CNBP LENG8 SFPQ ILF2 TCF20 DNAJA1 RBM27 ZC3H4 EIF4A1 DDX5	3.55e-06	992	34	10	int:AR
Interaction	SLX4 interactions	CSTF2 SFPQ SERBP1 MCCC1 TCF20 NUP153 EIF4A1 DDX5	3.79e-06	572	34	8	int:SLX4
Interaction	BTRC interactions	EWSR1 SFPQ SERBP1 ILF2 NUP153 G3BP2 EIF4A1 DDX5 AFG3L2	3.88e-06	775	34	9	int:BTRC
Interaction	EIF4B interactions	CSTF2 SERBP1 SNRPD3 NUP153 G3BP2 EIF4A1 DDX5	4.03e-06	402	34	7	int:EIF4B
Interaction	KIF23 interactions	CNBP XDH SFPQ SERBP1 ILF2 COIL SNRPD3 G3BP2 EIF4A1 DDX5	5.00e-06	1031	34	10	int:KIF23
Interaction	YTHDC1 interactions	ILF2 TCF20 COIL SNRPD3 NOM1 PURG AFG3L2	5.13e-06	417	34	7	int:YTHDC1
Interaction	REST interactions	EWSR1 SFPQ SERBP1 ILF2 SNRPD3 G3BP2	5.84e-06	274	34	6	int:REST
Interaction	RNF43 interactions	LENG8 SFPQ TCF20 COIL DNAJA1 NUP153 DDX5	5.99e-06	427	34	7	int:RNF43
Interaction	HSF1 interactions	EWSR1 SFPQ SERBP1 ILF2 CHTOP G3BP2 EIF4A1 DDX5	6.02e-06	609	34	8	int:HSF1
Interaction	BIRC3 interactions	SFPQ SERBP1 ILF2 COIL DNAJA1 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1 DDX5	7.10e-06	1334	34	11	int:BIRC3
Interaction	CBLL1 interactions	SFPQ ILF2 EIF4A1 DDX5	7.14e-06	74	34	4	int:CBLL1
Interaction	MIDN interactions	SFPQ SERBP1 ILF2 COIL SNRPD3 EIF4A1 DDX5 AFG3L2	7.36e-06	626	34	8	int:MIDN
Interaction	PABPC4 interactions	CNBP SERBP1 ILF2 G3BP2 EIF4A1 PURG DDX5	7.50e-06	442	34	7	int:PABPC4
Interaction	TGS1 interactions	COIL SNRPD3 SRGAP3 AFG3L2	7.54e-06	75	34	4	int:TGS1
Interaction	GTPBP4 interactions	CNBP SERBP1 ILF2 COIL G3BP2 PURG DDX5	7.61e-06	443	34	7	int:GTPBP4
Interaction	METTL3 interactions	EWSR1 SFPQ ILF2 DNAJA1 SNRPD3 DDX5	7.61e-06	287	34	6	int:METTL3
Interaction	CUL7 interactions	CSTF2 EWSR1 SFPQ ILF2 DNAJA1 SNRPD3 CHTOP EIF4A1 DDX5	7.82e-06	845	34	9	int:CUL7
Interaction	SNRNP40 interactions	LENG8 EWSR1 TCF20 COIL SNRPD3 ZC3H4 G3BP2 DDX5	8.36e-06	637	34	8	int:SNRNP40
Interaction	DHX8 interactions	LENG8 SERBP1 TCF20 COIL RBM27 PURG	8.40e-06	292	34	6	int:DHX8
Interaction	HDLBP interactions	LENG8 EWSR1 SERBP1 ILF2 COIL RBM27 SNRPD3 CHTOP G3BP2	8.60e-06	855	34	9	int:HDLBP
Interaction	CDC5L interactions	SFPQ ILF2 COIL DNAJA1 DOCK8 SNRPD3 EIF4A1 PURG DDX5	8.60e-06	855	34	9	int:CDC5L
Interaction	AHSA1 interactions	EWSR1 SFPQ SERBP1 COIL DNAJA1 DNAJA4	8.74e-06	294	34	6	int:AHSA1
Cytoband	Ensembl 112 genes in cytogenetic band chr1q21	ILF2 POLR3GL CHTOP	3.31e-03	404	34	3	chr1q21
Cytoband	1q21.3	ILF2 CHTOP	3.43e-03	117	34	2	1q21.3
Cytoband	Ensembl 112 genes in cytogenetic band chr4q21	ANTXR2 G3BP2	4.40e-03	133	34	2	chr4q21
GeneFamily	RNA binding motif containing	CSTF2 EWSR1 SFPQ RBM27 G3BP2	2.20e-06	213	19	5	725
GeneFamily	Zinc fingers RANBP2-type \|RNA binding motif containing	EWSR1 NUP153	2.17e-04	21	19	2	89
GeneFamily	Zinc fingers CCCH-type	RBM27 ZC3H4	6.10e-04	35	19	2	73
GeneFamily	DEAD-box helicases	EIF4A1 DDX5	8.79e-04	42	19	2	499
GeneFamily	DNAJ (HSP40) heat shock proteins\|C2 tensin-type domain containing	DNAJA1 DNAJA4	1.19e-03	49	19	2	584
GeneFamily	Armadillo repeat containing\|Protein phosphatase 1 regulatory subunits	SFPQ NOM1	1.52e-02	181	19	2	694
Coexpression	HOUNKPE_HOUSEKEEPING_GENES	CNBP LENG8 SFPQ SERBP1 ILF2 TSR3 DNAJA1 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1	8.76e-09	1129	34	12	M42508
Coexpression	HOUNKPE_HOUSEKEEPING_GENES	CNBP LENG8 SFPQ SERBP1 ILF2 TSR3 DNAJA1 SNRPD3 CHTOP NUP153 G3BP2 EIF4A1	1.16e-08	1158	34	12	MM1338
Coexpression	FAN_OVARY_CL1_GPRC5A_TNFRS12A_HIGH_SELECTABLE_FOLLICLE_STROMAL_CELL	CNBP EWSR1 SFPQ SERBP1 ILF2 DNAJA1 EIF4A1 DDX5	2.37e-08	380	34	8	M41703
Coexpression	HALLMARK_MYC_TARGETS_V1	CNBP CSTF2 SERBP1 ILF2 SNRPD3 EIF4A1	2.06e-07	200	34	6	M5926
Coexpression	FAN_OVARY_CL15_SMALL_ANTRAL_FOLLICLE_GRANULOSA_CELL	EWSR1 SFPQ DNAJA1 DNAJA4 CHTOP G3BP2 EIF4A1 DDX5	1.31e-06	644	34	8	M41717
Coexpression	SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM	CNBP SERBP1 NUP153 G3BP2 AFG3L2	1.98e-06	161	34	5	M5075
Coexpression	JIANG_MELANOMA_TRM9_CD8	CNBP SERBP1 DNAJA1 POLR3GL DOCK8 G3BP2 DDX5	4.24e-06	526	34	7	M48973
Coexpression	GSE2405_0H_VS_9H_A_PHAGOCYTOPHILUM_STIM_NEUTROPHIL_DN	CNBP SERBP1 CHTOP EIF4A1 DDX5	5.72e-06	200	34	5	M6202
Coexpression	GSE39820_TGFBETA1_VS_TGFBETA3_IN_IL6_TREATED_CD4_TCELL_UP	CSTF2 RBM27 NUP153 G3BP2 DDX5	5.72e-06	200	34	5	M5623
Coexpression	FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP	CNBP SERBP1 DNAJA1 SNRPD3 CHTOP NUP153 DDX5	7.00e-06	568	34	7	M4023
Coexpression	PUJANA_ATM_PCC_NETWORK	APBA1 CNBP EWSR1 SFPQ SERBP1 ILF2 TCF20 ZC3H4 NUP153 DDX5	7.11e-06	1394	34	10	M9585
Coexpression	TABULA_MURIS_SENIS_SPLEEN_PROERYTHROBLAST_AGEING	CNBP EWSR1 SFPQ SERBP1 ILF2 SNRPD3 CHTOP G3BP2 EIF4A1	1.09e-05	1144	34	9	MM3843
Coexpression	ZHANG_BREAST_CANCER_PROGENITORS_UP	CSTF2 EWSR1 SFPQ SERBP1 DNAJA1 G3BP2	1.81e-05	434	34	6	M15150
Coexpression	ZHANG_BREAST_CANCER_PROGENITORS_UP	CSTF2 EWSR1 SFPQ SERBP1 DNAJA1 G3BP2	2.16e-05	448	34	6	MM1044
Coexpression	KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN	EWSR1 SFPQ SERBP1 ANTXR2 COIL TSR3 DNAJA1 DNAJA4	2.27e-05	950	34	8	M19907
Coexpression	PUJANA_CHEK2_PCC_NETWORK	CNBP EWSR1 SFPQ ILF2 TCF20 SNRPD3 NUP153	4.59e-05	761	34	7	M11961
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	CNBP ANTXR2 RBM27 POLR3GL DOCK8 SRGAP3 NUP153 G3BP2 DDX5	8.78e-05	1492	34	9	M40023
Coexpression	GINESTIER_BREAST_CANCER_20Q13_AMPLIFICATION_DN	LENG8 EWSR1 SFPQ CHTOP	9.24e-05	184	34	4	M19988
Coexpression	CAIRO_HEPATOBLASTOMA_CLASSES_UP	SFPQ SERBP1 ILF2 COIL NUP153 EIF4A1	1.22e-04	612	34	6	M4772
Coexpression	GSE7852_THYMUS_VS_FAT_TCONV_DN	XDH PLD2 ANTXR2 DNAJA4	1.28e-04	200	34	4	M5750
Coexpression	HAY_BONE_MARROW_ERYTHROBLAST	CSTF2 SERBP1 ILF2 DNAJA1 KIF26A DNAJA4 SNRPD3 AFG3L2	1.75e-04	1271	34	8	M39197
Coexpression	TABULA_MURIS_SENIS_MESENTERIC_ADIPOSE_TISSUE_MESENCHYMAL_STEM_CELL_OF_ADIPOSE_AGEING	EWSR1 SERBP1 DNAJA1 POLR3GL G3BP2 EIF4A1	2.25e-04	685	34	6	MM3782
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	SFPQ TCF20 RBM27 SNRPD3 EIF4A1	3.19e-04	467	34	5	M1347
Coexpression	BENPORATH_SOX2_TARGETS	SFPQ ILF2 TCF20 KIF26A SNRPD3 DDX5	3.25e-04	734	34	6	M3835
Coexpression	TABULA_MURIS_SENIS_LARGE_INTESTINE_SECRETORY_CELL_AGEING	CNBP EWSR1 SERBP1 DNAJA1 POLR3GL CHTOP	3.25e-04	734	34	6	MM3740
Coexpression	KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN	EWSR1 SFPQ SERBP1 COIL TSR3 DNAJA1 DNAJA4	3.28e-04	1045	34	7	M8525
Coexpression	HASLINGER_B_CLL_WITH_17P13_DELETION	PLD2 EIF4A1	3.71e-04	22	34	2	M3256
Coexpression	TRAVAGLINI_LUNG_BRONCHIAL_VESSEL_2_CELL	SFPQ ILF2 DNAJA1 DDX5	4.12e-04	272	34	4	M41669
Coexpression	OUELLET_OVARIAN_CANCER_INVASIVE_VS_LMP_UP	SNRPD3 NUP153 DDX5	4.81e-04	118	34	3	M12016
Coexpression	GENTILE_UV_HIGH_DOSE_DN	COIL ZC3H4 CHTOP NUP153	5.17e-04	289	34	4	M13630
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EWSR1 SFPQ ILF2 SNRPD3 CHTOP EIF4A1	6.00e-09	188	34	6	8bd6f2cd1aadbd6f9ed31b160f59c1eff144e1dc
ToppCell	Control-Classical_Monocyte-cMono_2\|Classical_Monocyte / Disease condition and Cell class	CNBP SFPQ DNAJA1 DOCK8 DDX5	3.84e-07	197	34	5	eb7610c9496a95a5fd866e16abcbc39b83abe617
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EWSR1 SFPQ ILF2 EIF4A1	3.45e-06	136	34	4	3e13dc0634f3b05e9f9e6c3193f843f62e603b78
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2-Sox4\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EWSR1 SFPQ ILF2 EIF4A1	3.45e-06	136	34	4	0185486c39700dd2f72d79be6d283494dd8379c9
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EWSR1 SFPQ ILF2 EIF4A1	1.05e-05	180	34	4	44988c34861df359a68376500c42a64fbcc4b431
ToppCell	tumor_Lymph_Node_/_Brain-T/NK_cells-Exhausted_CD8+_T\|tumor_Lymph_Node_/_Brain / Location, Cell class and cell subclass	DOCK8 SRGAP3 G3BP2 DDX5	1.43e-05	195	34	4	f2029195d5b655120a9e84074b2583e2d89c0a1d
ToppCell	wk_08-11-Mesenchymal-Fibroblast-Early_fibro\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	SFPQ ILF2 DNAJA1 SNRPD3	1.55e-05	199	34	4	d67f5ae05daf942fb79f5b962021f37f4e275f4d
ToppCell	COVID-19-COVID-19_Mild\|COVID-19 / Disease, condition lineage and cell class	LENG8 SFPQ EIF4A1 DDX5	1.58e-05	200	34	4	62c25042086f1afd1102e0720e933c2e476468fd
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2-Sox4-POLYDENDROCYTE_(Neurogenesis.Sox4.Gad2)\|Hippocampus / BrainAtlas - Mouse McCarroll V32	SFPQ ILF2 DDX5	1.15e-04	124	34	3	1483be8700eca7e2c288784a290d945d4022b17f
ToppCell	Nasal_Brush-Immune-Dendritic_cells\|Immune / Tissue, Lineage and Cell class of Lung Cells from 10X	SFPQ DNAJA1	1.78e-04	26	34	2	e83bba14028e7684beb3dd0ec5ecf8c88245a202
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Degenerative_Outer_Medullary_Collecting_Duct_Principal_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	CSTF2 KIF26A DNAJA4	2.05e-04	151	34	3	3744e4ed87703a97002e001afd16490d525a5128
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW19\|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.	ILF2 CHTOP DDX5	2.22e-04	155	34	3	9d53caee196b5c2bbc90c4f54f693b64d4086065
ToppCell	Frontal_cortex-Macroglia-POLYDENDROCYTE\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	SFPQ ILF2 SNRPD3	2.86e-04	169	34	3	50cc0f5a022b95986949db63208a627cef9f4a69
ToppCell	3'-Broncho-tracheal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.0.5\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	LENG8 DNAJA4 SRGAP3	3.38e-04	179	34	3	6e965e424eebef50f0202cff75f458be395cfca1
ToppCell	Striatum-Macroglia-POLYDENDROCYTE-P5\|Striatum / BrainAtlas - Mouse McCarroll V32	EWSR1 SFPQ ILF2	3.61e-04	183	34	3	f20b0d71f857ac35868fd80531050ad8b6091716
ToppCell	HSPCs-Ery/Mk_prog.\|World / Lineage and Cell class	SERBP1 EIF4A1 DDX5	3.91e-04	188	34	3	5390089213cd6ee90dcdfd3c3f5b6765376cccf2
ToppCell	(02)_Cycling_Basal_(regeneration)-(1)_24hpi\|(02)_Cycling_Basal_(regeneration) / shred by cell type and Timepoint	SERBP1 DNAJA1 SNRPD3	3.97e-04	189	34	3	311f3aed469be3c8ff913dcc5a2442daa8446d55
ToppCell	PND10\|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	SFPQ SERBP1 G3BP2	4.03e-04	190	34	3	d67e2814047c8df2ae4b7bc8be9539f5df6ecef2
ToppCell	droplet-Limb_Muscle\|droplet / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ANTXR2 DNAJA1 DDX5	4.03e-04	190	34	3	06c2b13fa88abbcb8086f13b8d98a156e41e4198
ToppCell	facs-Limb_Muscle-Muscle_forelimb_and_hindlimb-18m-Mesenchymal-nan\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CNBP DNAJA4 EIF4A1	4.15e-04	192	34	3	796e04365b2ea645e14d8970c8c22ff96ddd75de
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature4_(1)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	DNAJA1 DNAJA4 NUP153	4.15e-04	192	34	3	6bba80887d6f64cf913a5c22f62baaddda417ce0
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature4_(1)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	DNAJA1 DNAJA4 NUP153	4.15e-04	192	34	3	3f925a80b5e2b0577d573e88598a2984a5f6a789
ToppCell	facs-Limb_Muscle-Muscle_forelimb_and_hindlimb-18m-Mesenchymal\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CNBP DNAJA4 EIF4A1	4.15e-04	192	34	3	0134967d36b5dac1e4646d1a555ca8bb4eeac8ef
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature4_(1)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	DNAJA1 DNAJA4 NUP153	4.22e-04	193	34	3	dbf0fe496254320c894568c31e5f9ce63707d1b5
ToppCell	E12.5\|World / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	ILF2 SNRPD3 EIF4A1	4.28e-04	194	34	3	4b335e4da58de1cd94194dc4208ce83854e5e50a
ToppCell	metastatic_Lymph_Node-T/NK_cells-CD4+_Th\|metastatic_Lymph_Node / Location, Cell class and cell subclass	SRGAP3 G3BP2 DDX5	4.28e-04	194	34	3	1ce9b4c1fbdbc5e39c03adf7ffba3d0efea81862
ToppCell	facs-Limb_Muscle-Muscle_forelimb_and_hindlimb-18m-Mesenchymal-skeletal_muscle_satellite_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CNBP DNAJA4 EIF4A1	4.35e-04	195	34	3	5ed995717bd3d35cd66442e6e84fe18fe0f7cf96
ToppCell	10x5'v1-week_17-19\|World / cell types per 3 fetal stages;per 3',per 5'	EWSR1 ILF2 SNRPD3	4.41e-04	196	34	3	31229affb48521e8be93b6061178fd8cea09ba99
ToppCell	COVID-19_Mild-Classical_Monocyte-cMono_4\|COVID-19_Mild / Disease condition and Cell class	LENG8 EIF4A1 DDX5	4.41e-04	196	34	3	3729d1444c65cad640377894decc64129bc3fd5b
ToppCell	COVID-19_Mild-Classical_Monocyte-cMono_4\|Classical_Monocyte / Disease condition and Cell class	LENG8 EIF4A1 DDX5	4.48e-04	197	34	3	e666f6580e9a20b5e550f02125706db17eec8510
ToppCell	Basal-basal-6\|World / Class top	CNBP SERBP1 EIF4A1	4.48e-04	197	34	3	b4de7ffa078d90dda243ff511ec6c503ee5d8e94
ToppCell	Basal-basal-9\|World / Class top	CNBP EIF4A1 DDX5	4.48e-04	197	34	3	66db9eeb66b378471e4bccc2e6de51053d7cfa5c
ToppCell	Control-gd_T\|Control / Disease condition and Cell class	LENG8 ILF2 EIF4A1	4.48e-04	197	34	3	000b3269c152d80527b5ad9412dd4e71b73ef1ca
ToppCell	Basal-basal-5\|World / Class top	SERBP1 EIF4A1 DDX5	4.48e-04	197	34	3	267db5fc5d59eeadbc7746af08ed6e3cb3da8f3a
ToppCell	facs-Diaphragm-Limb_Muscle-3m\|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CNBP EIF4A1 DDX5	4.48e-04	197	34	3	b0e2ea81308bce289cb7cbea0e27de1d01afeed2
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_II-F\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	DOCK8 DNAJA4 PCSK9	4.48e-04	197	34	3	b597c292fc1cb381a4325fed15a32966c38def28
ToppCell	390C-Lymphocytic-NK_cells-NK_cell_A\|NK_cells / Donor, Lineage, Cell class and subclass (all cells)	SFPQ DNAJA1 DDX5	4.54e-04	198	34	3	a1c8e5c332336823c47c04e56b6d7bc8f057c9da
ToppCell	3'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.6.1.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAJA1 DOCK8 DNAJA4	4.54e-04	198	34	3	93cc01d91ffc543fd1a717ef47e02e532b50b665
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-IPC_like-IPCs\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	ANTXR2 EIF4A1 DDX5	4.54e-04	198	34	3	b3488e916fff9a4ff62eb897d3783c93296dbd65
ToppCell	Basal-basal-7\|World / Class top	CNBP EIF4A1 DDX5	4.54e-04	198	34	3	240fe56b41b9435e62c66ac7161ef51f89e73e44
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-IPC_like\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	ANTXR2 EIF4A1 DDX5	4.54e-04	198	34	3	6d99901d4df24eb3c5cca80afd9a81eb7ee8fcf1
ToppCell	3'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.6.1.1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAJA1 DOCK8 DNAJA4	4.61e-04	199	34	3	5b6feacb0ca92c3fc6b327be978320426dcf6f68
ToppCell	myeloid-Dendritic_cell\|myeloid / Lineage, cell class and subclass	SERBP1 ILF2 EIF4A1	4.61e-04	199	34	3	b81c0a40481f1006ac4aa8759af95448cb5fc2e6
ToppCell	10x_5'_v1-Non-neoplastic-Lymphoid-CD4/CD8-Stress_sig\|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	SFPQ DNAJA1 G3BP2	4.61e-04	199	34	3	f3cc3cda38f78d1d12d865df339d93c5fecf19f2
ToppCell	myeloid-Dendritic_cell-Conventional_dendritic_cell\|myeloid / Lineage, cell class and subclass	SERBP1 ILF2 EIF4A1	4.61e-04	199	34	3	1e7ce1a1d6a7af18351d64b7a5334efa6dd9abc5
ToppCell	Transverse-T_cell-Th1\|T_cell / Region, Cell class and subclass	DNAJA1 DNAJA4 DDX5	4.61e-04	199	34	3	9271d9d36ffe1c169049d4340258f366916adfaf
ToppCell	3'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.6.0.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAJA1 DOCK8 DNAJA4	4.61e-04	199	34	3	fde8e3ba19d19069a4d3b8db55bfe6220cf634d5
ToppCell	10x_5'_v1-Non-neoplastic-Lymphoid-CD4/CD8-Stress_sig-Z\|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	SFPQ DNAJA1 G3BP2	4.61e-04	199	34	3	c3c73c9404a73133bfad1f9ced292f5e508ef767
ToppCell	megakaryocytic-CD34+_Megakaryoblast\|megakaryocytic / Lineage and Cell class	CNBP SFPQ ILF2	4.61e-04	199	34	3	99a65887d3c8a2cde26693dd74404b101bba9d58
ToppCell	HSPCs\|World / Lineage and Cell class	EWSR1 SERBP1 SNRPD3	4.61e-04	199	34	3	df1ffc416c6946f1ba182f242a50ee41a571d565
ToppCell	Basal-basal-10\|World / Class top	CNBP EIF4A1 DDX5	4.61e-04	199	34	3	4fadfc58102b21bf9db9d0092f3437aa78fddd99
ToppCell	Transverse-ILC\|Transverse / Region, Cell class and subclass	DNAJA1 SRGAP3 DDX5	4.68e-04	200	34	3	eb04d6ad2270d3d9ac3d1fae1bb9bedc6fca38fe
ToppCell	Transverse-ILC-ILC\|Transverse / Region, Cell class and subclass	DNAJA1 SRGAP3 DDX5	4.68e-04	200	34	3	60ec185df2f1989bf8febf75b11c46a576829be3
ToppCell	ILEUM-inflamed-(8)_Fibroblast-(8)_Activated_fibroblasts\|(8)_Fibroblast / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	ILF2 DNAJA1 EIF4A1	4.68e-04	200	34	3	2518d1758e2730b028270e76b949cebbeb7fb5ce
ToppCell	Transverse-B_cell-B_cell_memory\|B_cell / Region, Cell class and subclass	DNAJA1 DNAJA4 DDX5	4.68e-04	200	34	3	a92b5f883d95b6a3db8ceccf294aa503839f7ed3
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SFPQ DOCK8 DDX5	4.68e-04	200	34	3	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	VE\|World / Condition, Cell_class and T cell subcluster	SERBP1 TSR3 SNRPD3	4.68e-04	200	34	3	8ae7cb81de3ffac5acdf3466d4b516d80cac95d3
ToppCell	Transverse-(3)_ILC-(30)_ILC\|Transverse / shred on region, Cell_type, and subtype	DNAJA1 SRGAP3 DDX5	4.68e-04	200	34	3	528520dc98775aca6cc7568fedf5906ea55e0bea
ToppCell	Transverse-(3)_ILC\|Transverse / shred on region, Cell_type, and subtype	DNAJA1 SRGAP3 DDX5	4.68e-04	200	34	3	c1ad7cb012e1c8911e417f7d64ca662c4f5010e0
ToppCell	(12)_Th1\|World / shred on Cell_type and subtype	DNAJA1 DNAJA4 DDX5	4.82e-04	202	34	3	83a9267b1a40749fba5e812901d374278f15c969
Computational	Neighborhood of TDG	SFPQ SERBP1 SNRPD3 NUP153	9.56e-07	35	24	4	GNF2_TDG
Computational	Neighborhood of MLH1	SERBP1 ILF2 SNRPD3 NUP153	2.02e-06	42	24	4	GNF2_MLH1
Computational	TFs and nuclear.	EWSR1 SFPQ ILF2 COIL NUP153 DDX5	1.04e-05	237	24	6	MODULE_252
Computational	Genes in the cancer module 32.	CSTF2 EWSR1 SFPQ ILF2 SNRPD3 EIF4A1	1.14e-05	241	24	6	MODULE_32
Computational	Genes in the cancer module 98.	CSTF2 EWSR1 SFPQ ILF2 COIL NUP153 DDX5	1.67e-05	393	24	7	MODULE_98
Computational	Neighborhood of XRCC5	SFPQ ILF2 SNRPD3 EIF4A1	2.09e-05	75	24	4	GNF2_XRCC5
Computational	Genes in the cancer module 198.	EWSR1 SFPQ ILF2 COIL NUP153 DDX5	4.18e-05	303	24	6	MODULE_198
Computational	Neighborhood of APEX1	SFPQ SERBP1 ILF2 SNRPD3	4.68e-05	92	24	4	GNF2_APEX1
Computational	Neighborhood of G22P1	ILF2 SNRPD3 EIF4A1	6.65e-05	36	24	3	GNF2_G22P1
Computational	Neighborhood of RAF1	ILF2 EIF4A1 DDX5	1.14e-04	43	24	3	GCM_RAF1
Computational	Neighborhood of ACTG1	CNBP ILF2 SNRPD3 EIF4A1	1.50e-04	124	24	4	GCM_ACTG1
Computational	Neighborhood of PPP2CA	CNBP ILF2 G3BP2 AFG3L2	1.75e-04	129	24	4	MORF_PPP2CA
Computational	Neighborhood of EIF3S2	SERBP1 ILF2 G3BP2 EIF4A1 AFG3L2	1.79e-04	246	24	5	MORF_EIF3S2
Computational	Neighborhood of PFN1	ILF2 SNRPD3 EIF4A1	1.90e-04	51	24	3	GCM_PFN1
Computational	Neighborhood of DEK	CNBP ILF2 G3BP2 EIF4A1 AFG3L2	2.49e-04	264	24	5	MORF_DEK
Computational	Neighborhood of DEK	SFPQ SERBP1 NUP153	2.78e-04	58	24	3	GNF2_DEK
Computational	Neighborhood of MCM5	SFPQ SERBP1 NUP153	3.23e-04	61	24	3	GNF2_MCM5
Computational	Neighborhood of HDAC2	CNBP SERBP1 ILF2 G3BP2 AFG3L2	3.27e-04	280	24	5	MORF_HDAC2
Computational	Neighborhood of CBFB	ILF2 SNRPD3 DDX5	4.85e-04	70	24	3	GCM_CBFB
Computational	Neighborhood of KPNB1	SFPQ SNRPD3 NUP153	5.49e-04	73	24	3	GNF2_KPNB1
Computational	Neighborhood of SP3	CNBP COIL G3BP2	6.92e-04	79	24	3	MORF_SP3
Computational	Neighborhood of MTA1	ILF2 COIL AFG3L2	1.41e-03	101	24	3	MORF_MTA1
Computational	Neighborhood of PPP6C	CNBP COIL DNAJA1	1.54e-03	104	24	3	MORF_PPP6C
Computational	Neighborhood of SMC1L1	SFPQ NUP153	1.62e-03	27	24	2	GNF2_SMC1L1
Computational	Neighborhood of RPA1	SNRPD3 NUP153	1.74e-03	28	24	2	GNF2_RPA1
Computational	Neighborhood of APEX1	ILF2 SNRPD3 EIF4A1	2.00e-03	114	24	3	GCM_APEX1
Computational	Neighborhood of CSNK1A1	SERBP1 CHTOP	2.87e-03	36	24	2	GCM_CSNK1A1
Computational	Neighborhood of AP3D1	ILF2 G3BP2 AFG3L2	2.91e-03	130	24	3	MORF_AP3D1
Computational	Neighborhood of RAD21	ILF2 DDX5	3.03e-03	37	24	2	GCM_RAD21
Computational	Neighborhood of ANP32B	SERBP1 NUP153	3.03e-03	37	24	2	GNF2_ANP32B
Computational	Neighborhood of BUB3	SERBP1 ILF2 G3BP2 AFG3L2	3.05e-03	277	24	4	MORF_BUB3
Computational	Neighborhood of SOD1	CNBP ILF2 G3BP2 AFG3L2	3.09e-03	278	24	4	MORF_SOD1
Computational	Neighborhood of FBL	SERBP1 ILF2 EIF4A1	3.58e-03	140	24	3	MORF_FBL
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJA1 DDX5	5.48e-03	50	24	2	GAVISH_3CA_METAPROGRAM_B_CELLS_HSP_STRESS
Computational	Neighborhood of HAT1	SERBP1 NUP153	5.48e-03	50	24	2	GNF2_HAT1
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJA1 DNAJA4	5.48e-03	50	24	2	GAVISH_3CA_METAPROGRAM_MACROPHAGES_STRESS_HSP
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJA1 DNAJA4	5.48e-03	50	24	2	GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_HEAT_SHOCK
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJA1 DNAJA4	5.48e-03	50	24	2	GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_STRESS_HSP
Computational	Genes upregulated in subsets of cells of a given type within various tumors	ILF2 EIF4A1	5.48e-03	50	24	2	GAVISH_3CA_MALIGNANT_METAPROGRAM_8_PROTEASOMAL_DEGRADATION
Computational	Neighborhood of PPP1CC	SERBP1 G3BP2 AFG3L2	5.77e-03	166	24	3	MORF_PPP1CC
Computational	Neighborhood of USP5	ILF2 AFG3L2	5.92e-03	52	24	2	MORF_USP5
Computational	Neighborhood of BAG5	CNBP COIL	6.60e-03	55	24	2	MORF_BAG5
Computational	Neighborhood of HAT1	CNBP G3BP2 AFG3L2	6.68e-03	175	24	3	MORF_HAT1
Computational	Neighborhood of PPP1CC	ILF2 SNRPD3	6.84e-03	56	24	2	GCM_PPP1CC
Computational	Neighborhood of RAD23A	ILF2 G3BP2 EIF4A1 AFG3L2	6.87e-03	348	24	4	MORF_RAD23A
Computational	Neighborhood of RAD21	CNBP ILF2 COIL	7.22e-03	180	24	3	MORF_RAD21
Computational	Neighborhood of RAB11A	CNBP COIL	7.81e-03	60	24	2	MORF_RAB11A
Computational	Neighborhood of RPA1	ILF2 COIL	8.07e-03	61	24	2	MORF_RPA1
Computational	Neighborhood of XPC	CNBP COIL	8.07e-03	61	24	2	MORF_XPC
Computational	Neighborhood of SMC1L1	CNBP G3BP2	8.33e-03	62	24	2	MORF_SMC1L1
Computational	Neighborhood of PSMC1	CNBP COIL TSR3	8.37e-03	190	24	3	MORF_PSMC1
Computational	Neighborhood of RAB1A	CNBP ILF2 COIL	8.74e-03	193	24	3	MORF_RAB1A
Computational	Neighborhood of DAP3	CNBP ILF2 AFG3L2	8.99e-03	195	24	3	MORF_DAP3
Computational	Neighborhood of DDX5	NUP153 DDX5	9.12e-03	65	24	2	GCM_DDX5
Computational	RNA splicing.	SFPQ SNRPD3	9.12e-03	65	24	2	MODULE_183
Computational	Neighborhood of SKP1A	CNBP COIL EIF4A1	1.02e-02	204	24	3	MORF_SKP1A
Computational	Neighborhood of AATF	SERBP1 ILF2 AFG3L2	1.09e-02	209	24	3	MORF_AATF
Computational	Neighborhood of CUL1	ILF2 AFG3L2	1.11e-02	72	24	2	MORF_CUL1
Computational	Neighborhood of CDK2	ILF2 AFG3L2	1.11e-02	72	24	2	MORF_CDK2
Computational	Neighborhood of NPM1	SERBP1 SNRPD3	1.11e-02	72	24	2	GNF2_NPM1
Computational	Neighborhood of AP2M1	CNBP TSR3 EIF4A1	1.20e-02	217	24	3	MORF_AP2M1
Disease	Neurodevelopmental Disorders	ILF2 DOCK8 ZC3H4 SRGAP3	3.11e-06	93	32	4	C1535926
Disease	HIV Coinfection	SFPQ ILF2 SNRPD3 EIF4A1	4.67e-06	103	32	4	C4505456
Disease	HIV Infections	SFPQ ILF2 SNRPD3 EIF4A1	4.67e-06	103	32	4	C0019693
Disease	metabolic syndrome	ZC3H4 PURG PCSK9	1.32e-03	200	32	3	EFO_0000195
Disease	essential hypertension, age at diagnosis	ANTXR2 PURG	1.69e-03	56	32	2	EFO_0004918, MONDO_0001134
Disease	Alzheimer's disease (implicated_via_orthology)	DNAJA1 DNAJA4	1.75e-03	57	32	2	DOID:10652 (implicated_via_orthology)
Disease	magnesium measurement	NOM1 G3BP2	2.34e-03	66	32	2	EFO_0004845
Disease	blood lead measurement	XDH SRGAP3	2.34e-03	66	32	2	EFO_0007040
Disease	obsolete_red blood cell distribution width	RBM27 DOCK8 DNAJA4 ZC3H4 G3BP2 EIF4A1	2.92e-03	1347	32	6	EFO_0005192

Protein segments in the cluster

Peptide	Gene	Start	Entry
GRGRGGFDRGGMSRG	EWSR1	301	Q01844
IRRGPAGIGRTGRGM	AFG3L2	271	Q9Y4W6
YGGRGVGGIKRMEVR	ANTXR2	381	P58335
RMRGSRLTGGRKGFG	SLC22A18AS	66	Q8N1D0
MFFGGGGRMARERRG	DNAJA4	91	Q8WW22
GRGGRDPRGIDARGM	CSTF2	401	P33240
FFGGGGRMQRERRGK	DNAJA1	91	P31689
TMSSQGRGRGRGRGG	RBM27	946	Q9P2N5
GRGMGRGDGFDSRGK	SERBP1	176	Q8NC51
KGRGGRGAHMDRGRG	LENG8	461	Q96PV6
EDRGSGRSRGRGGMK	DDX5	476	P17844
GRGGRFGRKGVAINM	EIF4A1	361	P60842
RSGKRRGERMEAQGG	PCSK9	491	Q8NBP7
GAKGRGMRGRGRGRG	COIL	406	P38432
EKCGRGGMSGGRSRL	KIF26A	616	Q9ULI4
GEGARGEMMRRRAPG	DOCK8	1371	Q8NF50
GPRGIVGGGMMRDRD	G3BP2	436	Q9UN86
MRGDRGRGRGGRFGS	ILF2	1	Q12905
LMRGGIAERGGVRVG	APBA1	771	Q02410
AVRGGGGKGMRIVRS	MCCC1	206	Q96RQ3
MERARRRGGGGGRGR	PURG	1	Q9UJV8
MASRGGGRGRGRGQL	POLR3GL	1	Q9BT43
GPGGSQGRVVRMKRR	NOM1	11	Q5C9Z4
AMGRGGIGGRGRGMI	CHTOP	171	Q9Y3Y2
ARECPTGGGRGRGMR	CNBP	16	P62633
TGGGRGRGMRSRGRG	CNBP	21	P62633
MSRDRFRSRGGGGGG	SFPQ	1	P23246
GFGGVMGRVRLRSDG	SRGAP3	846	O43295
RVKRMGGGFGGKETR	XDH	791	P47989
QVAARGRGRGMGRGN	SNRPD3	106	P62318
GVGGGGGKMRRERTR	NUP153	441	P49790
VPGRVGGREGMRGRS	TCF20	991	Q9UGU0
GSRGGSRGRGMGRGS	ZC3H4	251	Q9UPT8
MGRGSRGRGRGSMGG	ZC3H4	261	Q9UPT8
RGRGRGSRGRGKGMG	ZC3H4	326	Q9UPT8
GSRGRGKGMGRGRGR	ZC3H4	331	Q9UPT8
RGRGRGGSRGGMNKG	ZC3H4	341	Q9UPT8
GRKGLEGMIRKRSGG	PLD2	201	O14939
MGRRRAARGPGAEGG	TSR3	1	Q9UJK0