Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionprotein domain specific binding

STRN4 ACSL3 RUFY1 TJP1 MTOR MUSK

1.39e-03875296GO:0019904
GeneOntologyMolecularFunctiongeneral transcription initiation factor binding

MTOR HNRNPF

3.88e-0364292GO:0140296
GeneOntologyMolecularFunctioncalmodulin binding

STRN4 EEF2K TJP1

4.42e-03230293GO:0005516
GeneOntologyBiologicalProcessnegative regulation of lysosome organization

FNIP1 MTOR

1.14e-054292GO:1905672
DomainHEAT_REPEAT

HEATR5A MTOR

5.27e-0370292PS50077
DomainTPR-like_helical_dom

NAPA EEF2K MTOR

5.51e-03233293IPR011990
Pubmed

Grainyhead-like 2 downstream targets act to suppress epithelial-to-mesenchymal transition during neural tube closure.

GRHL3 TJP1 ESRP1

3.52e-071729326903501
Pubmed

Stage-dependent therapeutic efficacy in PI3K/mTOR-driven squamous cell carcinoma of the skin.

GRHL3 MTOR

6.71e-07229229238073
Pubmed

Fluoxetine induces autophagic cell death via eEF2K-AMPK-mTOR-ULK complex axis in triple negative breast cancer.

EEF2K MTOR

6.71e-07229229094413
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

STRN4 MTR RPL29 EEF2K GET4 RUFY1 MTOR HNRNPF KIF1B

1.80e-06145529922863883
Pubmed

Mammalian target of rapamycin (mTOR) activation increases axonal growth capacity of injured peripheral nerves.

MTOR AVIL

2.01e-06329220615870
Pubmed

Involvement of heterogeneous ribonucleoprotein F in the regulation of cell proliferation via the mammalian target of rapamycin/S6 kinase 2 pathway.

MTOR HNRNPF

2.01e-06329220308064
Pubmed

Substrate trapping proteomics reveals targets of the βTrCP2/FBXW11 ubiquitin ligase.

FNIP1 EEF2K FOXN2 TJP1

3.87e-0612829425332235
Pubmed

Syntaxin13 expression is regulated by mammalian target of rapamycin (mTOR) in injured neurons to promote axon regeneration.

MTOR AVIL

4.02e-06429224737317
Pubmed

The tight junction protein TJP1 regulates the feeding-modulated hepatic circadian clock.

TJP1 MTOR

4.02e-06429232001717
Pubmed

Levels of mTOR and its downstream targets 4E-BP1, eEF2, and eEF2 kinase in relationships with tau in Alzheimer's disease brain.

EEF2K MTOR

4.02e-06429216098202
Pubmed

A COFRADIC protocol to study protein ubiquitination.

MTR GET4 ARID3A HNRNPF

4.64e-0613429424816145
Pubmed

The armadillo repeat domain of the APC tumor suppressor protein interacts with Striatin family members.

STRN4 TJP1

6.70e-06529218502210
Pubmed

Rapamycin-Resistant mTOR Activity Is Required for Sensory Axon Regeneration Induced by a Conditioning Lesion.

MTOR AVIL

6.70e-06529228101526
Pubmed

Esrp1-Regulated Splicing of Arhgef11 Isoforms Is Required for Epithelial Tight Junction Integrity.

TJP1 ESRP1

1.00e-05629230485810
Pubmed

Folliculin encoded by the BHD gene interacts with a binding protein, FNIP1, and AMPK, and is involved in AMPK and mTOR signaling.

FNIP1 MTOR

1.41e-05729217028174
Pubmed

BRN2 as a key gene drives the early primate telencephalon development.

SOX1 TJP1

1.87e-05829235245119
Pubmed

Periderm Fate during Palatogenesis: TGF-β and Periderm Dedifferentiation.

GRHL3 TJP1

2.41e-05929236751050
Pubmed

Proximity labeling of endogenous RICTOR identifies mTOR complex 2 regulation by ADP ribosylation factor ARF1.

STRN4 ACSL3 TJP1 MTOR

2.99e-0521529435973513
Pubmed

Structure of S6 kinase 1 determines whether raptor-mTOR or rictor-mTOR phosphorylates its hydrophobic motif site.

EEF2K MTOR

3.01e-051029215809305
Pubmed

Crumbs2 mediates ventricular layer remodelling to form the spinal cord central canal.

SOX1 TJP1

3.01e-051029232150534
Pubmed

BioID-based Identification of Skp Cullin F-box (SCF)β-TrCP1/2 E3 Ligase Substrates.

MTR FNIP1 EEF2K TJP1

3.63e-0522629425900982
Pubmed

cdc2-cyclin B regulates eEF2 kinase activity in a cell cycle- and amino acid-dependent manner.

EEF2K MTOR

5.21e-051329218337751
Pubmed

mTORC1 signaling and primary cilia are required for brain ventricle morphogenesis.

TJP1 MTOR

5.21e-051329227993979
Pubmed

Epithelial Migration and Non-adhesive Periderm Are Required for Digit Separation during Mammalian Development.

GRHL3 TJP1

6.07e-051429232109382
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

FNIP1 TJP1 MTOR TMCC1 MUSK KIF1B

6.60e-0586129636931259
Pubmed

Deletion of Yy1 in mouse lung epithelium unveils molecular mechanisms governing pleuropulmonary blastoma pathogenesis.

TJP1 ESRP1

7.00e-051529233158935
Pubmed

The transcription factor grainyhead-like 2 regulates the molecular composition of the epithelial apical junctional complex.

GRHL3 TJP1

8.00e-051629220978075
Pubmed

The Mediator complex protein Med31 is required for embryonic growth and cell proliferation during mammalian development.

MTOR MED31

1.02e-041829220347762
Pubmed

CAMSAP3 is required for mTORC1-dependent ependymal cell growth and lateral ventricle shaping in mouse brains.

TJP1 MTOR

1.02e-041829233462112
Pubmed

Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.

ACSL3 NAPA RPL29 TJP1 MTOR HNRNPF KIF1B

1.04e-04136729732687490
Pubmed

OTUB2 stabilizes U2AF2 to promote the Warburg effect and tumorigenesis via the AKT/mTOR signaling pathway in non-small cell lung cancer.

MTOR HNRNPF

1.40e-042129230662561
Pubmed

Regulation of Hematopoiesis and Methionine Homeostasis by mTORC1 Inhibitor NPRL2.

MTR MTOR

1.53e-042229226166573
Pubmed

Uncovering quantitative protein interaction networks for mouse PDZ domains using protein microarrays.

TJP1 KIF1B

1.68e-042329216637659
Pubmed

Mitochondrial antiviral-signalling protein is a client of the BAG6 protein quality control complex.

RPL29 GET4

1.83e-042429235543156
Pubmed

High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities.

HNRNPF ISY1

1.99e-042529226627737
Pubmed

Defects in the cappuccino (cno) gene on mouse chromosome 5 and human 4p cause Hermansky-Pudlak syndrome by an AP-3-independent mechanism.

SOX1 MTR

1.99e-042529211110696
Pubmed

Discovery and Characterization of ZUFSP/ZUP1, a Distinct Deubiquitinase Class Important for Genome Stability.

IFT80 TJP1 MTOR

2.49e-0414729329576527
Pubmed

Inactivation of Zeb1 in GRHL2-deficient mouse embryos rescues mid-gestation viability and secondary palate closure.

GRHL3 ESRP1

2.50e-042829232005677
Pubmed

Transcription factor protein interactomes reveal genetic determinants in heart disease.

ARID3A LCORL HNRNPF MED31

3.61e-0441129435182466
Pubmed

mTOR plays a pivotal role in multiple processes of enamel organ development principally through the mTORC1 pathway and in part via regulating cytoskeleton dynamics.

TJP1 MTOR

3.70e-043429232866472
Pubmed

BCAR1 promotes proliferation and cell growth in lung adenocarcinoma via upregulation of POLR2A.

MTR ARID3A MTOR ISY1

3.89e-0441929433001583
Pubmed

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.

RPL29 TJP1 HNRNPF

3.95e-0417229326336360
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

RPL29 EEF2K RUFY1 TJP1 KIF1B

4.18e-0477729535844135
Pubmed

Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.

MTR GET4 HNRNPF

4.51e-0418029321139048
Pubmed

Network organization of the human autophagy system.

NAPA FNIP1 TJP1 MTOR

4.55e-0443729420562859
Pubmed

Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions.

STRN4 ACSL3 TJP1 KIF1B

4.92e-0444629424255178
Pubmed

WD40-repeat 47, a microtubule-associated protein, is essential for brain development and autophagy.

IFT80 MTOR

5.13e-044029229078390
Pubmed

Interactomic analysis of REST/NRSF and implications of its functional links with the transcription suppressor TRIM28 during neuronal differentiation.

STRN4 RPL29 HNRNPF

6.59e-0420529327976729
Pubmed

Fibril treatment changes protein interactions of tau and α-synuclein in human neurons.

ACSL3 NAPA TJP1 HNRNPF

7.43e-0449829436634849
Cytoband1p36.2

MTOR KIF1B

2.99e-05132921p36.2
CytobandEnsembl 112 genes in cytogenetic band chr4p15

FAM184B LCORL

3.31e-03135292chr4p15
CytobandEnsembl 112 genes in cytogenetic band chr1p36

GRHL3 MTOR KIF1B

8.91e-03681293chr1p36
Cytoband19p13.3

ARID3A CAPS

9.83e-0323729219p13.3
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Oligoastrocytoma-3|TCGA-Brain / Sample_Type by Project: Shred V9

HEATR5A GRHL3 TMCC1 KIF1B

1.74e-061352943351e8b9e417397c5fa9f856184ff24ce1a27242
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6|TCGA-Prostate / Sample_Type by Project: Shred V9

FOXN2 HEATR5A LCORL KIF1B

7.17e-06193294abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
Diseaseresponse to interferon-beta

GRHL3 LCORL

1.56e-057262GO_0035456
Diseasecorneal topography

LCORL TJP1 MTOR

1.20e-04109263EFO_0004345
DiseaseCleft upper lip

MTR GRHL3

5.42e-0439262C0008924
Diseaseserum alanine aminotransferase measurement

FOXN2 IFT80 GRHL3 LCORL MUSK

8.61e-04869265EFO_0004735
Diseasesusceptibility to shingles measurement

RUFY1 LCORL

2.32e-0381262EFO_0008401
Diseasenon-high density lipoprotein cholesterol measurement

HEATR5A IFT80 LCORL MUSK

3.31e-03713264EFO_0005689

Protein segments in the cluster

PeptideGeneStartEntry
DAAAIMRITADMKNA

AVIL

731

O75366
SMDAVDATMEKLRAQ

CAPS

86

Q13938
AFIQMKSADRAFMAA

ESRP1

491

Q6NXG1
MARNAEKAMTALARF

ISY1

1

Q9ULR0
MDAGNKARTVAATNM

KIF1B

196

O60333
MAAAVAMETDDAGNR

MED31

1

Q9Y3C7
MDKGRERMAAAAAAA

LCORL

1

Q8N3X6
HRKEMQAMVADFSSA

FAM184B

861

Q9ULE4
AAMAVANRDMTTAEI

IFT80

621

Q9P2H3
MAVRCAAAKNEAIFM

HEATR5A

191

Q86XA9
TAATKAMMRVNGDDD

GRHL3

41

Q8TE85
EQAMKMSRRSADASQ

FNIP1

371

Q8TF40
RNLKESDIDAAAAMM

FOXN2

231

P32314
AAEAAMEAMKGRLAN

EEF2K

696

O00418
SMAAFANAARIAIMK

EFCAB3

201

Q8N7B9
DETQAKMARMAAAAA

MTOR

1506

P42345
AVAAMSKDRANMQHR

HNRNPF

341

P52597
KMQANNAKAMSARAE

RPL29

56

P47914
MAAAAAMAEQESARN

GET4

1

Q7L5D6
ARAASKCQMMEERAN

RUFY1

101

Q96T51
RMNMCSAGVARKAAE

MTR

116

Q99707
MDNSGKEAEAMALLA

NAPA

1

P54920
VAAAAAAAAMMQEAQ

SOX1

196

O00570
MAAVEALGAKASMEN

ACSL3

256

O95573
SARMQRAQMAALAAM

ARID3A

51

Q99856
SAMMEIACAAAAAAA

TMCC1

166

O94876
MSARAAAAKSTAMEE

TJP1

1

Q07157
MMEERAAAAVAAAAS

STRN4

1

Q9NRL3
SADMQADFQREAALM

MUSK

616

O15146