Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyCellularComponenttranscription factor TFIID complex

ERCC3 TAF1

5.10e-0447152GO:0005669
DomainHelicase_C

ERCC3 INO80

2.83e-03107142PF00271
DomainHELICc

ERCC3 INO80

2.83e-03107142SM00490
DomainHelicase_C

ERCC3 INO80

2.88e-03108142IPR001650
DomainHELICASE_CTER

ERCC3 INO80

2.93e-03109142PS51194
DomainHELICASE_ATP_BIND_1

ERCC3 INO80

2.93e-03109142PS51192
DomainDEXDc

ERCC3 INO80

2.93e-03109142SM00487
DomainHelicase_ATP-bd

ERCC3 INO80

2.99e-03110142IPR014001
DomainP-loop_NTPase

KIF17 ERCC3 INO80

2.33e-02848143IPR027417
PathwayREACTOME_HIV_TRANSCRIPTION_INITIATION

ERCC3 TAF1

3.86e-044792M29568
PathwayREACTOME_RNA_POLYMERASE_II_PROMOTER_ESCAPE

ERCC3 TAF1

4.03e-044892MM15424
PathwayREACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME

ERCC3 TAF1

8.56e-047092M27008
PathwayREACTOME_RNA_POLYMERASE_II_PRE_TRANSCRIPTION_EVENTS

ERCC3 TAF1

1.14e-038192M865
PathwayREACTOME_GLOBAL_GENOME_NUCLEOTIDE_EXCISION_REPAIR_GG_NER

ERCC3 INO80

1.20e-038392MM15305
PathwayREACTOME_RNA_POLYMERASE_II_PRE_TRANSCRIPTION_EVENTS

ERCC3 TAF1

1.20e-038392MM15314
PathwayREACTOME_GLOBAL_GENOME_NUCLEOTIDE_EXCISION_REPAIR_GG_NER

ERCC3 INO80

1.23e-038492M27594
PathwayREACTOME_NUCLEOTIDE_EXCISION_REPAIR

ERCC3 INO80

2.02e-0310892MM15304
PathwayREACTOME_NUCLEOTIDE_EXCISION_REPAIR

ERCC3 INO80

2.02e-0310892M7927
Pubmed

Differential dependencies of human RNA polymerase II promoters on TBP, TAF1, TFIIB and XPB.

ERCC3 TAF1

1.04e-06415235947745
Pubmed

Transcription factor IIE binds preferentially to RNA polymerase IIa and recruits TFIIH: a model for promoter clearance.

ERCC3 TAF1

6.24e-0691527926747
Pubmed

The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.

LUC7L3 AP3D1 TAF1

1.15e-0510415331365120
Pubmed

cDNA sequence of a growth factor-inducible immediate early gene and characterization of its encoded protein.

LUC7L3 AP3D1

1.82e-05151521741163
Pubmed

A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities.

LUC7L3 TAF1 INO80

5.93e-0518015324104479
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

ERCC3 TAF1 VTN INO80

6.51e-0553315430554943
Pubmed

Three transitions in the RNA polymerase II transcription complex during initiation.

ERCC3 TAF1

1.27e-04391529405375
Pubmed

Association of Tat with purified HIV-1 and HIV-2 transcription preinitiation complexes.

ERCC3 TAF1

1.27e-04391529054383
Pubmed

The general transcription factors of RNA polymerase II.

ERCC3 TAF1

1.27e-04391528946909
Pubmed

ATP activates transcription initiation from promoters by RNA polymerase II in a reversible step prior to RNA synthesis.

ERCC3 TAF1

1.34e-04401522449431
Pubmed

Abortive initiation is increased only for the weakest members of a set of down mutants of the adenovirus 2 major late promoter.

ERCC3 TAF1

1.34e-04401521939271
Pubmed

Tat-SF1: cofactor for stimulation of transcriptional elongation by HIV-1 Tat.

ERCC3 TAF1

1.78e-04461528849451
Pubmed

Insights into the ubiquitin-proteasome system of human embryonic stem cells.

LUC7L3 AP3D1 TAF1

1.94e-0426915329511261
Pubmed

Gene expression and cell identity controlled by anaphase-promoting complex.

TAF1 INO80

3.89e-046815232076268
CytobandEnsembl 112 genes in cytogenetic band chr17q11

TP53I13 VTN

1.40e-03171152chr17q11
GeneFamilyDNA helicases

ERCC3 INO80

2.98e-0517921167
ToppCellfacs-Trachea-nan-18m-Epithelial-mucus_secreting_cell|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ELFN1 C14orf93 SLC9A3

2.13e-051651537e7643834ed483aec04f513cca38d6367fda9ff8

Protein segments in the cluster

PeptideGeneStartEntry
RRKKYDHLRKDTARK

ZNF280B

71

Q86YH2
RRRRRQEEKHKKAAS

ELFN1

441

P0C7U0
RRHRQKLEKDKRRKK

AP3D1

731

O14617
RRRRRKQRKKKAWIY

TP53I13

131

Q8NBR0
TNRVKERKRKREKYA

INO80

1291

Q9ULG1
KYVKVRHKAREIRNK

KIAA0232

311

Q92628
RDRKSYKHRSKSRDR

LUC7L3

356

O95232
KEKEEKKLRSRRYRL

C14orf93

386

Q9H972
RADRDKKKSRKRHYE

ERCC3

6

P19447
KDLKEKHKRRKRYAD

KIF17

761

Q9P2E2
KHKRRKRYADERRKQ

KIF17

766

Q9P2E2
RSARRKRKKKHRELI

TAF1

256

P21675
KAAKLYKRERAQKRR

SLC9A3

676

P48764
RLKARKHSKRRVRDK

CLEC3A

26

O75596
YRHHKKATRTKRRRK

nan

16

Q1RN00
RRRQERERQYRKDKK

TCHH

951

Q07283
AKKQRFRHRNRKGYR

VTN

366

P04004