Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	histone binding	PTMS RNF20 KMT2A CHD4 KDM7A HDAC2	2.62e-04	265	67	6	GO:0042393
GeneOntologyMolecularFunction	DNA secondary structure binding	KMT2A XPC SMC5	3.51e-04	41	67	3	GO:0000217
GeneOntologyMolecularFunction	ATP hydrolysis activity	PSMC2 DDX23 MCM3 AK9 CHD4 SMC5 KIF13A	6.78e-04	441	67	7	GO:0016887
GeneOntologyMolecularFunction	histone ubiquitin ligase activity	RNF20 HUWE1	7.16e-04	12	67	2	GO:0140852
GeneOntologyMolecularFunction	chromatin binding	PBRM1 POLR1A WDHD1 RNF20 KMT2A CHD4 RERE DNMT1 HDAC2	7.77e-04	739	67	9	GO:0003682
GeneOntologyMolecularFunction	histone modifying activity	RNF20 KMT2A KDM7A HUWE1 HDAC2	1.03e-03	229	67	5	GO:0140993
GeneOntologyMolecularFunction	tropomyosin binding	LMOD1 TNNT3	1.13e-03	15	67	2	GO:0005523
GeneOntologyBiologicalProcess	RNA splicing	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 ZNF638 DDX23 SRSF11 UPF3B SREK1 PRPF40A	6.74e-08	502	67	12	GO:0008380
GeneOntologyBiologicalProcess	protein-DNA complex organization	TAF3 PBRM1 WDHD1 ARID4A RNF20 DDX23 KMT2A RNF40 CHD4 KDM7A RERE HUWE1 SMC5 TASOR2 DNMT1 HDAC2	8.90e-08	999	67	16	GO:0071824
GeneOntologyBiologicalProcess	chromatin organization	PBRM1 WDHD1 ARID4A RNF20 DDX23 KMT2A RNF40 CHD4 KDM7A RERE HUWE1 SMC5 TASOR2 DNMT1 HDAC2	1.37e-07	896	67	15	GO:0006325
GeneOntologyBiologicalProcess	chromatin remodeling	PBRM1 WDHD1 ARID4A RNF20 DDX23 KMT2A CHD4 KDM7A RERE HUWE1 TASOR2 DNMT1 HDAC2	6.33e-07	741	67	13	GO:0006338
GeneOntologyBiologicalProcess	mRNA processing	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 DDX23 SRSF11 UPF3B SREK1 PRPF40A	1.49e-06	551	67	11	GO:0006397
GeneOntologyBiologicalProcess	mRNA splicing, via spliceosome	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 DDX23 UPF3B PRPF40A	2.28e-06	358	67	9	GO:0000398
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 DDX23 UPF3B PRPF40A	2.28e-06	358	67	9	GO:0000377
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 DDX23 UPF3B PRPF40A	2.50e-06	362	67	9	GO:0000375
GeneOntologyBiologicalProcess	mRNA metabolic process	SNRNP27 SRRM1 TAF3 LUC7L3 RNPS1 SF3A1 FRG1 DDX23 SRSF11 UPF3B SREK1 LARP1B PRPF40A	6.64e-06	917	67	13	GO:0016071
GeneOntologyBiologicalProcess	mRNA cis splicing, via spliceosome	SF3A1 DDX23 UPF3B PRPF40A	1.63e-05	47	67	4	GO:0045292
GeneOntologyBiologicalProcess	circadian regulation of gene expression	KMT2A ZFHX3 HUWE1 HDAC2	1.04e-04	75	67	4	GO:0032922
GeneOntologyBiologicalProcess	DNA repair	LIG1 PBRM1 WDHD1 MCM3 CHD4 XPC HUWE1 RRM1 SMC5	2.37e-04	648	67	9	GO:0006281
GeneOntologyBiologicalProcess	RNA processing	SNRNP27 SRRM1 WDHD1 TFB1M LUC7L3 RNPS1 SF3A1 FRG1 ZNF638 DDX23 SRSF11 UPF3B SREK1 PRPF40A	2.76e-04	1500	67	14	GO:0006396
GeneOntologyBiologicalProcess	negative regulation of gene expression, epigenetic	WDHD1 KMT2A TASOR2 DNMT1 HDAC2	5.18e-04	203	67	5	GO:0045814
GeneOntologyCellularComponent	nuclear protein-containing complex	SNRNP27 SRRM1 TAF3 PBRM1 POLR1A LUC7L3 ARID4A RNPS1 SF3A1 FRG1 DDX23 KMT2A MCM3 CHD4 XPC UPF3B SREK1 RERE PRPF40A HDAC2	8.02e-09	1377	68	20	GO:0140513
GeneOntologyCellularComponent	nuclear speck	SRRM1 LUC7L3 RNPS1 SF3A1 ZNF638 COP1 SRSF11 SREK1 SMC5 PRPF40A	1.25e-06	431	68	10	GO:0016607
GeneOntologyCellularComponent	nuclear body	SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 ZNF638 COP1 SRSF11 ZFHX3 SREK1 RERE SMC5 PRPF40A	5.78e-06	903	68	13	GO:0016604
GeneOntologyCellularComponent	spliceosomal complex	SRRM1 LUC7L3 SF3A1 FRG1 DDX23 SREK1 PRPF40A	6.29e-06	215	68	7	GO:0005681
GeneOntologyCellularComponent	spliceosomal snRNP complex	SNRNP27 LUC7L3 SF3A1 DDX23 PRPF40A	1.52e-05	96	68	5	GO:0097525
GeneOntologyCellularComponent	small nuclear ribonucleoprotein complex	SNRNP27 LUC7L3 SF3A1 DDX23 PRPF40A	2.58e-05	107	68	5	GO:0030532
GeneOntologyCellularComponent	U2-type prespliceosome	LUC7L3 SF3A1 PRPF40A	2.59e-05	18	68	3	GO:0071004
GeneOntologyCellularComponent	prespliceosome	LUC7L3 SF3A1 PRPF40A	2.59e-05	18	68	3	GO:0071010
GeneOntologyCellularComponent	Sm-like protein family complex	SNRNP27 LUC7L3 SF3A1 DDX23 PRPF40A	4.30e-05	119	68	5	GO:0120114
GeneOntologyCellularComponent	HULC complex	RNF20 RNF40	6.23e-05	4	68	2	GO:0033503
GeneOntologyCellularComponent	chromosomal region	PBRM1 WDHD1 PPP1R12A MCM3 CHD4 SMC5 DNMT1 HDAC2	6.51e-05	421	68	8	GO:0098687
GeneOntologyCellularComponent	replication fork	WDHD1 MCM3 DNMT1 HDAC2	1.16e-04	77	68	4	GO:0005657
GeneOntologyCellularComponent	histone deacetylase complex	ARID4A CHD4 RERE HDAC2	1.70e-04	85	68	4	GO:0000118
GeneOntologyCellularComponent	catalytic step 2 spliceosome	SRRM1 SF3A1 FRG1 DDX23	2.83e-04	97	68	4	GO:0071013
GeneOntologyCellularComponent	ubiquitin conjugating enzyme complex	RNF20 RNF40	3.70e-04	9	68	2	GO:0031371
GeneOntologyCellularComponent	CHD-type complex	CHD4 HDAC2	1.37e-03	17	68	2	GO:0090545
GeneOntologyCellularComponent	NuRD complex	CHD4 HDAC2	1.37e-03	17	68	2	GO:0016581
GeneOntologyCellularComponent	nuclear chromosome	PBRM1 WDHD1 ARID4A MCM3 HDAC2	1.42e-03	254	68	5	GO:0000228
GeneOntologyCellularComponent	chromosome, centromeric region	PBRM1 WDHD1 PPP1R12A SMC5 DNMT1	2.05e-03	276	68	5	GO:0000775
GeneOntologyCellularComponent	exon-exon junction complex	RNPS1 UPF3B	2.10e-03	21	68	2	GO:0035145
GeneOntologyCellularComponent	Sin3-type complex	ARID4A HDAC2	2.31e-03	22	68	2	GO:0070822
GeneOntologyCellularComponent	chromosome, telomeric region	MCM3 CHD4 SMC5 HDAC2	2.60e-03	176	68	4	GO:0000781
GeneOntologyCellularComponent	striated muscle thin filament	LMOD1 TNNT3	3.47e-03	27	68	2	GO:0005865
GeneOntologyCellularComponent	SWI/SNF superfamily-type complex	PBRM1 CHD4 HDAC2	3.79e-03	96	68	3	GO:0070603
GeneOntologyCellularComponent	transferase complex	TAF3 POLR1A RNF20 COP1 KMT2A MCM3 RNF40 SMC5 HDAC2	3.86e-03	963	68	9	GO:1990234
GeneOntologyCellularComponent	U2-type spliceosomal complex	LUC7L3 SF3A1 PRPF40A	3.90e-03	97	68	3	GO:0005684
GeneOntologyCellularComponent	myofilament	LMOD1 TNNT3	4.86e-03	32	68	2	GO:0036379
GeneOntologyCellularComponent	U1 snRNP	LUC7L3 PRPF40A	5.16e-03	33	68	2	GO:0005685
GeneOntologyCellularComponent	nuclear DNA-directed RNA polymerase complex	TAF3 POLR1A MCM3	5.97e-03	113	68	3	GO:0055029
GeneOntologyCellularComponent	DNA-directed RNA polymerase complex	TAF3 POLR1A MCM3	6.42e-03	116	68	3	GO:0000428
GeneOntologyCellularComponent	RNA polymerase complex	TAF3 POLR1A MCM3	6.89e-03	119	68	3	GO:0030880
GeneOntologyCellularComponent	ficolin-1-rich granule lumen	PSMC2 PDAP1 HUWE1	7.71e-03	124	68	3	GO:1904813
GeneOntologyCellularComponent	nuclear replication fork	WDHD1 MCM3	8.25e-03	42	68	2	GO:0043596
GeneOntologyCellularComponent	ATPase complex	PBRM1 CHD4 HDAC2	8.59e-03	129	68	3	GO:1904949
GeneOntologyCellularComponent	sarcomere	FRG1 PPP1R12A LMOD1 TNNT3	8.82e-03	249	68	4	GO:0030017
HumanPheno	Short palpebral fissure	POLR1A PPP1R12A KMT2A CHD4 HUWE1 SMC5	1.58e-05	122	24	6	HP:0012745
MousePheno	embryonic lethality prior to organogenesis	SNRNP27 POLR1A WDHD1 LUC7L3 ARGLU1 SF3A1 PPP1R12A RNF20 ZNF638 EIF5B KMT2A SRSF11 RNF40 CHD4 RRM1 PRPF40A	1.26e-05	1204	56	16	MP:0013292
MousePheno	embryonic lethality prior to tooth bud stage	SNRNP27 POLR1A WDHD1 LUC7L3 ARGLU1 SF3A1 PPP1R12A RNF20 ZNF638 EIF5B KMT2A SRSF11 RNF40 CHD4 RRM1 PRPF40A DNMT1	1.74e-05	1383	56	17	MP:0013293
MousePheno	embryonic lethality before implantation	POLR1A SF3A1 RNF20 EIF5B KMT2A CHD4 RRM1	4.81e-05	242	56	7	MP:0006204
Domain	BAH	PBRM1 RERE DNMT1	7.46e-06	11	68	3	SM00439
Domain	BAH	PBRM1 RERE DNMT1	7.46e-06	11	68	3	PF01426
Domain	BAH	PBRM1 RERE DNMT1	7.46e-06	11	68	3	PS51038
Domain	BAH_dom	PBRM1 RERE DNMT1	7.46e-06	11	68	3	IPR001025
Domain	ZnF_U1	ZNF638 ZFHX3 ZMAT1	1.58e-04	29	68	3	SM00451
Domain	Znf_U1	ZNF638 ZFHX3 ZMAT1	1.58e-04	29	68	3	IPR003604
Domain	PHD	TAF3 KMT2A CHD4 KDM7A	1.61e-04	75	68	4	PF00628
Domain	Znf_PHD-finger	TAF3 KMT2A CHD4 KDM7A	1.97e-04	79	68	4	IPR019787
Domain	PHD	TAF3 KMT2A CHD4 KDM7A	3.11e-04	89	68	4	SM00249
Domain	Znf_PHD	TAF3 KMT2A CHD4 KDM7A	3.38e-04	91	68	4	IPR001965
Domain	ZF_PHD_2	TAF3 KMT2A CHD4 KDM7A	3.99e-04	95	68	4	PS50016
Domain	ZF_PHD_1	TAF3 KMT2A CHD4 KDM7A	4.15e-04	96	68	4	PS01359
Domain	Znf_CXXC	KMT2A DNMT1	7.03e-04	11	68	2	IPR002857
Domain	ZF_CXXC	KMT2A DNMT1	7.03e-04	11	68	2	PS51058
Domain	zf-CXXC	KMT2A DNMT1	7.03e-04	11	68	2	PF02008
Domain	WH2	ESPN LMOD1	1.16e-03	14	68	2	SM00246
Domain	-	TAF3 RNF20 COP1 KMT2A RNF40 CHD4 KDM7A	1.21e-03	449	68	7	3.30.40.10
Domain	Znf_RING/FYVE/PHD	TAF3 RNF20 COP1 KMT2A RNF40 CHD4 KDM7A	1.38e-03	459	68	7	IPR013083
Domain	WH2	ESPN LMOD1	1.52e-03	16	68	2	PF02205
Domain	HMG_box_dom	PBRM1 WDHD1 CHD4	1.72e-03	65	68	3	IPR009071
Domain	Zinc_finger_PHD-type_CS	TAF3 CHD4 KDM7A	1.72e-03	65	68	3	IPR019786
Domain	-	RNPS1 ZNF638 SRSF11 UPF3B SREK1	1.95e-03	244	68	5	3.30.70.330
Domain	Znf_FYVE_PHD	TAF3 KMT2A CHD4 KDM7A	2.03e-03	147	68	4	IPR011011
Domain	Nucleotide-bd_a/b_plait	RNPS1 ZNF638 SRSF11 UPF3B SREK1	2.48e-03	258	68	5	IPR012677
Domain	WH2_dom	ESPN LMOD1	2.62e-03	21	68	2	IPR003124
Domain	WH2	ESPN LMOD1	3.42e-03	24	68	2	PS51082
Domain	NA-bd_OB-fold	LIG1 CCAR1 MCM3	3.44e-03	83	68	3	IPR012340
Domain	FHA	FHAD1 KIF13A	4.64e-03	28	68	2	SM00240
Domain	FHA_DOMAIN	FHAD1 KIF13A	5.67e-03	31	68	2	PS50006
Domain	FHA	FHAD1 KIF13A	5.67e-03	31	68	2	PF00498
Domain	Chromodomain-like	ARID4A CHD4	6.04e-03	32	68	2	IPR016197
Domain	Chromo/shadow_dom	ARID4A CHD4	6.41e-03	33	68	2	IPR000953
Domain	CHROMO	ARID4A CHD4	6.41e-03	33	68	2	SM00298
Domain	RRM_1	RNPS1 ZNF638 SRSF11 SREK1	6.98e-03	208	68	4	PF00076
Pathway	REACTOME_MRNA_SPLICING	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 CCAR1 DDX23 SRSF11 UPF3B PRPF40A	4.37e-09	212	52	10	M14033
Pathway	REACTOME_MRNA_SPLICING	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 DDX23 SRSF11 UPF3B PRPF40A	4.41e-08	201	52	9	MM15411
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 CCAR1 DDX23 SRSF11 UPF3B PRPF40A	6.82e-08	283	52	10	M13087
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 DDX23 SRSF11 UPF3B PRPF40A	6.73e-07	277	52	9	MM15414
Pathway	REACTOME_METABOLISM_OF_RNA	SNRNP27 SRRM1 TFB1M LUC7L3 RNPS1 SF3A1 PSMC2 CCAR1 DDX23 SRSF11 UPF3B PRPF40A	9.51e-06	724	52	12	M16843
Pathway	REACTOME_METABOLISM_OF_RNA	SNRNP27 SRRM1 LUC7L3 RNPS1 SF3A1 PSMC2 DDX23 SRSF11 UPF3B PRPF40A	6.71e-05	612	52	10	MM15547
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION	SRRM1 RNPS1 SRSF11 UPF3B	7.84e-05	62	52	4	MM15426
Pathway	WP_MRNA_PROCESSING	SRRM1 RNPS1 SF3A1 SREK1 PRPF40A	9.78e-05	126	52	5	M39406
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION	SRRM1 RNPS1 SRSF11 UPF3B	1.06e-04	67	52	4	M27694
Pathway	REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM	SRRM1 RNPS1 SRSF11 UPF3B	2.55e-04	84	52	4	M725
Pathway	REACTOME_GENE_EXPRESSION_TRANSCRIPTION	SRRM1 TAF3 PBRM1 POLR1A RNPS1 PSMC2 KMT2A SRSF11 ZFHX3 CHD4 UPF3B DNMT1	2.71e-04	1022	52	12	MM15436
Pathway	REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM	SRRM1 RNPS1 SRSF11 UPF3B	2.80e-04	86	52	4	MM15413
Pathway	REACTOME_CHROMATIN_MODIFYING_ENZYMES	PBRM1 ARID4A KMT2A CHD4 KDM7A	4.51e-04	175	52	5	MM14941
Pathway	REACTOME_CHROMATIN_MODIFYING_ENZYMES	PBRM1 ARID4A KMT2A CHD4 KDM7A HDAC2	4.72e-04	272	52	6	M29619
Pathway	REACTOME_RNA_POLYMERASE_I_TRANSCRIPTION_INITIATION	POLR1A CHD4 HDAC2	6.85e-04	47	52	3	M1095
Pathway	REACTOME_STAT3_NUCLEAR_EVENTS_DOWNSTREAM_OF_ALK_SIGNALING	DNMT1 HDAC2	7.19e-04	11	52	2	M42523
Pathway	KEGG_SPLICEOSOME	SNRNP27 SF3A1 DDX23 PRPF40A	1.22e-03	127	52	4	M2044
Pathway	WP_MRNA_PROCESSING	SRRM1 RNPS1 SF3A1 ZNF638 SRSF11 SREK1 PRPF40A	1.26e-03	451	52	7	MM15946
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	SRRM1 LIG1 TAF3 WDHD1 ARID4A RNPS1 ARGLU1 SF3A1 RNF20 ZNF638 EIF5B CCAR1 PDAP1 KMT2A MCM3 CHD4 XPC RERE HUWE1 PRPF40A DNMT1	1.50e-18	774	69	21	15302935
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	SRRM1 TAF3 LUC7L3 ARID4A ATXN2 ARGLU1 SF3A1 ZNF638 EIF5B CCAR1 PDAP1 KMT2A MCM3 SRSF11 CHD4 SREK1 SMC5 PRPF40A TASOR2 DNMT1 HDAC2	9.99e-17	954	69	21	36373674
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	SRRM1 LIG1 TAF3 PBRM1 POLR1A LUC7L3 RNPS1 ARGLU1 SF3A1 FRG1 EIF5B PSMC2 CCAR1 DDX23 KMT2A MCM3 SRSF11 CHD4 SREK1 HUWE1 PRPF40A DNMT1 HDAC2	3.82e-16	1318	69	23	30463901
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	PBRM1 LUC7L3 RNF20 CCAR1 DDX23 MCM3 ZFHX3 RNF40 CHD4 RERE PRPF40A HDAC2	1.95e-14	220	69	12	35785414
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	SNRNP27 SRRM1 PBRM1 LUC7L3 ARID4A RNPS1 ARGLU1 SF3A1 FRG1 RNF20 ZNF638 CCAR1 DDX23 KMT2A SRSF11 RNF40 CHD4 XPC PRPF40A DNMT1 HDAC2	4.03e-14	1294	69	21	30804502
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	SNRNP27 SRRM1 TAF3 PBRM1 TFB1M LUC7L3 ATXN2 RNPS1 SF3A1 FRG1 CCAR1 DDX23 KMT2A SRSF11 CHD4 XPC UPF3B LARP1B PRPF40A DNMT1 HDAC2	1.23e-13	1371	69	21	36244648
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	SRRM1 PBRM1 POLR1A SF3A1 ZNF638 EIF5B PSMC2 CCAR1 DDX23 KMT2A CHD4 HUWE1 PRPF40A TASOR2 DNMT1 HDAC2	1.51e-13	653	69	16	22586326
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	SNRNP27 SRRM1 TAF3 LUC7L3 ARGLU1 SF3A1 FRG1 ZNF638 EIF5B CCAR1 PDAP1 DDX23 MCM3 SRSF11 CHD4 XPC SREK1 PRPF40A HDAC2	2.11e-13	1082	69	19	38697112
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	SRRM1 TFB1M LUC7L3 ATXN2 RNPS1 ARGLU1 FRG1 ZNF638 EIF5B CCAR1 DDX23 SRSF11 UPF3B SREK1 LARP1B PRPF40A	5.75e-13	713	69	16	29802200
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	SRRM1 TAF3 PBRM1 POLR1A WDHD1 ARGLU1 RNF20 EIF5B CCAR1 DDX23 KMT2A MCM3 RNF40 CHD4 SMC5 PRPF40A DNMT1 HDAC2	8.48e-13	1014	69	18	32416067
Pubmed	Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.	SRRM1 PBRM1 ARID4A RNPS1 FRG1 PPP1R12A RNF20 ZNF638 CCAR1 PDAP1 KMT2A XPC UPF3B HUWE1 CSPP1	2.02e-12	645	69	15	25281560
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	SRRM1 LUC7L3 ATXN2 RNPS1 SF3A1 ZNF638 EIF5B CCAR1 PDAP1 DDX23 SRSF11 UPF3B SREK1 LARP1B PRPF40A HDAC2	3.71e-12	807	69	16	22681889
Pubmed	Insights into the ubiquitin-proteasome system of human embryonic stem cells.	SNRNP27 SRRM1 WDHD1 LUC7L3 RNPS1 ARGLU1 EIF5B SRSF11 SREK1 PRPF40A DNMT1	5.92e-12	269	69	11	29511261
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	LIG1 LUC7L3 SF3A1 FRG1 RNF20 ZNF638 PSMC2 CCAR1 DDX23 MCM3 SRSF11 CHD4 SREK1 HUWE1 PRPF40A DNMT1 HDAC2	6.76e-12	989	69	17	36424410
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	SRRM1 LUC7L3 SF3A1 FRG1 RNF20 ZNF638 EIF5B PSMC2 PDAP1 DDX23 MCM3 RNF40 CHD4 UPF3B HUWE1 RRM1 DNMT1 HDAC2 SPINK5	2.24e-11	1415	69	19	28515276
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	ESPN SRRM1 RNPS1 PPP1R12A ITSN2 SCN9A EIF5B CCAR1 PDAP1 DDX23 KMT2A MAP7D2 SRSF11 CHD4 XPC SREK1 CFAP46 TASOR2 HDAC2	3.10e-11	1442	69	19	35575683
Pubmed	The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.	SNRNP27 SRRM1 LUC7L3 RNPS1 ARGLU1 EIF5B SREK1 PRPF40A	3.49e-11	104	69	8	31365120
Pubmed	A bead-based approach for large-scale identification of in vitro kinase substrates.	SRRM1 SF3A1 EIF5B PDAP1 MCM3 SRSF11 CHD4 PRPF40A HDAC2	3.89e-11	163	69	9	22113938
Pubmed	Identification of FUBP1 as a Long Tail Cancer Driver and Widespread Regulator of Tumor Suppressor and Oncogene Alternative Splicing.	SRRM1 LUC7L3 ATXN2 RNPS1 ZNF638 DDX23 UPF3B PRPF40A	7.35e-11	114	69	8	31553912
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	PBRM1 POLR1A ARGLU1 SF3A1 RNF20 PSMC2 DDX23 MCM3 RNF40 CHD4 UPF3B RRM1 PRPF40A DNMT1 HDAC2	9.29e-11	847	69	15	35235311
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	SRRM1 PBRM1 POLR1A LUC7L3 RNPS1 SF3A1 PPP1R12A ZNF638 CCAR1 KMT2A SRSF11 CHD4 XPC SREK1 PRPF40A	9.29e-11	847	69	15	35850772
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	SRRM1 PBRM1 POLR1A LUC7L3 RNPS1 ARGLU1 SF3A1 ZNF638 EIF5B DDX23 MCM3 SRSF11 CHD4 HUWE1 PRPF40A HDAC2	1.26e-10	1024	69	16	24711643
Pubmed	Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.	LIG1 TAF3 PBRM1 WDHD1 FRG1 ZNF638 CCAR1 KMT2A UPF3B HUWE1 TASOR2 DNMT1	1.38e-10	469	69	12	27634302
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	SRRM1 PBRM1 LUC7L3 SF3A1 ZNF638 CCAR1 DDX23 KMT2A MCM3 ZFHX3 CHD4 PRPF40A HDAC2	1.86e-10	605	69	13	28977666
Pubmed	Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.	C17orf75 LUC7L3 ATXN2 SF3A1 PPP1R12A EIF5B PSMC2 CCAR1 MAP7D2 MCM3 CHD4 SREK1 PRPF40A HDAC2	5.75e-10	809	69	14	32129710
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	PBRM1 WDHD1 SF3A1 RNF20 ZNF638 MCM3 CHD4 HUWE1 RRM1 DNMT1	1.13e-09	332	69	10	32786267
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	SRRM1 LUC7L3 ARGLU1 SF3A1 ZNF638 PSMC2 DDX23 SRSF11 CHD4 SREK1 HUWE1 PRPF40A	1.60e-09	582	69	12	20467437
Pubmed	Comprehensive proteomic analysis of the human spliceosome.	SRRM1 RNPS1 SF3A1 CCAR1 DDX23 SRSF11 UPF3B	2.25e-09	109	69	7	12226669
Pubmed	Enhancer Activity Requires CBP/P300 Bromodomain-Dependent Histone H3K27 Acetylation.	RNPS1 SF3A1 PSMC2 MCM3 SRSF11 CHD4 PRPF40A HDAC2	2.81e-09	180	69	8	30110629
Pubmed	Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes.	SRRM1 RNPS1 ARGLU1 SF3A1 CCAR1 DDX23 PRPF40A	3.27e-09	115	69	7	17332742
Pubmed	TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.	SRRM1 POLR1A TFB1M LUC7L3 ARGLU1 SF3A1 FRG1 PPP1R12A EIF5B DDX23 MCM3 CHD4 UPF3B PRPF40A	4.43e-09	949	69	14	36574265
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	SRRM1 WDHD1 ATXN2 SF3A1 FRG1 EIF5B PSMC2 MCM3 UPF3B HUWE1 LARP1B RRM1 DNMT1 HDAC2	5.92e-09	971	69	14	33306668
Pubmed	The deubiquitinase USP9X regulates FBW7 stability and suppresses colorectal cancer.	EIF5B KMT2A MCM3 CHD4 HUWE1 HDAC2	6.32e-09	71	69	6	29346117
Pubmed	Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.	SRRM1 LIG1 WDHD1 RNPS1 ARGLU1 PSMC2 CCAR1 MCM3 CHD4 HUWE1 PRPF40A DNMT1	7.06e-09	665	69	12	30457570
Pubmed	Transcription factor protein interactomes reveal genetic determinants in heart disease.	RNPS1 SF3A1 ZNF638 CCAR1 COP1 KMT2A CHD4 PRPF40A TASOR2 HDAC2	8.71e-09	411	69	10	35182466
Pubmed	Genetic Screens Reveal FEN1 and APEX2 as BRCA2 Synthetic Lethal Targets.	LIG1 WDHD1 KMT2A CHD4 HUWE1 DNMT1 HDAC2	2.85e-08	157	69	7	30686591
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	LIG1 ATXN2 SF3A1 FRG1 EIF5B CCAR1 PDAP1 DDX23 KMT2A CHD4 UPF3B RRM1 DNMT1 HDAC2	2.92e-08	1103	69	14	34189442
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	SRRM1 TAF3 PBRM1 ARID4A RNPS1 FRG1 KMT2A CHD4 XPC DNMT1 HDAC2	3.10e-08	608	69	11	36089195
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	SRRM1 TAF3 PBRM1 PPP2R5E RNPS1 ARGLU1 PPP1R12A ZFHX3 CHD4 XPC SREK1 RERE PRPF40A HDAC2	3.38e-08	1116	69	14	31753913
Pubmed	SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.	LUC7L3 ARGLU1 ZNF638 CCAR1 DDX23 KMT2A CHD4 XPC	3.76e-08	251	69	8	31076518
Pubmed	Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.	SRRM1 PBRM1 LUC7L3 EIF5B MCM3 UPF3B HUWE1 LARP1B PRPF40A DNMT1	4.21e-08	486	69	10	30940648
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	POLR1A TFB1M RNPS1 RNF20 ZNF638 EIF5B PSMC2 CCAR1 DDX23 MCM3 CHD4 XPC HUWE1 RRM1 DNMT1	5.15e-08	1353	69	15	29467282
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	POLR1A PPP1R12A SCN9A CCAR1 DDX23 KMT2A AK9 SREK1 SMC5 CSPP1	5.19e-08	497	69	10	36774506
Pubmed	NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.	SRRM1 PBRM1 KMT2A ZFHX3 CHD4 HDAC2	6.00e-08	103	69	6	32744500
Pubmed	SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.	SRRM1 LUC7L3 RNPS1 ARGLU1 EIF5B DDX23 SRSF11 CHD4 SREK1 RERE PRPF40A	6.59e-08	655	69	11	35819319
Pubmed	Charting the landscape of tandem BRCT domain-mediated protein interactions.	SRRM1 WDHD1 LUC7L3 ATXN2 SF3A1 PPP1R12A EIF5B CCAR1 DDX23 PRPF40A TULP2	8.28e-08	670	69	11	22990118
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	PBRM1 POLR1A LUC7L3 RNPS1 SF3A1 RNF20 EIF5B CCAR1 MCM3 CHD4 UPF3B SREK1 HUWE1 PRPF40A DNMT1	1.01e-07	1425	69	15	30948266
Pubmed	Human transcription factor protein interaction networks.	PTMS FHAD1 TAF3 PBRM1 ARID4A ATXN2 ZNF638 PSMC2 CCAR1 COP1 KMT2A ZFHX3 RERE PRPF40A HDAC2	1.05e-07	1429	69	15	35140242
Pubmed	In vitro nuclear interactome of the HIV-1 Tat protein.	PBRM1 LUC7L3 ZNF638 KMT2A MCM3 CHD4 HDAC2	1.26e-07	195	69	7	19454010
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	TAF3 PPP1R12A PSMC2 PDAP1 KMT2A MCM3 HUWE1 PRPF40A DNMT1 HDAC2	1.31e-07	549	69	10	38280479
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	SRRM1 RNPS1 ARGLU1 SF3A1 PPP1R12A EIF5B PSMC2 MCM3 SRSF11 CHD4 UPF3B HUWE1 PRPF40A HDAC2	1.32e-07	1247	69	14	27684187
Pubmed	Dynamic protein-protein interaction wiring of the human spliceosome.	SNRNP27 RNPS1 ARGLU1 SF3A1 FRG1 CCAR1 PRPF40A	1.35e-07	197	69	7	22365833
Pubmed	R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.	SNRNP27 SRRM1 POLR1A SF3A1 DDX23 SRSF11 CHD4 SREK1	1.48e-07	300	69	8	28561026
Pubmed	Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.	SNRNP27 RNPS1 FRG1 RNF20 EIF5B PDAP1 DDX23 SRSF11 SREK1 LARP1B PRPF40A	1.77e-07	723	69	11	34133714
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	ESPN POLR1A LUC7L3 ATXN2 PPP1R12A ZNF638 CCAR1 SRSF11 ZFHX3 ANKRD12 RERE HUWE1 ZMAT1 TASOR2 INVS	1.78e-07	1489	69	15	28611215
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	PBRM1 PPP2R5E POLR1A TFB1M ATXN2 ARGLU1 FRG1 PPP1R12A ITSN2 EIF5B CCAR1 KMT2A ZFHX3 XPC SREK1	1.91e-07	1497	69	15	31527615
Pubmed	Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.	SNRNP27 SRRM1 LUC7L3 RNPS1 ARGLU1 SF3A1 DDX23 SRSF11 CHD4 PRPF40A HDAC2	1.98e-07	731	69	11	29298432
Pubmed	Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.	SRRM1 RNF20 EIF5B PSMC2 DDX23 MCM3 CHD4 PRPF40A DNMT1	2.26e-07	441	69	9	31239290
Pubmed	Mapping the Genetic Landscape of Human Cells.	TFB1M LUC7L3 ARGLU1 RNF20 EIF5B PSMC2 MCM3 RRM1 SMC5	2.73e-07	451	69	9	30033366
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	RNPS1 SF3A1 PPP1R12A ZNF638 EIF5B PSMC2 PDAP1 KMT2A CHD4 UPF3B PRPF40A DNMT1	2.83e-07	934	69	12	33916271
Pubmed	ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.	SNRNP27 PBRM1 LUC7L3 RNPS1 SF3A1 CHD4 PRPF40A HDAC2	3.05e-07	330	69	8	33301849
Pubmed	Systematic analysis of human protein complexes identifies chromosome segregation proteins.	PTMS SNRNP27 PBRM1 PPP2R5E SF3A1 PPP1R12A ITSN2 CCAR1 DDX23 XPC SMC5 TASOR2 HDAC2	3.84e-07	1155	69	13	20360068
Pubmed	Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.	WDHD1 SF3A1 FRG1 ZNF638 EIF5B DDX23 KMT2A HDAC2	3.91e-07	341	69	8	32971831
Pubmed	The nuclear cap-binding complex is a novel target of growth factor receptor-coupled signal transduction.	SRRM1 RNPS1 UPF3B	4.16e-07	8	69	3	9933612
Pubmed	USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.	SRRM1 PBRM1 LUC7L3 PPP1R12A CCAR1 KIF13A PRPF40A	4.32e-07	234	69	7	36243803
Pubmed	The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: dynamics of mRNP remodeling.	SRRM1 RNPS1 UPF3B	6.22e-07	9	69	3	12093754
Pubmed	Systematic identification of factors for provirus silencing in embryonic stem cells.	LIG1 SF3A1 PPP1R12A CHD4 HUWE1 HDAC2	6.26e-07	153	69	6	26365490
Pubmed	Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.	WDHD1 TFB1M SF3A1 FRG1 RWDD1 DDX23 MCM3 RNF40 RRM1 DNMT1	6.38e-07	653	69	10	33742100
Pubmed	WW domains provide a platform for the assembly of multiprotein networks.	SRRM1 RNPS1 SF3A1 DDX23 SRSF11 PRPF40A	6.51e-07	154	69	6	16055720
Pubmed	ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.	SRRM1 POLR1A RNPS1 PPP1R12A EIF5B DDX23 MCM3 SRSF11 PRPF40A HDAC2	7.03e-07	660	69	10	32780723
Pubmed	Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.	PTMS SRRM1 WDHD1 SF3A1 RNF20 DDX23 SRSF11 CHD4 PRPF40A	7.11e-07	506	69	9	30890647
Pubmed	Proteomic analysis of the SIRT6 interactome: novel links to genome maintenance and cellular stress signaling.	WDHD1 RNF20 RNF40 CHD4 HDAC2	8.64e-07	87	69	5	24169447
Pubmed	Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1.	SRRM1 RNPS1 UPF3B	8.88e-07	10	69	3	11546874
Pubmed	Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.	PBRM1 RNPS1 RNF20 KMT2A RNF40 CHD4 RERE	1.07e-06	268	69	7	33640491
Pubmed	Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.	SRRM1 TAF3 PBRM1 EIF5B DDX23 KMT2A CHD4 PRPF40A DNMT1	1.09e-06	533	69	9	30554943
Pubmed	The protein interaction landscape of the human CMGC kinase group.	SNRNP27 SRRM1 LUC7L3 RNPS1 ARGLU1 CDKL3 DDX23 SREK1 HUWE1 PRPF40A	1.12e-06	695	69	10	23602568
Pubmed	Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.	PBRM1 SF3A1 ZNF638 SRSF11 CHD4 TASOR2 HDAC2	1.15e-06	271	69	7	32433965
Pubmed	WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.	SRRM1 PBRM1 POLR1A ZNF638 DDX23 KMT2A XPC HDAC2	1.16e-06	394	69	8	27248496
Pubmed	Human RNPS1 and its associated factors: a versatile alternative pre-mRNA splicing regulator in vivo.	LUC7L3 RNPS1 SRSF11	1.22e-06	11	69	3	14729963
Pubmed	Identification and Functional Characterization of a Novel Androgen Receptor Coregulator, EAP1.	RNF20 RNF40 CHD4 HDAC2	1.23e-06	40	69	4	34585037
Pubmed	KAP1 facilitates reinstatement of heterochromatin after DNA replication.	LIG1 POLR1A WDHD1 RNF20 PSMC2 CCAR1 MCM3 CHD4 HUWE1 DNMT1	1.26e-06	704	69	10	29955894
Pubmed	Mapping the MOB proteins' proximity network reveals a unique interaction between human MOB3C and the RNase P complex.	WDHD1 RNF20 PSMC2 MCM3 CHD4 HUWE1 DNMT1 HDAC2	1.27e-06	399	69	8	37536630
Pubmed	Therapeutic targeting of the USP2-E2F4 axis inhibits autophagic machinery essential for zinc homeostasis in cancer progression.	SRRM1 EIF5B CCAR1 PDAP1 SRSF11 SREK1 HUWE1 TASOR2	1.37e-06	403	69	8	35253629
Pubmed	The NuRD complex cooperates with DNMTs to maintain silencing of key colorectal tumor suppressor genes.	CHD4 DNMT1 HDAC2	1.62e-06	12	69	3	23708667
Pubmed	Analysis of the Histone H3.1 Interactome: A Suitable Chaperone for the Right Event.	PBRM1 SF3A1 CCAR1 MCM3 CHD4 DNMT1	1.72e-06	182	69	6	26527279
Pubmed	The functional interactome landscape of the human histone deacetylase family.	ARID4A SF3A1 CHD4 ANKRD12 RERE HUWE1 HDAC2	1.77e-06	289	69	7	23752268
Pubmed	Systems analysis of RhoGEF and RhoGAP regulatory proteins reveals spatially organized RAC1 signalling from integrin adhesions.	SRRM1 PPP2R5E TFB1M SF3A1 PPP1R12A ITSN2 CCAR1 KMT2A MCM3 HUWE1 HDAC2	1.80e-06	916	69	11	32203420
Pubmed	Nucleolar proteome dynamics.	FRG1 RNF20 DDX23 MCM3 CHD4 UPF3B DNMT1 HDAC2	1.83e-06	419	69	8	15635413
Pubmed	A comprehensive resource of interacting protein regions for refining human transcription factor networks.	PTMS PPP1R12A EIF5B SRSF11 SREK1 HDAC2	2.28e-06	191	69	6	20195357
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	SRRM1 LUC7L3 SF3A1 PPP1R12A EIF5B PSMC2 PDAP1 MCM3 CHD4 HUWE1 PRPF40A HDAC2	2.48e-06	1149	69	12	35446349
Pubmed	Comparative interactome analysis of α-arrestin families in human and Drosophila.	WDHD1 RNPS1 ZNF638 MCM3 HUWE1 PRPF40A HDAC2	2.99e-06	313	69	7	38270169
Pubmed	Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.	SRRM1 LIG1 ZNF638 MCM3 ZFHX3 CHD4 HUWE1 ZMAT1 TASOR2 DNMT1	3.03e-06	777	69	10	35844135
Pubmed	Reduced recognition memory is correlated with decrease in DNA methyltransferase1 and increase in histone deacetylase2 protein expression in old male mice.	DNMT1 HDAC2	3.88e-06	2	69	2	24924148
Pubmed	DNMT1 and HDAC2 Cooperate to Facilitate Aberrant Promoter Methylation in Inorganic Phosphate-Induced Endothelial-Mesenchymal Transition.	DNMT1 HDAC2	3.88e-06	2	69	2	26815200
Pubmed	Deficiency in mammalian histone H2B ubiquitin ligase Bre1 (Rnf20/Rnf40) leads to replication stress and chromosomal instability.	RNF20 RNF40	3.88e-06	2	69	2	22354749
Pubmed	Histone H2B ubiquitin ligase RNF20 is required for MLL-rearranged leukemia.	RNF20 KMT2A	3.88e-06	2	69	2	23412334
Pubmed	RNF20/RNF40 ameliorates streptozotocin-induced type 1 diabetes by activating vitamin D receptors in vivo.	RNF20 RNF40	3.88e-06	2	69	2	37422774
Pubmed	Altered Tnnt3 characterizes selective weakness of fast fibers in mice overexpressing FSHD region gene 1 (FRG1).	FRG1 TNNT3	3.88e-06	2	69	2	24305066
Pubmed	E3 Ubiquitin Ligases RNF20 and RNF40 Are Required for Double-Stranded Break (DSB) Repair: Evidence for Monoubiquitination of Histone H2B Lysine 120 as a Novel Axis of DSB Signaling and Repair.	RNF20 RNF40	3.88e-06	2	69	2	30692271
Pubmed	RNF20 and RNF40 regulate vitamin D receptor-dependent signaling in inflammatory bowel disease.	RNF20 RNF40	3.88e-06	2	69	2	34088983
Interaction	SNRNP70 interactions	SRRM1 TFB1M LUC7L3 ATXN2 RNPS1 ARGLU1 SF3A1 FRG1 PPP1R12A CDKL3 ZNF638 EIF5B CCAR1 DDX23 SRSF11 CHD4 UPF3B SREK1 LARP1B SMC5 PRPF40A HDAC2	7.39e-13	984	69	22	int:SNRNP70
Interaction	NR2C2 interactions	SRRM1 LIG1 TAF3 PBRM1 POLR1A LUC7L3 RNPS1 ARGLU1 SF3A1 FRG1 ITSN2 EIF5B PSMC2 CCAR1 DDX23 KMT2A MCM3 SRSF11 CHD4 SREK1 HUWE1 SMC5 PRPF40A DNMT1 HDAC2	1.99e-12	1403	69	25	int:NR2C2
Interaction	SMC5 interactions	SRRM1 TAF3 LUC7L3 ARID4A ATXN2 ARGLU1 SF3A1 ZNF638 EIF5B CCAR1 PDAP1 KMT2A MCM3 SRSF11 CHD4 SREK1 SMC5 PRPF40A TASOR2 DNMT1 HDAC2	9.19e-12	1000	69	21	int:SMC5
Interaction	MECP2 interactions	SNRNP27 SRRM1 TAF3 TFB1M LUC7L3 ARGLU1 SF3A1 FRG1 ZNF638 EIF5B CCAR1 PDAP1 DDX23 MCM3 SRSF11 CHD4 XPC SREK1 SMC5 PRPF40A DNMT1 HDAC2	1.41e-10	1287	69	22	int:MECP2
Interaction	SRSF7 interactions	SRRM1 LUC7L3 RNPS1 ARGLU1 SF3A1 ZNF638 COP1 DDX23 SRSF11 CHD4 SREK1 LARP1B SMC5 PRPF40A	1.50e-10	425	69	14	int:SRSF7
Interaction	NUP43 interactions	SRRM1 TAF3 PBRM1 LUC7L3 ARID4A RNPS1 ARGLU1 FRG1 PPP1R12A KMT2A ZFHX3 XPC SREK1 RERE TASOR2 HDAC2	2.52e-10	625	69	16	int:NUP43
Interaction	DDX46 interactions	SNRNP27 RNPS1 SF3A1 PSMC2 CCAR1 DDX23 SRSF11 CHD4 HUWE1 SMC5 PRPF40A	2.99e-10	227	69	11	int:DDX46
Interaction	SAP18 interactions	SRRM1 RNPS1 ARGLU1 SF3A1 DDX23 SRSF11 CHD4 UPF3B SREK1 HUWE1 PRPF40A HDAC2	4.75e-10	305	69	12	int:SAP18
Interaction	DDX23 interactions	SRRM1 TAF3 WDHD1 LUC7L3 RNPS1 ARGLU1 SF3A1 ZNF638 DDX23 SRSF11 CHD4 XPC SREK1 PRPF40A	7.31e-10	480	69	14	int:DDX23
Interaction	H2BC12 interactions	SRRM1 WDHD1 ZNF638 EIF5B PDAP1 KMT2A MAP7D2 CHD4 UPF3B HUWE1 RRM1 SMC5	8.81e-10	322	69	12	int:H2BC12
Interaction	SSRP1 interactions	SRRM1 PBRM1 POLR1A WDHD1 RNPS1 ZNF638 CCAR1 DDX23 KMT2A MCM3 CHD4 XPC SREK1 HUWE1 SMC5 PRPF40A	9.54e-10	685	69	16	int:SSRP1
Interaction	HNRNPU interactions	SRRM1 WDHD1 LUC7L3 ATXN2 RNPS1 SF3A1 FRG1 PPP1R12A PSMC2 CCAR1 DDX23 SRSF11 CHD4 SREK1 HUWE1 LARP1B SMC5 PRPF40A HDAC2	1.08e-09	1035	69	19	int:HNRNPU
Interaction	EED interactions	SRRM1 LIG1 PBRM1 LUC7L3 RNPS1 ARGLU1 SF3A1 FRG1 ITSN2 ZNF638 EIF5B PSMC2 CCAR1 MCM3 CHD4 HUWE1 RRM1 SMC5 PRPF40A TASOR2 DNMT1 HDAC2	1.26e-09	1445	69	22	int:EED
Interaction	CIT interactions	SNRNP27 SRRM1 POLR1A TFB1M LUC7L3 RNPS1 ARGLU1 SF3A1 PPP1R12A ZNF638 EIF5B DDX23 KMT2A MCM3 RNF40 CHD4 UPF3B SREK1 RRM1 CSPP1 PRPF40A HDAC2	1.35e-09	1450	69	22	int:CIT
Interaction	CHD4 interactions	SNRNP27 SRRM1 PBRM1 WDHD1 LUC7L3 SF3A1 PPP1R12A ZNF638 CCAR1 DDX23 KMT2A MCM3 ZFHX3 CHD4 SMC5 PRPF40A DNMT1 HDAC2	1.63e-09	938	69	18	int:CHD4
Interaction	SF3A3 interactions	SNRNP27 WDHD1 RNPS1 SF3A1 FRG1 ZNF638 DDX23 CHD4 SREK1 HUWE1 SMC5 PRPF40A	1.63e-09	340	69	12	int:SF3A3
Interaction	RNPS1 interactions	SRRM1 LUC7L3 RNPS1 SF3A1 ITSN2 COP1 DDX23 SRSF11 RNF40 XPC UPF3B SREK1 PRPF40A	1.80e-09	425	69	13	int:RNPS1
Interaction	SRRM1 interactions	SRRM1 RNPS1 SF3A1 ZNF638 EIF5B DDX23 SRSF11 CHD4 UPF3B HUWE1 SMC5 PRPF40A	2.12e-09	348	69	12	int:SRRM1
Interaction	SNRNP40 interactions	ESPN SNRNP27 SRRM1 LUC7L3 SF3A1 ITSN2 CCAR1 DDX23 KMT2A ZFHX3 XPC SREK1 PRPF40A TASOR2 HDAC2	3.11e-09	637	69	15	int:SNRNP40
Interaction	SIRT7 interactions	SRRM1 PBRM1 POLR1A SF3A1 ZNF638 EIF5B PSMC2 CCAR1 DDX23 KMT2A CHD4 HUWE1 PRPF40A TASOR2 DNMT1 HDAC2	3.12e-09	744	69	16	int:SIRT7
Interaction	TERF2IP interactions	ARPP21 PPP2R5E WDHD1 RNF20 ZNF638 CCAR1 DDX23 KMT2A SRSF11 RNF40 SREK1 PRPF40A TASOR2 DNMT1	4.40e-09	552	69	14	int:TERF2IP
Interaction	SRSF4 interactions	SRRM1 RNPS1 ARGLU1 ZNF638 DDX23 KMT2A SRSF11 SREK1 HUWE1 LARP1B SMC5	5.61e-09	300	69	11	int:SRSF4
Interaction	SNRPA1 interactions	SNRNP27 SRRM1 RNPS1 ARGLU1 SF3A1 CHD4 UPF3B SREK1 HUWE1 SMC5 PRPF40A	5.61e-09	300	69	11	int:SNRPA1
Interaction	OBSL1 interactions	SRRM1 PBRM1 POLR1A TFB1M LUC7L3 RNPS1 SF3A1 ZNF638 EIF5B DDX23 MCM3 SRSF11 CHD4 HUWE1 PRPF40A TASOR2 HDAC2	6.64e-09	902	69	17	int:OBSL1
Interaction	MEN1 interactions	SRRM1 PBRM1 WDHD1 LUC7L3 RNPS1 SF3A1 FRG1 RNF20 ZNF638 EIF5B DDX23 KMT2A CHD4 XPC SREK1 RERE PRPF40A HDAC2	6.97e-09	1029	69	18	int:MEN1
Interaction	RBM25 interactions	SRRM1 RNPS1 SF3A1 PPP1R12A DDX23 SRSF11 CHD4 UPF3B SREK1 SMC5 PRPF40A	1.21e-08	323	69	11	int:RBM25
Interaction	HERC2 interactions	SNRNP27 SRRM1 LUC7L3 RNPS1 ARGLU1 EIF5B PSMC2 MAP7D2 MCM3 SRSF11 SREK1 PRPF40A HDAC2	1.35e-08	503	69	13	int:HERC2
Interaction	MYCN interactions	SNRNP27 SRRM1 POLR1A ATXN2 RNPS1 ARGLU1 SF3A1 FRG1 ZNF638 EIF5B DDX23 KMT2A MCM3 SRSF11 CHD4 UPF3B HUWE1 PRPF40A DNMT1 HDAC2	1.86e-08	1373	69	20	int:MYCN
Interaction	UBR5 interactions	SNRNP27 SRRM1 LUC7L3 RNPS1 ARGLU1 EIF5B PSMC2 COP1 DDX23 SREK1 HUWE1 CSPP1 PRPF40A	2.67e-08	533	69	13	int:UBR5
Interaction	SUZ12 interactions	TAF3 PBRM1 WDHD1 LUC7L3 RNPS1 SF3A1 ZNF638 DDX23 CHD4 UPF3B SMC5 TASOR2 DNMT1 HDAC2	3.07e-08	644	69	14	int:SUZ12
Interaction	PRPF40A interactions	SNRNP27 SRRM1 RNPS1 SF3A1 PPP1R12A DDX23 SRSF11 ZFHX3 CHD4 SREK1 SMC5 PRPF40A	3.35e-08	446	69	12	int:PRPF40A
Interaction	CAND1 interactions	SRRM1 TFB1M LUC7L3 ATXN2 RNPS1 SF3A1 FRG1 RNF20 ZNF638 EIF5B CCAR1 COP1 SRSF11 RNF40 UPF3B HUWE1	4.13e-08	894	69	16	int:CAND1
Interaction	CEBPB interactions	SRRM1 PBRM1 WDHD1 LUC7L3 RNPS1 SF3A1 ZNF638 EIF5B PSMC2 CCAR1 PDAP1 COP1 DDX23 MCM3 SRSF11 CHD4 XPC PRPF40A DNMT1 HDAC2	4.27e-08	1443	69	20	int:CEBPB
Interaction	EFTUD2 interactions	SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 RNF20 ZNF638 EIF5B PDAP1 DDX23 MCM3 RNF40 CHD4 UPF3B SREK1 HUWE1 RRM1 SMC5 DNMT1 HDAC2	4.57e-08	1449	69	20	int:EFTUD2
Interaction	SRSF1 interactions	SRRM1 LUC7L3 RNPS1 ARGLU1 SF3A1 SRSF11 CHD4 UPF3B SREK1 HUWE1 LARP1B SMC5 PRPF40A	5.86e-08	570	69	13	int:SRSF1
Interaction	NCL interactions	SRRM1 ATXN2 DNAJC25 PPP1R12A SCN9A EIF5B PSMC2 DDX23 KMT2A CHD4 SREK1 HUWE1 SMC5 TASOR2 HDAC2	6.24e-08	798	69	15	int:NCL
Interaction	SRSF9 interactions	RNPS1 SF3A1 MCM3 SRSF11 RNF40 CHD4 SREK1 SMC5 HDAC2	7.01e-08	224	69	9	int:SRSF9
Interaction	PNN interactions	SRRM1 RNPS1 ARGLU1 SF3A1 DDX23 SRSF11 CHD4 SREK1 SMC5 PRPF40A	7.67e-08	302	69	10	int:PNN
Interaction	SUMO2 interactions	PTMS PBRM1 WDHD1 SF3A1 RNF20 ZNF638 MCM3 CHD4 HUWE1 RRM1 SMC5 DNMT1 HDAC2	8.92e-08	591	69	13	int:SUMO2
Interaction	WBP4 interactions	SNRNP27 ARGLU1 SF3A1 EIF5B DDX23 SMC5 PRPF40A	9.12e-08	109	69	7	int:WBP4
Interaction	FUBP1 interactions	SRRM1 LUC7L3 ATXN2 RNPS1 ZNF638 DDX23 UPF3B SMC5 PRPF40A HDAC2	9.49e-08	309	69	10	int:FUBP1
Interaction	CSNK2A1 interactions	SRRM1 LIG1 POLR1A ATXN2 RNPS1 SF3A1 EIF5B PDAP1 KMT2A MCM3 SRSF11 CHD4 UPF3B SREK1 PRPF40A HDAC2	1.04e-07	956	69	16	int:CSNK2A1
Interaction	IFI16 interactions	SNRNP27 SRRM1 PBRM1 SF3A1 ZNF638 PDAP1 DDX23 SRSF11 RNF40 CHD4 UPF3B HUWE1 PRPF40A DNMT1	1.10e-07	714	69	14	int:IFI16
Interaction	SRSF6 interactions	SRRM1 TFB1M RNPS1 ZNF638 DDX23 KMT2A SRSF11 CHD4 SREK1 HUWE1 LARP1B SMC5	1.24e-07	503	69	12	int:SRSF6
Interaction	HDLBP interactions	SNRNP27 SRRM1 TAF3 LUC7L3 RNPS1 SF3A1 DDX23 KMT2A SRSF11 CHD4 XPC UPF3B SMC5 PRPF40A DNMT1	1.53e-07	855	69	15	int:HDLBP
Interaction	AR interactions	PBRM1 LUC7L3 RNPS1 RNF20 PSMC2 CCAR1 DDX23 KMT2A MCM3 ZFHX3 RNF40 CHD4 RERE HUWE1 PRPF40A HDAC2	1.72e-07	992	69	16	int:AR
Interaction	PPP4R3A interactions	SNRNP27 WDHD1 SF3A1 ITSN2 DDX23 CHD4 HUWE1 PRPF40A	1.74e-07	179	69	8	int:PPP4R3A
Interaction	CHERP interactions	SNRNP27 RNPS1 ARGLU1 SF3A1 CCAR1 DDX23 CHD4 SMC5 PRPF40A	2.65e-07	262	69	9	int:CHERP
Interaction	U2AF2 interactions	SRRM1 LIG1 RNPS1 SF3A1 PSMC2 CCAR1 PDAP1 DDX23 SRSF11 CHD4 HUWE1 SMC5 PRPF40A	2.71e-07	651	69	13	int:U2AF2
Interaction	SNRPC interactions	SRRM1 LUC7L3 RNPS1 ARGLU1 SF3A1 ZNF638 DDX23 SREK1 RERE SMC5 PRPF40A	2.77e-07	440	69	11	int:SNRPC
Interaction	PARP1 interactions	SNRNP27 SRRM1 LIG1 TAF3 PBRM1 POLR1A WDHD1 SF3A1 MCM3 CHD4 XPC SREK1 HUWE1 RRM1 SMC5 PRPF40A DNMT1 HDAC2	2.93e-07	1316	69	18	int:PARP1
Interaction	THRAP3 interactions	RNPS1 SF3A1 DDX23 LMOD1 SRSF11 RNF40 CHD4 UPF3B SREK1 SMC5 TASOR2	2.96e-07	443	69	11	int:THRAP3
Interaction	PRPF8 interactions	SRRM1 LUC7L3 RNPS1 SF3A1 FRG1 RNF20 EIF5B DDX23 RNF40 CHD4 HUWE1 SMC5 PRPF40A SPINK5	3.03e-07	776	69	14	int:PRPF8
Interaction	LUC7L2 interactions	SNRNP27 LUC7L3 RNPS1 SF3A1 COP1 SRSF11 CHD4 SREK1 HUWE1 LARP1B	3.25e-07	353	69	10	int:LUC7L2
Interaction	SNRNP200 interactions	SRRM1 WDHD1 RNPS1 SF3A1 FRG1 PSMC2 DDX23 RNF40 CHD4 HUWE1 SMC5	4.31e-07	460	69	11	int:SNRNP200
Interaction	RBMX interactions	SRRM1 LIG1 RNPS1 SF3A1 ITSN2 COP1 DDX23 MCM3 CHD4 SREK1 SMC5	4.40e-07	461	69	11	int:RBMX
Interaction	SRRM2 interactions	SRRM1 RNPS1 DNAJC25 SF3A1 COP1 DDX23 SRSF11 CHD4 SMC5 PRPF40A HDAC2	4.49e-07	462	69	11	int:SRRM2
Interaction	SRSF11 interactions	SRRM1 RNPS1 ARGLU1 DDX23 SRSF11 SREK1 SMC5 PRPF40A	4.56e-07	203	69	8	int:SRSF11
Interaction	DDX5 interactions	SNRNP27 SRRM1 ATXN2 SF3A1 FRG1 DDX23 MCM3 RNF40 CHD4 SMC5 PRPF40A HDAC2	4.56e-07	568	69	12	int:DDX5
Interaction	DOT1L interactions	SRRM1 PBRM1 POLR1A LUC7L3 RNPS1 SF3A1 PPP1R12A ZNF638 CCAR1 KMT2A SRSF11 CHD4 XPC PRPF40A	4.86e-07	807	69	14	int:DOT1L
Interaction	PUF60 interactions	SRRM1 RNPS1 ARGLU1 SF3A1 DDX23 SRSF11 CHD4 SREK1 SMC5 PRPF40A	4.88e-07	369	69	10	int:PUF60
Interaction	CWC22 interactions	SNRNP27 FRG1 PDAP1 DDX23 CHD4 SMC5 PRPF40A	5.31e-07	141	69	7	int:CWC22
Interaction	TOP1 interactions	SRRM1 LIG1 PBRM1 RNPS1 ZNF638 CCAR1 DDX23 KMT2A MCM3 SRSF11 CHD4 SMC5 PRPF40A	5.78e-07	696	69	13	int:TOP1
Interaction	ENO1 interactions	PPP2R5E POLR1A LUC7L3 SF3A1 PPP1R12A ZNF638 EIF5B CHD4 HUWE1 RRM1 SMC5 DNMT1 HDAC2	6.27e-07	701	69	13	int:ENO1
Interaction	PAF1 interactions	SRRM1 RNF20 DDX23 KMT2A RNF40 CHD4 SMC5 TULP2	6.80e-07	214	69	8	int:PAF1
Interaction	SNRPA interactions	SRRM1 LUC7L3 RNPS1 SF3A1 ZNF638 CCAR1 DDX23 SRSF11 HUWE1 SMC5 PRPF40A	6.82e-07	482	69	11	int:SNRPA
Interaction	DDRGK1 interactions	SRRM1 POLR1A TFB1M LUC7L3 RNPS1 DNAJC25 SF3A1 FRG1 EIF5B PSMC2 DDX23 MCM3 SRSF11 UPF3B LARP1B PRPF40A DNMT1	7.25e-07	1249	69	17	int:DDRGK1
Interaction	EP300 interactions	PTMS WDHD1 TFB1M RNPS1 SF3A1 FRG1 RWDD1 PSMC2 DDX23 MCM3 SRSF11 RNF40 CHD4 RERE RRM1 PRPF40A DNMT1 HDAC2	7.34e-07	1401	69	18	int:EP300
Interaction	ACIN1 interactions	SRRM1 RNPS1 ARGLU1 SF3A1 DDX23 SRSF11 CHD4 SMC5 PRPF40A	8.48e-07	301	69	9	int:ACIN1
Interaction	BRD3 interactions	SRRM1 TAF3 PBRM1 RNPS1 ARGLU1 EIF5B KMT2A CHD4 SREK1 PRPF40A DNMT1	8.69e-07	494	69	11	int:BRD3
Interaction	SFSWAP interactions	RNPS1 PSMC2 CCAR1 DDX23 CHD4 SMC5	9.39e-07	96	69	6	int:SFSWAP
Interaction	CDC5L interactions	SNRNP27 SRRM1 ARGLU1 SF3A1 FRG1 ZNF638 PSMC2 DDX23 MCM3 CHD4 SREK1 HUWE1 SMC5 PRPF40A	9.68e-07	855	69	14	int:CDC5L
Interaction	NCBP3 interactions	RNPS1 ARGLU1 SF3A1 SRSF11 CHD4 SMC5 PRPF40A	1.05e-06	156	69	7	int:NCBP3
Interaction	SMU1 interactions	SNRNP27 LUC7L3 RNPS1 SF3A1 SRSF11 RNF40 HUWE1 PRPF40A	1.06e-06	227	69	8	int:SMU1
Interaction	RBBP7 interactions	PTMS LUC7L3 ARID4A ARGLU1 KMT2A CHD4 HUWE1 SMC5 PRPF40A DNMT1 HDAC2	1.12e-06	507	69	11	int:RBBP7
Interaction	KAT6A interactions	TAF3 PBRM1 POLR1A LUC7L3 RNPS1 COP1 KMT2A CHD4 UPF3B SREK1 RERE	1.19e-06	510	69	11	int:KAT6A
Interaction	SNW1 interactions	SRRM1 LUC7L3 SF3A1 ZNF638 PSMC2 DDX23 KMT2A SRSF11 CHD4 HUWE1 SMC5 PRPF40A HDAC2	1.28e-06	747	69	13	int:SNW1
Interaction	SIRT6 interactions	PBRM1 POLR1A WDHD1 RNF20 MAP7D2 MCM3 RNF40 CHD4 XPC HUWE1 TASOR2 HDAC2	1.31e-06	628	69	12	int:SIRT6
Interaction	CHD3 interactions	SRRM1 PBRM1 LUC7L3 SF3A1 CCAR1 DDX23 KMT2A MCM3 ZFHX3 CHD4 SMC5 PRPF40A HDAC2	1.48e-06	757	69	13	int:CHD3
Interaction	KIF23 interactions	SRRM1 LUC7L3 RNPS1 ARGLU1 PPP1R12A EIF5B CCAR1 DDX23 MCM3 AK9 CHD4 HUWE1 LARP1B SMC5 PRPF40A	1.64e-06	1031	69	15	int:KIF23
Interaction	BCLAF1 interactions	SRRM1 ARGLU1 DNAJC25 SF3A1 DDX23 SRSF11 RNF40 CHD4 SMC5	1.68e-06	327	69	9	int:BCLAF1
Interaction	CBX3 interactions	PTMS SRRM1 LIG1 PPP1R12A EIF5B KMT2A CHD4 XPC RRM1 SMC5 DNMT1 HDAC2	1.76e-06	646	69	12	int:CBX3
Interaction	ZC3H14 interactions	SRRM1 RNPS1 ARGLU1 SF3A1 SRSF11 SMC5 HDAC2	1.79e-06	169	69	7	int:ZC3H14
Interaction	NPM1 interactions	TAF3 PBRM1 DNAJC25 PPP1R12A ZNF638 PDAP1 DDX23 KMT2A LMOD1 SRSF11 CHD4 XPC SREK1 HUWE1 SMC5 HDAC2	2.18e-06	1201	69	16	int:NPM1
Interaction	RPLP0 interactions	SRRM1 PBRM1 ATXN2 DNAJC25 EIF5B PSMC2 KMT2A CHD4 HUWE1 LARP1B SMC5 PRPF40A	2.20e-06	660	69	12	int:RPLP0
Interaction	H1-2 interactions	SRRM1 LIG1 RNF20 PDAP1 COP1 KMT2A LMOD1 CHD4 SREK1 RRM1 SMC5 PRPF40A	2.41e-06	666	69	12	int:H1-2
Interaction	SUPT16H interactions	SRRM1 POLR1A SF3A1 RNF20 DDX23 MCM3 CHD4 XPC SREK1 SMC5	2.49e-06	442	69	10	int:SUPT16H
Interaction	H2BC1 interactions	SRRM1 EIF5B CHD4 XPC RRM1 SMC5 HDAC2	2.53e-06	178	69	7	int:H2BC1
Interaction	ZBTB2 interactions	SNRNP27 LIG1 PBRM1 LUC7L3 RNPS1 SF3A1 PPP1R12A CHD4 PRPF40A HDAC2	2.92e-06	450	69	10	int:ZBTB2
Interaction	PRPF19 interactions	SRRM1 RNPS1 SF3A1 FRG1 RNF20 SRSF11 RNF40 CHD4 HUWE1 SMC5	2.92e-06	450	69	10	int:PRPF19
Interaction	SMARCC2 interactions	SRRM1 PBRM1 SF3A1 PPP1R12A KMT2A CHD4 SMC5 PRPF40A HDAC2	3.15e-06	353	69	9	int:SMARCC2
Interaction	CEBPA interactions	LIG1 ATXN2 RNPS1 SF3A1 FRG1 EIF5B CCAR1 PDAP1 COP1 DDX23 KMT2A CHD4 UPF3B RRM1 DNMT1 HDAC2	3.47e-06	1245	69	16	int:CEBPA
Interaction	RNF113A interactions	SRRM1 LUC7L3 RNPS1 ARGLU1 EIF5B CCAR1 DDX23 SRSF11 CHD4 SREK1 RERE PRPF40A	3.58e-06	692	69	12	int:RNF113A
Interaction	H2BC21 interactions	PBRM1 ARID4A RNF20 ZNF638 KMT2A MCM3 RNF40 CHD4 XPC HUWE1 CFAP46 HDAC2	3.80e-06	696	69	12	int:H2BC21
Interaction	DDB1 interactions	LIG1 LUC7L3 ARGLU1 CCAR1 COP1 DDX23 RNF40 XPC HUWE1 DNMT1 INVS HDAC2	3.86e-06	697	69	12	int:DDB1
Interaction	SMARCB1 interactions	PBRM1 WDHD1 SF3A1 PPP1R12A KMT2A CHD4 XPC TASOR2 HDAC2	4.04e-06	364	69	9	int:SMARCB1
Interaction	SF3A1 interactions	SNRNP27 SRRM1 RNPS1 SF3A1 CCAR1 DDX23 CHD4 HUWE1 SMC5 PRPF40A	4.38e-06	471	69	10	int:SF3A1
Interaction	PRC1 interactions	SRRM1 PBRM1 LUC7L3 RNPS1 ARGLU1 SF3A1 PPP1R12A ZNF638 EIF5B DDX23 CHD4 KIF13A PRPF40A HDAC2	4.39e-06	973	69	14	int:PRC1
Interaction	CLK2 interactions	SNRNP27 SRRM1 LUC7L3 RNPS1 ZNF638 SRSF11 HUWE1	4.63e-06	195	69	7	int:CLK2
Interaction	NAA40 interactions	RNPS1 SF3A1 PPP1R12A ZNF638 EIF5B PSMC2 PDAP1 KMT2A CHD4 XPC UPF3B SMC5 PRPF40A DNMT1	4.66e-06	978	69	14	int:NAA40
Cytoband	10p15.1	TAF3 TASOR2	8.21e-04	28	69	2	10p15.1
Cytoband	Ensembl 112 genes in cytogenetic band chr9q31	DNAJC25 RNF20 INVS	1.18e-03	137	69	3	chr9q31
Cytoband	14q23.1	PPP2R5E ARID4A	2.30e-03	47	69	2	14q23.1
GeneFamily	PHD finger proteins	TAF3 KMT2A CHD4 KDM7A	6.11e-05	90	43	4	88
GeneFamily	Zinc fingers CXXC-type	KMT2A DNMT1	3.59e-04	12	43	2	136
GeneFamily	PHD finger proteins\|NuRD complex	CHD4 HDAC2	3.59e-04	12	43	2	1305
GeneFamily	RNA binding motif containing	RNPS1 ZNF638 SRSF11 SREK1	1.61e-03	213	43	4	725
GeneFamily	Ankyrin repeat domain containing	ESPN PPP1R12A ANKRD12 INVS	2.57e-03	242	43	4	403
Coexpression	LAKE_ADULT_KIDNEY_C5_PROXIMAL_TUBULE_EPITHELIAL_CELLS_STRESS_INFLAM	PTMS PPP2R5E LUC7L3 ARID4A EIF5B CCAR1 SRSF11 AK9 XPC UPF3B SREK1 CSPP1 ZMAT1 CFAP46	3.74e-12	417	69	14	M39224
Coexpression	HAMAI_APOPTOSIS_VIA_TRAIL_UP	PBRM1 WDHD1 LUC7L3 ITSN2 RWDD1 RNF20 ZNF638 EIF5B CCAR1 SRSF11 SREK1 CSPP1 TASOR2 HDAC2	1.43e-09	656	69	14	M18979
Coexpression	GSE21380_NON_TFH_VS_GERMINAL_CENTER_TFH_CD4_TCELL_DN	ARID4A PPP1R12A RNF20 EIF5B DDX23 SRSF11 TASOR2	9.80e-07	200	69	7	M7505
Coexpression	MILI_PSEUDOPODIA_HAPTOTAXIS_UP	PBRM1 FRG1 PPP1R12A RWDD1 EIF5B COP1 SRSF11 SMC5 PRPF40A HDAC2	1.09e-06	523	69	10	M12707
Coexpression	MILI_PSEUDOPODIA_HAPTOTAXIS_UP	PBRM1 FRG1 PPP1R12A RWDD1 EIF5B COP1 SRSF11 SMC5 PRPF40A HDAC2	1.31e-06	534	69	10	MM1054
Coexpression	PUJANA_BRCA2_PCC_NETWORK	LIG1 WDHD1 FRG1 DDX23 MCM3 SRSF11 RRM1 SMC5 DNMT1	1.74e-06	426	69	9	M9516
Coexpression	FEVR_CTNNB1_TARGETS_DN	SRRM1 LIG1 PPP2R5E ARGLU1 MCM3 ZFHX3 RRM1 DNMT1 INVS HDAC2	1.85e-06	555	69	10	M2343
Coexpression	PUJANA_CHEK2_PCC_NETWORK	LIG1 PPP2R5E WDHD1 FRG1 EIF5B PSMC2 MCM3 SRSF11 RRM1 DNMT1 HDAC2	4.53e-06	761	69	11	M11961
Coexpression	KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	SNRNP27 SRRM1 LIG1 PBRM1 PPP2R5E WDHD1 SF3A1 EIF5B MAP7D2 MCM3 LARP1B RRM1 PRPF40A DNMT1	5.55e-06	1290	69	14	M80
Coexpression	RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_DN	LUC7L3 MCM3 CSPP1	9.54e-06	16	69	3	M17006
Coexpression	ERWIN_COHEN_BLOOD_LIVE_VACCINE_TC_83_AGE_23_48YO_VACCINATED_VS_CONTROL_14DY_UP	LUC7L3 ARGLU1 RWDD1 PSMC2 CCAR1 SRSF11 SREK1 RRM1 PRPF40A TASOR2	1.21e-05	687	69	10	M41022
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_INFAB_CD8_TCELL_DN	LIG1 POLR1A LUC7L3 PDAP1 RRM1 DNMT1	1.43e-05	199	69	6	M3594
Coexpression	MCBRYAN_PUBERTAL_BREAST_5_6WK_DN	ITSN2 PDAP1 ZFHX3 CHD4 SREK1	2.70e-05	133	69	5	M8880
Coexpression	MCBRYAN_PUBERTAL_BREAST_5_6WK_DN	ITSN2 PDAP1 ZFHX3 CHD4 SREK1	3.11e-05	137	69	5	MM990
Coexpression	ENK_UV_RESPONSE_KERATINOCYTE_DN	PPP2R5E LUC7L3 ATXN2 ITSN2 ZNF638 SRSF11 RRM1 DNMT1	3.81e-05	481	69	8	M3898
Coexpression	AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_DN	SRRM1 SF3A1 PPP1R12A DDX23 XPC HDAC2	3.82e-05	237	69	6	M8897
Coexpression	ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_AGE_20_50YO_CORRELATED_WITH_CD8_T_CELL_RESPONSE_3DY_POSITIVE	SNRNP27 ARID4A COP1 ANKRD12	7.24e-05	84	69	4	M40895
Coexpression	GSE6269_FLU_VS_STREP_PNEUMO_INF_PBMC_UP	WDHD1 EIF5B KMT2A CHD4 PRPF40A	8.69e-05	170	69	5	M5657
Coexpression	MENON_FETAL_KIDNEY_0_CAP_MESENCHYME_CELLS	PTMS LUC7L3 CHD4 DNMT1	9.47e-05	90	69	4	M39250
Coexpression	FOURNIER_ACINAR_DEVELOPMENT_LATE_2	SRRM1 TFB1M EIF5B MCM3 SRSF11 PRPF40A	9.80e-05	281	69	6	M4077
Coexpression	MORI_IMMATURE_B_LYMPHOCYTE_DN	LIG1 MCM3 RRM1 DNMT1	9.89e-05	91	69	4	M18917
Coexpression	MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP	POLR1A LUC7L3 ARGLU1 CCAR1 PDAP1 CHD4 SREK1	9.89e-05	408	69	7	M11891
Coexpression	MORI_IMMATURE_B_LYMPHOCYTE_DN	LIG1 MCM3 RRM1 DNMT1	1.08e-04	93	69	4	MM1138
Coexpression	MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP	POLR1A LUC7L3 ARGLU1 CCAR1 PDAP1 CHD4 SREK1	1.10e-04	415	69	7	MM1028
Coexpression	GSE14415_NATURAL_TREG_VS_TCONV_DN	PTMS LIG1 WDHD1 MCM3 RRM1	1.14e-04	180	69	5	M2961
Coexpression	GABRIELY_MIR21_TARGETS	PBRM1 ARID4A ITSN2 SRSF11 SREK1 SMC5	1.14e-04	289	69	6	M2196
Coexpression	TABULA_MURIS_SENIS_LIVER_ENDOTHELIAL_CELL_OF_HEPATIC_SINUSOID_AGEING	SNRNP27 PBRM1 ARID4A FRG1 PDAP1 CHD4 XPC	1.15e-04	418	69	7	MM3752
Coexpression	GSE13547_CTRL_VS_ANTI_IGM_STIM_BCELL_2H_UP	LIG1 WDHD1 SF3A1 MCM3 RRM1	1.23e-04	183	69	5	M2993
Coexpression	GSE13547_CTRL_VS_ANTI_IGM_STIM_BCELL_12H_UP	LIG1 WDHD1 MCM3 RRM1 CSPP1	1.36e-04	187	69	5	M2984
Coexpression	PYEON_HPV_POSITIVE_TUMORS_UP	LIG1 MAP7D2 MCM3 ZMAT1	1.48e-04	101	69	4	M7738
Coexpression	GSE21670_UNTREATED_VS_TGFB_IL6_TREATED_CD4_TCELL_UP	WDHD1 LUC7L3 KMT2A CSPP1 TASOR2	1.61e-04	194	69	5	M7467
Coexpression	HOUNKPE_HOUSEKEEPING_GENES	SRRM1 PPP2R5E LUC7L3 RNPS1 FRG1 RNF20 EIF5B PDAP1 DDX23 SRSF11 RERE	1.66e-04	1129	69	11	M42508
Coexpression	GSE8685_IL2_STARVED_VS_IL2_ACT_IL2_STARVED_CD4_TCELL_DN	SRRM1 POLR1A LUC7L3 RRM1 DNMT1	1.78e-04	198	69	5	M325
Coexpression	GSE3982_EOSINOPHIL_VS_BCELL_DN	MCM3 KDM7A RERE RRM1 DNMT1	1.78e-04	198	69	5	M5411
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_CD8_TCELL_DN	LIG1 POLR1A LUC7L3 PDAP1 RRM1	1.82e-04	199	69	5	M3588
Coexpression	GSE360_L_DONOVANI_VS_B_MALAYI_LOW_DOSE_MAC_DN	ATXN2 SCN9A ZFHX3 CHD4 RERE	1.82e-04	199	69	5	M5240
Coexpression	GSE3982_NEUTROPHIL_VS_NKCELL_DN	PTMS SNRNP27 C17orf75 CDKL3 RRM1	1.82e-04	199	69	5	M5531
Coexpression	GSE32423_MEMORY_VS_NAIVE_CD8_TCELL_DN	SRRM1 ARID4A PPP1R12A SMC5 KIF13A	1.86e-04	200	69	5	M5073
Coexpression	GSE9650_NAIVE_VS_EFF_CD8_TCELL_UP	ZNF638 KMT2A XPC RERE HDAC2	1.86e-04	200	69	5	M5819
Coexpression	GSE12003_MIR223_KO_VS_WT_BM_PROGENITOR_4D_CULTURE_UP	ZNF638 KMT2A SMC5 CSPP1 TASOR2	1.86e-04	200	69	5	M387
Coexpression	GSE13306_RA_VS_UNTREATED_TREG_UP	LIG1 WDHD1 CHD4 HUWE1 KIF13A	1.86e-04	200	69	5	M3232
Coexpression	GSE27786_BCELL_VS_NEUTROPHIL_UP	TFB1M LUC7L3 SF3A1 CCAR1 SRSF11	1.86e-04	200	69	5	M4813
Coexpression	GSE360_L_DONOVANI_VS_L_MAJOR_DC_UP	FRG1 PSMC2 KMT2A PRPF40A SPINK5	1.86e-04	200	69	5	M5192
Coexpression	GSE3982_MAST_CELL_VS_TH2_DN	PTMS LIG1 MCM3 SRSF11 INVS	1.86e-04	200	69	5	M5456
Coexpression	GSE21546_WT_VS_SAP1A_KO_ANTI_CD3_STIM_DP_THYMOCYTES_DN	ARPP21 ZNF638 CCAR1 ANKRD12 PTGDR	1.86e-04	200	69	5	M7532
Coexpression	TABULA_MURIS_SENIS_SPLEEN_PROERYTHROBLAST_AGEING	SNRNP27 SRRM1 LUC7L3 FRG1 RWDD1 EIF5B PSMC2 PDAP1 SRSF11 CHD4 PRPF40A	1.86e-04	1144	69	11	MM3843
Coexpression	TABULA_MURIS_SENIS_MARROW_ERYTHROBLAST_AGEING	SRRM1 PBRM1 LUC7L3 EIF5B SRSF11	1.99e-04	203	69	5	MM3795
Coexpression	CAIRO_HEPATOBLASTOMA_CLASSES_UP	LIG1 SF3A1 EIF5B MCM3 HUWE1 RRM1 DNMT1 HDAC2	2.02e-04	612	69	8	M4772
Coexpression	HOUNKPE_HOUSEKEEPING_GENES	SRRM1 PPP2R5E LUC7L3 RNPS1 FRG1 RNF20 EIF5B PDAP1 DDX23 SRSF11 RERE	2.07e-04	1158	69	11	MM1338
Coexpression	MENON_FETAL_KIDNEY_4_PODOCYTES	PTMS LUC7L3 KMT2A CHD4 ANKRD12	2.13e-04	206	69	5	M39254
Coexpression	STARK_PREFRONTAL_CORTEX_22Q11_DELETION_UP	SRRM1 PPP2R5E ARGLU1 SRSF11 CHD4	2.13e-04	206	69	5	M2817
Coexpression	STARK_PREFRONTAL_CORTEX_22Q11_DELETION_UP	SRRM1 PPP2R5E ARGLU1 SRSF11 CHD4	2.23e-04	208	69	5	MM581
Coexpression	PUJANA_ATM_PCC_NETWORK	SNRNP27 SRRM1 PPP2R5E FRG1 EIF5B PDAP1 SRSF11 XPC RRM1 SMC5 PRPF40A DNMT1	2.57e-04	1394	69	12	M9585
Coexpression	DIAZ_CHRONIC_MYELOGENOUS_LEUKEMIA_UP	SRRM1 PPP2R5E LUC7L3 SF3A1 FRG1 PPP1R12A PDAP1 DDX23 MCM3 XPC UPF3B HDAC2	2.66e-04	1399	69	12	M535
Coexpression	LAKE_ADULT_KIDNEY_C3_PROXIMAL_TUBULE_EPITHELIAL_CELLS_S1_S2	LUC7L3 SRSF11 SREK1 RERE CSPP1	2.95e-04	221	69	5	M39222
Coexpression	THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_DN	ARID4A PPP1R12A DDX23 XPC RERE	3.34e-04	227	69	5	M11234
Coexpression	LUI_THYROID_CANCER_CLUSTER_1	ITSN2 SRSF11 CHD4	3.52e-04	52	69	3	M2135
Coexpression	BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP	MCM3 UPF3B RRM1	3.72e-04	53	69	3	M4448
Coexpression	WU_APOPTOSIS_BY_CDKN1A_VIA_TP53	WDHD1 MCM3 RRM1	3.72e-04	53	69	3	M10169
Coexpression	ISHIDA_E2F_TARGETS	LIG1 MCM3 RRM1	3.72e-04	53	69	3	M1945
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	PPP2R5E WDHD1 ARID4A ATXN2 PPP1R12A ITSN2 ZNF638 ZFHX3 SMC5	3.97e-04	856	69	9	M4500
Coexpression	ISHIDA_E2F_TARGETS	LIG1 MCM3 RRM1	4.15e-04	55	69	3	MM1264
Coexpression	SONG_TARGETS_OF_IE86_CMV_PROTEIN	DDX23 MCM3 RRM1	4.15e-04	55	69	3	M2257
Coexpression	MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	ATXN2 RNF20 EIF5B CCAR1 COP1 SREK1 PRPF40A	4.28e-04	519	69	7	M3395
Coexpression	HAY_BONE_MARROW_ERYTHROBLAST	ESPN WDHD1 EIF5B PSMC2 PDAP1 MCM3 RNF40 RRM1 PRPF40A DNMT1 HDAC2	4.58e-04	1271	69	11	M39197
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	PPP2R5E ARID4A SF3A1 PPP1R12A ITSN2 ZNF638 KMT2A HUWE1 SMC5 PTGDR PRPF40A DNMT1	4.76e-04	1492	69	12	M40023
Coexpression	WANG_TUMOR_INVASIVENESS_UP	ESPN TAF3 EIF5B PSMC2 SMC5 ZMAT1	5.24e-04	384	69	6	M1865
Coexpression	TABULA_MURIS_SENIS_GONADAL_ADIPOSE_TISSUE_ENDOTHELIAL_CELL_AGEING	PTMS SNRNP27 LUC7L3 RNPS1 FRG1 PSMC2 SRSF11 ANKRD12 SREK1 LARP1B	5.35e-04	1088	69	10	MM3699
Coexpression	MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	ATXN2 RNF20 EIF5B CCAR1 COP1 SREK1 PRPF40A	5.60e-04	543	69	7	MM997
Coexpression	LEE_BMP2_TARGETS_DN	POLR1A WDHD1 RNPS1 MAP7D2 MCM3 RRM1 PRPF40A DNMT1 HDAC2	5.89e-04	904	69	9	M2325
Coexpression	TABULA_MURIS_SENIS_KIDNEY_KIDNEY_COLLECTING_DUCT_PRINCIPAL_CELL_AGEING	SRRM1 ARGLU1 RWDD1 EIF5B PDAP1 ZFHX3	5.99e-04	394	69	6	MM3724
Coexpression	KAUFFMANN_DNA_REPLICATION_GENES	PTMS LIG1 MCM3 RRM1	6.03e-04	146	69	4	M9372
Coexpression	BERENJENO_TRANSFORMED_BY_RHOA_UP	LIG1 WDHD1 RNPS1 PSMC2 MCM3 RRM1 DNMT1	6.04e-04	550	69	7	M16189
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_AND_CANCER_BOX1_UP	CHD4 PRPF40A	6.09e-04	14	69	2	M1353
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_AND_CANCER_BOX1_UP	CHD4 PRPF40A	6.09e-04	14	69	2	MM565
Coexpression	TABULA_MURIS_SENIS_SKIN_BULGE_KERATINOCYTE_AGEING	PTMS SNRNP27 SRRM1 ARGLU1 FRG1 RWDD1 EIF5B PDAP1 CHD4	6.42e-04	915	69	9	MM3828
Coexpression	WANG_TUMOR_INVASIVENESS_UP	ESPN TAF3 EIF5B PSMC2 SMC5 ZMAT1	6.66e-04	402	69	6	MM1248
Coexpression	LEE_BMP2_TARGETS_DN	POLR1A WDHD1 RNPS1 MAP7D2 MCM3 RRM1 PRPF40A DNMT1 HDAC2	6.78e-04	922	69	9	MM1068
Coexpression	HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP	LIG1 WDHD1 RRM1 DNMT1	7.19e-04	153	69	4	M5588
Coexpression	GSE37605_NOD_VS_C57BL6_IRES_GFP_TREG_DN	RNF20 RERE TNNT3 DNMT1	7.19e-04	153	69	4	M8815
Coexpression	BERENJENO_TRANSFORMED_BY_RHOA_UP	LIG1 WDHD1 RNPS1 PSMC2 MCM3 RRM1 DNMT1	7.53e-04	571	69	7	MM1100
Coexpression	HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP	LIG1 WDHD1 RRM1 DNMT1	7.54e-04	155	69	4	MM1259
Coexpression	HESS_TARGETS_OF_HOXA9_AND_MEIS1_UP	MCM3 RRM1 HDAC2	8.08e-04	69	69	3	M1319
Coexpression	HESS_TARGETS_OF_HOXA9_AND_MEIS1_UP	MCM3 RRM1 HDAC2	8.08e-04	69	69	3	MM1158
Coexpression	TABULA_MURIS_SENIS_SPLEEN_MEGAKARYOCYTE_ERYTHROID_PROGENITOR_CELL_AGEING	LIG1 MCM3 RRM1	9.52e-04	73	69	3	MM3841
Coexpression	GSE37532_VISCERAL_ADIPOSE_TISSUE_VS_LN_DERIVED_PPARG_KO_TCONV_CD4_TCELL_UP	LIG1 MCM3 RRM1 HDAC2	9.52e-04	165	69	4	M8949
Coexpression	SYED_ESTRADIOL_RESPONSE	PPP2R5E RNPS1	1.02e-03	18	69	2	M13262
Coexpression	PUJANA_XPRSS_INT_NETWORK	FRG1 SRSF11 RRM1 DNMT1	1.02e-03	168	69	4	M18811
Coexpression	SRC_UP.V1_DN	LIG1 POLR1A COP1 MCM3	1.06e-03	170	69	4	M2713
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5	SRRM1 LIG1 TAF3 LUC7L3 ARID4A ARGLU1 PPP1R12A RNF20 CCAR1 PDAP1 COP1 SRSF11 SMC5 CSPP1 PRPF40A	1.30e-09	629	69	15	Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3	SRRM1 LIG1 LUC7L3 ARID4A ARGLU1 DNAJC25 RNF20 EIF5B CCAR1 PDAP1 SRSF11 ZFHX3 CHD4 UPF3B SREK1 RRM1 SMC5 CSPP1 PRPF40A DNMT1	1.71e-09	1257	69	20	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000	SRRM1 PBRM1 PPP2R5E POLR1A LUC7L3 ATXN2 ARGLU1 ZNF638 EIF5B PDAP1 MCM3 SRSF11 CHD4 CSPP1 TULP2 HDAC2	4.67e-09	806	69	16	gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500	SRRM1 LIG1 LUC7L3 ARID4A ARGLU1 DNAJC25 RNF20 EIF5B CCAR1 PDAP1 SRSF11 ZFHX3 CHD4 UPF3B SREK1 RRM1 SMC5 CSPP1 PRPF40A DNMT1	2.16e-08	1459	69	20	facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2	SRRM1 LIG1 TAF3 WDHD1 TFB1M ARID4A PPP1R12A RWDD1 RNF20 COP1 SRSF11 ZFHX3 CSPP1	2.83e-08	564	69	13	Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500_K1	SNRNP27 LIG1 TFB1M LUC7L3 ARGLU1 DNAJC25 RWDD1 CDKL3 EIF5B CCAR1 PDAP1 ZFHX3 CHD4 UPF3B SREK1 SMC5 PRPF40A HDAC2	5.59e-08	1241	69	18	facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlas	FacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5	TAF3 LUC7L3 ARGLU1 ZNF638 CCAR1 PDAP1 MAP7D2 SRSF11	1.58e-07	186	69	8	Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_top-relative-expression-ranked_1000	SRRM1 PBRM1 PPP2R5E LUC7L3 ATXN2 ARGLU1 MCM3 SRSF11 ZFHX3 ANKRD12 HUWE1 CSPP1 TULP2 HDAC2	2.48e-07	804	69	14	gudmap_developingGonad_e12.5_ovary_1000
CoexpressionAtlas	facebase_RNAseq_e10.5_MaxArch_2500_K3	SRRM1 TAF3 LUC7L3 ARID4A ARGLU1 DNAJC25 ZNF638 EIF5B CCAR1 PDAP1 ZFHX3 CHD4 ANKRD12 UPF3B SREK1 SMC5 PRPF40A	3.62e-07	1252	69	17	facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500	SNRNP27 LIG1 TFB1M LUC7L3 ARGLU1 DNAJC25 RWDD1 CDKL3 EIF5B CCAR1 PDAP1 ZFHX3 CHD4 UPF3B SREK1 SMC5 PRPF40A HDAC2	6.80e-07	1468	69	18	facebase_RNAseq_e10.5_MandArch_2500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000_k-means-cluster#3	TAF3 LUC7L3 ARID4A ARGLU1 PPP1R12A CCAR1 PDAP1 SRSF11 SMC5 PRPF40A	1.28e-06	432	69	10	Facebase_RNAseq_e10.5_Maxillary Arch_1000_K3
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#1_top-relative-expression-ranked_1000	PPP2R5E POLR1A ZNF638 EIF5B PDAP1 MCM3 CHD4 TULP2	2.05e-06	261	69	8	gudmap_developingGonad_e12.5_epididymis_k1_1000
CoexpressionAtlas	DevelopingGonad_e14.5_ ovary_emap-6699_top-relative-expression-ranked_1000	PPP2R5E ARGLU1 MAP7D2 MCM3 SRSF11 ANKRD12 HUWE1 LARP1B CSPP1 TULP2 TASOR2 HDAC2	6.78e-06	776	69	12	gudmap_developingGonad_e14.5_ ovary_1000
CoexpressionAtlas	DevelopingGonad_e16.5_ovary_emap-9563_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 MAP7D2 SRSF11 ANKRD12 LARP1B CSPP1 ZMAT1 TULP2 HDAC2	8.65e-06	795	69	12	gudmap_developingGonad_e16.5_ovary_1000
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_top-relative-expression-ranked_1000	SRRM1 POLR1A LUC7L3 ATXN2 ARGLU1 PDAP1 MCM3 SRSF11 ZFHX3 ANKRD12 CSPP1 HDAC2	9.33e-06	801	69	12	gudmap_developingGonad_e14.5_ epididymis_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000	TAF3 ARPP21 LUC7L3 ARID4A ARGLU1 PPP1R12A CCAR1 PDAP1 SRSF11 ZFHX3 SMC5 CSPP1 PRPF40A	1.53e-05	989	69	13	Facebase_RNAseq_e10.5_Maxillary Arch_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4	SRRM1 LIG1 TAF3 LUC7L3 ARID4A PPP1R12A RNF20 MAP7D2 CHD4 CSPP1	2.13e-05	595	69	10	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3	LUC7L3 ARID4A CCAR1 PDAP1 MAP7D2 SMC5	3.78e-05	192	69	6	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlas	FacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3	ARGLU1 ZNF638 EIF5B PDAP1 MAP7D2 KDM7A SMC5 PRPF40A DNMT1	5.42e-05	532	69	9	Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlas	DevelopingGonad_e11.5_testes_emap-3226_top-relative-expression-ranked_1000	PTMS PPP2R5E ATXN2 PDAP1 MCM3 ZFHX3 SREK1 RRM1 CSPP1 PRPF40A TULP2	8.04e-05	843	69	11	gudmap_developingGonad_e11.5_testes_1000
CoexpressionAtlas	DevelopingGonad_e16.5_ovary_emap-9563_k-means-cluster#2_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 SRSF11 HDAC2	1.03e-04	230	69	6	gudmap_developingGonad_e16.5_ovary_1000_k2
CoexpressionAtlas	FacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1	ARID4A ARGLU1 ZNF638 EIF5B CCAR1 PDAP1 SMC5 PRPF40A	1.37e-04	469	69	8	Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlas	FacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500	TAF3 LUC7L3 ARGLU1 ZNF638 CCAR1 PDAP1 MAP7D2 SRSF11	1.90e-04	492	69	8	Facebase_RNAseq_e10.5_Mandibular Arch_500
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#3_top-relative-expression-ranked_1000	SRRM1 PBRM1 LUC7L3 ATXN2 ARGLU1 SRSF11	1.96e-04	259	69	6	gudmap_developingGonad_e12.5_epididymis_k3_1000
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_top-relative-expression-ranked_1000	SRRM1 PPP2R5E ARGLU1 MAP7D2 SRSF11 ANKRD12 LARP1B CSPP1 ZMAT1 TULP2	1.98e-04	778	69	10	gudmap_developingGonad_e18.5_ovary_1000
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 PDAP1 MCM3 SRSF11 ANKRD12 CSPP1 HDAC2	2.24e-04	790	69	10	gudmap_developingGonad_e16.5_epididymis_1000
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#3_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 SRSF11 ANKRD12	2.70e-04	275	69	6	gudmap_developingGonad_e14.5_ epididymis_1000_k3
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#3_top-relative-expression-ranked_1000	SRRM1 PBRM1 LUC7L3 ATXN2 ARGLU1 SRSF11	2.81e-04	277	69	6	gudmap_developingGonad_e12.5_ovary_k3_1000
CoexpressionAtlas	DevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_1000	SRRM1 PBRM1 PPP2R5E ARGLU1 PDAP1 MCM3 SRSF11 ZFHX3 CSPP1 HDAC2	2.87e-04	815	69	10	gudmap_developingGonad_e11.5_ovary + mesonephros_1000
CoexpressionAtlas	DevelopingGonad_e12.5_testes_emap-29069_top-relative-expression-ranked_1000	ATXN2 PDAP1 MCM3 SREK1 HUWE1 RRM1 CSPP1 PRPF40A TULP2 HDAC2	2.99e-04	819	69	10	gudmap_developingGonad_e12.5_testes_1000
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_k-means-cluster#3_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 SRSF11 HDAC2	3.04e-04	281	69	6	gudmap_developingGonad_e18.5_epididymis_1000_k3
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_1000	LUC7L3 ARID4A SCN9A CCAR1 PDAP1 MAP7D2 SRSF11 KDM7A UPF3B SMC5 ZMAT1	3.15e-04	986	69	11	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_1000
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#2_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 SRSF11 HDAC2	3.21e-04	284	69	6	gudmap_developingGonad_e16.5_epididymis_1000_k2
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5	C17orf75 LUC7L3 ARID4A CCAR1 PDAP1 MAP7D2 UPF3B RERE HUWE1 SMC5	3.35e-04	831	69	10	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlas	FacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#3	TAF3 LUC7L3 ARGLU1 ZNF638 CCAR1 PDAP1 SRSF11 ANKRD12 TNNT3 ZMAT1	3.45e-04	834	69	10	Facebase_RNAseq_e10.5_Mandibular Arch_2500_K3
CoexpressionAtlas	FacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_500_k-means-cluster#4	ARID4A ARGLU1 CCAR1 PDAP1 SMC5	4.03e-04	192	69	5	Facebase_RNAseq_e10.5_Lateral Nasal Eminence_500_K4
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#2_top-relative-expression-ranked_500	SRRM1 ATXN2 ARGLU1 SRSF11	4.10e-04	107	69	4	gudmap_developingGonad_e14.5_ epididymis_500_k2
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_1000_k-means-cluster#4	LUC7L3 ARID4A PDAP1 MAP7D2 UPF3B SMC5	4.15e-04	298	69	6	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_1000_K4
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2	LUC7L3 ARID4A CCAR1 PDAP1 UPF3B SMC5	5.20e-04	311	69	6	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlas	e9.5_MaxilArch_top-relative-expression-ranked_500_2	ESPN PBRM1 MCM3 SMC5 CSPP1	7.48e-04	220	69	5	Facebase_ST1_e9.5_MaxilArch_500_2
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#1_top-relative-expression-ranked_1000	ZFHX3 HUWE1 CSPP1 HDAC2	8.52e-04	130	69	4	gudmap_developingGonad_e12.5_ovary_k1_1000
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#5_top-relative-expression-ranked_1000	PPP2R5E MAP7D2 ANKRD12 LARP1B ZMAT1	9.13e-04	230	69	5	gudmap_developingGonad_e18.5_ovary_1000_k5
CoexpressionAtlas	FacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#1	C17orf75 ARID4A ARGLU1 ITSN2 CCAR1 PDAP1 RERE HUWE1 SMC5	9.17e-04	780	69	9	Facebase_RNAseq_e10.5_Lateral Nasal Eminence_2500_K1
CoexpressionAtlas	DevelopingGonad_P2_testes_emap-30171_k-means-cluster#2_top-relative-expression-ranked_1000	PTMS PPP2R5E PDAP1 MCM3 RRM1 PRPF40A	9.48e-04	349	69	6	gudmap_developingGonad_P2_testes_1000_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_k-means-cluster#1_top-relative-expression-ranked_1000	TFB1M ARID4A HUWE1 CSPP1 PRPF40A TASOR2	9.48e-04	349	69	6	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_k1_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500	LUC7L3 ARID4A CCAR1 PDAP1 MAP7D2 SRSF11 SMC5	1.15e-03	498	69	7	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#3	EIF5B CCAR1 PDAP1 SMC5 PRPF40A	1.23e-03	246	69	5	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K3
CoexpressionAtlas	DevelopingGonad_P2_epididymis_emap-30199_k-means-cluster#3_top-relative-expression-ranked_1000	SRRM1 LUC7L3 ATXN2 ARGLU1 SRSF11	1.30e-03	249	69	5	gudmap_developingGonad_P2_epididymis_1000_k3
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#1_top-relative-expression-ranked_500	ZFHX3 CSPP1 HDAC2	1.36e-03	67	69	3	gudmap_developingGonad_e12.5_ovary_k1_500
CoexpressionAtlas	DevelopingGonad_e12.5_testes_emap-29069_k-means-cluster#3_top-relative-expression-ranked_1000	HUWE1 CSPP1 HDAC2	1.36e-03	67	69	3	gudmap_developingGonad_e12.5_testes_k3_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_top-relative-expression-ranked_1000	TFB1M ARID4A PPP1R12A SRSF11 HUWE1 CSPP1 PRPF40A ZMAT1 TASOR2	1.37e-03	826	69	9	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_1000
CoexpressionAtlas	facebase_RNAseq_e8.5_FloorPlate_2500_K3	SRRM1 LIG1 TFB1M LUC7L3 DNAJC25 EIF5B CCAR1 PDAP1 MCM3 UPF3B SMC5 PRPF40A	1.43e-03	1371	69	12	facebase_RNAseq_e8.5_FloorPlate_2500_K3
CoexpressionAtlas	FacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_1000_k-means-cluster#1	ZNF638 EIF5B PDAP1 MAP7D2 PRPF40A	1.55e-03	259	69	5	Facebase_RNAseq_e8.5_Floor Plate_1000_K1
CoexpressionAtlas	B cells, proB.FrA.BM, CD19- IgM- CD43+ CD24intermediate CD45R+ AA4.1+ CD, Bone marrow, avg-2	LIG1 ARPP21 WDHD1 MCM3 XPC RRM1	1.63e-03	388	69	6	GSM538352_500
CoexpressionAtlas	B cells, proB.CLP.BM, CD19- IgM- CD43+ CD24intermediate CD45R- AA4.1+ CD, Bone marrow, avg-2	LIG1 ARPP21 WDHD1 MCM3 XPC RRM1	1.87e-03	399	69	6	GSM538345_500
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#2_top-relative-expression-ranked_500	SRRM1 ATXN2 ARGLU1 SRSF11	1.92e-03	162	69	4	gudmap_developingGonad_e16.5_epididymis_500_k2
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_500	SRRM1 ATXN2 PDAP1 MCM3 SRSF11 TULP2	1.97e-03	403	69	6	gudmap_developingGonad_e12.5_epididymis_500
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_500	SRRM1 ATXN2 ARGLU1 SRSF11 CSPP1 HDAC2	2.05e-03	406	69	6	gudmap_developingGonad_e16.5_epididymis_500
CoexpressionAtlas	DevelopingGonad_e12.5_testes_emap-29069_top-relative-expression-ranked_500	PDAP1 MCM3 SREK1 RRM1 CSPP1 TULP2	2.05e-03	406	69	6	gudmap_developingGonad_e12.5_testes_500
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_top-relative-expression-ranked_500	PBRM1 SRSF11 ZFHX3 CSPP1 TULP2 HDAC2	2.12e-03	409	69	6	gudmap_developingGonad_e12.5_ovary_500
CoexpressionAtlas	DevelopingGonad_P2_ovary_emap-30224_k-means-cluster#4_top-relative-expression-ranked_1000	MAP7D2 ANKRD12 LARP1B CSPP1	2.19e-03	168	69	4	gudmap_developingGonad_P2_ovary_1000_k4
ToppCell	H1299-infected-SARSCoV2\|infected / Cell line, Condition and Strain	TAF3 LUC7L3 ARID4A ZNF638 EIF5B CCAR1 SRSF11 ANKRD12 UPF3B SREK1 CSPP1 PRPF40A DNMT1	4.54e-18	197	69	13	0fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCell	H1299-infected\|H1299 / Cell line, Condition and Strain	LUC7L3 EIF5B CCAR1 KMT2A SRSF11 ANKRD12 SREK1 CSPP1	6.36e-10	192	69	8	9cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCell	(09)_Interm._secr.>cil.-(2)_GFP_FOXI1\|(09)_Interm._secr.>cil. / shred by cell type by condition	FHAD1 SRRM1 PPP2R5E RWDD1 EIF5B ANKRD12 CSPP1 PRPF40A	8.44e-10	199	69	8	fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell	droplet-Tongue-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SRRM1 PBRM1 LUC7L3 EIF5B SRSF11 CHD4 PRPF40A	1.72e-08	188	69	7	d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell	(10)_Ciliated-(2)_GFP_FOXI1\|(10)_Ciliated / shred by cell type by condition	FHAD1 PPP2R5E RWDD1 EIF5B ANKRD12 CSPP1 PRPF40A	2.55e-08	199	69	7	61b1ed2db71b96157b92b7535d1955a4033098da
ToppCell	(00)_Basal-(2)_GFP_FOXI1\|(00)_Basal / shred by cell type by condition	SRRM1 PPP2R5E ARID4A RWDD1 EIF5B ANKRD12 PRPF40A	2.55e-08	199	69	7	19674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell	(05)_Secretory-(2)_GFP_FOXI1\|(05)_Secretory / shred by cell type by condition	SRRM1 TAF3 PPP2R5E RWDD1 EIF5B ANKRD12 PRPF40A	2.55e-08	199	69	7	d72d87e1e530ed894c0ad5e7b5b2b1d6b59fa098
ToppCell	megakaryocytic-CD34+_Megakaryoblast\|megakaryocytic / Lineage and Cell class	LUC7L3 RNPS1 ARGLU1 EIF5B SRSF11 PRPF40A HDAC2	2.55e-08	199	69	7	99a65887d3c8a2cde26693dd74404b101bba9d58
ToppCell	P15-Mesenchymal-developing_mesenchymal_cell-mesenchymal_proliferating_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	LIG1 WDHD1 MCM3 RRM1 TASOR2 DNMT1	2.81e-07	172	69	6	7c238a7375341d4647ba7274d93fddfb6fae7ce4
ToppCell	droplet-Bladder-nan\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SRRM1 TAF3 EIF5B CHD4 ANKRD12 PRPF40A	4.59e-07	187	69	6	663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCell	human_hepatoblastoma-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	TFB1M LUC7L3 ATXN2 ZNF638 SREK1 RERE	5.35e-07	192	69	6	916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	TFB1M LUC7L3 ATXN2 ZNF638 SREK1 RERE	5.52e-07	193	69	6	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	severe-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	LUC7L3 ARGLU1 KMT2A SRSF11 ANKRD12 SREK1	6.22e-07	197	69	6	57ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell	(11)_FOXN4+-(2)_GFP_FOXI1\|(11)_FOXN4+ / shred by cell type by condition	SRRM1 TAF3 PPP2R5E RWDD1 ANKRD12 PRPF40A	6.41e-07	198	69	6	76d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCell	COVID-19_Mild-PLT_4\|COVID-19_Mild / Disease Group and Platelet Clusters	SRRM1 LUC7L3 ARID4A PPP1R12A ANKRD12 SREK1	6.41e-07	198	69	6	3d8c33dba759df0974aeb2b9a6b5167ae7a18e1f
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	SRRM1 PPP2R5E ITSN2 RWDD1 EIF5B ANKRD12	6.60e-07	199	69	6	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	(04)_Interm._basal>secr.-(2)_GFP_FOXI1\|(04)_Interm._basal>secr. / shred by cell type by condition	SRRM1 PPP2R5E RWDD1 EIF5B ANKRD12 PRPF40A	6.60e-07	199	69	6	53ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCell	(01)_IL1RL1+-(2)_GFP_FOXI1\|(01)_IL1RL1+ / shred by cell type by condition	SRRM1 PPP2R5E ARID4A RWDD1 EIF5B ANKRD12	6.60e-07	199	69	6	a2f7d0cabf35b80fe239fae34a77bf9344d5d743
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	ARGLU1 ITSN2 KMT2A SRSF11 ANKRD12 SREK1	6.80e-07	200	69	6	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	PND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 MCM3 RRM1 DNMT1	7.51e-06	174	69	5	66555c610251ea04f968c258e312d720c18e7cde
ToppCell	TCGA-Brain-Primary_Tumor-Low_Grade_Glioma\|TCGA-Brain / Sample_Type by Project: Shred V9	TAF3 ARPP21 KMT2A ANKRD12 KIF13A	8.16e-06	177	69	5	e8ab340b20cd41554c3841fe980e078e878af35f
ToppCell	facs-Large_Intestine-Proximal-18m-Epithelial-epithelial_cell_of_large_intestine\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PTMS LIG1 EIF5B PDAP1 DNMT1	9.10e-06	181	69	5	9fce5eee75684a7ecac6996e26e9215bc95098b2
ToppCell	facs-Large_Intestine-Proximal-18m-Epithelial-Lgr5-_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PTMS LIG1 EIF5B PDAP1 DNMT1	9.10e-06	181	69	5	ad97e802e934738ddece675232a72308db2da256
ToppCell	droplet-Marrow-nan-3m\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITSN2 ZNF638 DDX23 KMT2A CHD4	9.85e-06	184	69	5	1154a5ad7b8512272b7476f949ddac350910bfb7
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1\|TCGA-Pancreas / Sample_Type by Project: Shred V9	PBRM1 ARID4A PPP1R12A ANKRD12 PRPF40A	1.04e-05	186	69	5	03db813598b67b1e08f759758a1c2023396921fa
ToppCell	droplet-Marrow-nan-3m-Hematologic-megakaryocyte-erythroid_progenitor_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	LIG1 XPC ANKRD12 SMC5 DNMT1	1.06e-05	187	69	5	14c239af77116d28d511dea754b6150d20488080
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	KMT2A ANKRD12 SREK1 HUWE1 TASOR2	1.09e-05	188	69	5	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	3'-GW_trimst-2-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-cycling_stromal\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.18e-05	191	69	5	50854384fdaa0efa2e3227659d544ed09ac102f2
ToppCell	Control-Lymphocyte-T_NK-T_NK_proliferative\|Control / Disease, Lineage and Cell Type	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.27e-05	194	69	5	844731b7943d1cfca819b7b89e4e62067bfa0230
ToppCell	droplet-Lung-LUNG-1m-Myeloid-Proliferating_Alveolar_Macrophage\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.27e-05	194	69	5	effd38e51062b225ecabc7e1c50154e65495d559
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.30e-05	195	69	5	cec7df321f372d05c94f97d6bb18891a5cc3dec3
ToppCell	droplet-Lung-1m-Hematologic-myeloid-alveolar_macrophage-proliferating_alveolar_macrophage\|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.30e-05	195	69	5	c1435e61e4f0cf457f26ae436936048932ceb0db
ToppCell	droplet-Thymus-nan-3m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	LIG1 ARPP21 MCM3 RRM1 DNMT1	1.30e-05	195	69	5	7ae732f100e9a3c6062be5b877efa1ec9d5b3958
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.30e-05	195	69	5	56d8734d020b3da08a5aa9e67999706a9e023a99
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.30e-05	195	69	5	b65463a804fed2d9a3be9e528ca8b9c98469bc86
ToppCell	COVID-19_Severe-PLT_4\|World / Disease Group and Platelet Clusters	SRRM1 LUC7L3 ARID4A PPP1R12A SREK1	1.34e-05	196	69	5	ad43efdd4d73b6615f65f06a315b33576e317473
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.34e-05	196	69	5	df366d76ea55f49e349d622effa57c1535df8400
ToppCell	CV-Moderate-6\|CV / Virus stimulation, Condition and Cluster	PTMS PBRM1 EIF5B KMT2A HUWE1	1.34e-05	196	69	5	7bced0cc2112697593c478fa291b8ed3941fb811
ToppCell	droplet-Thymus-nan-18m-Lymphocytic-DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	LIG1 ARPP21 MCM3 RRM1 DNMT1	1.34e-05	196	69	5	5ddd314d3def3776dc7da83778d41c6436ca51ac
ToppCell	10x3'2.3-week_12-13-Lymphocytic_B-B_lineage-pre_B_progenitor\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	ARPP21 ARGLU1 SRSF11 RRM1 DNMT1	1.37e-05	197	69	5	106b0f9a0425facc634feb7498c9ba2c55edfbf8
ToppCell	droplet-Thymus-nan-21m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	LIG1 ARPP21 MCM3 RRM1 DNMT1	1.37e-05	197	69	5	a0d463825b62de49466f9fa563405dda4387cfff
ToppCell	COVID-19_Severe-PLT_4\|COVID-19_Severe / Disease Group and Platelet Clusters	SRRM1 LUC7L3 ARID4A PPP1R12A SREK1	1.40e-05	198	69	5	abfddbee99ef8c7719e6e6f62571e9be030e4acf
ToppCell	Immune_cells-large_pre-B.\|Immune_cells / Lineage and Cell class	LIG1 MCM3 RRM1 DNMT1 HDAC2	1.40e-05	198	69	5	bc9ceefadb153907d2854d1f736d17349003cb31
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	123fbf2122aa221d8cbf3aef9361ba0982c07695
ToppCell	mild-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	LUC7L3 ARGLU1 SRSF11 ANKRD12 SREK1	1.44e-05	199	69	5	f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCell	COVID-19_Severe-Lymphoid_T/NK-T/NK_proliferative\|COVID-19_Severe / Disease group, lineage and cell class	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	ddae7fe7633661f15d3c79f5187415ffbfecce67
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	e98ff036d04fc78dffef156bdc0d644532274067
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	fba48342066aab41a8bcb20db40a6df0158e1cbe
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	305a9ade5bbe8e981e7c641c9a5e0c9f8ef60470
ToppCell	10x3'2.3-week_12-13-Lymphocytic_B-B_lineage\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	ARPP21 ARGLU1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	fe3b7d540a644dfc6beea171c809b4d1ba4e188f
ToppCell	(02)_MMP9/10+-(2)_GFP_FOXI1\|(02)_MMP9/10+ / shred by cell type by condition	PPP2R5E ITSN2 RWDD1 XPC ANKRD12	1.44e-05	199	69	5	18a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	6b1304417cf9c44ca70d2bfc2b5acc1a206f25b6
ToppCell	356C-Lymphocytic-NK_cells-Proliferating_NK_cell\|356C / Donor, Lineage, Cell class and subclass (all cells)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	e3b69608c834bd8ce6bedde298a2763cc0d7d573
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	7feedb0bf84a3361c8ab5b6674ff64e8ff140c23
ToppCell	10x3'2.3-week_12-13-Lymphocytic_B\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	ARPP21 ARGLU1 MCM3 RRM1 DNMT1	1.44e-05	199	69	5	cdee798e3586e4e7a15de598239090a85752ea1e
ToppCell	356C-Lymphocytic-NK_cells-Proliferating_NK_cell\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	5d11a2c0021805e78d97dc1638bf73ca1faede66
ToppCell	COVID_non-vent-Lymphocytic-Proliferative_Lymphocyte-\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	04bf9e6a0fbd792b49eed63dabba5d6fafed8c07
ToppCell	Control-Control-Lymphocyte-T/NK-T/NK_proliferative\|Control / Disease, condition lineage and cell class	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	6cf63dd57f6bc0c42e7182322dd24ff9afbe9186
ToppCell	356C-Lymphocytic-NK_cells-Proliferating_NK_cell\|NK_cells / Donor, Lineage, Cell class and subclass (all cells)	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	97e47eb69d1d4cab45256acca9589837eb7817e7
ToppCell	COVID-19-COVID-19_Severe-Lymphocyte-T/NK-T/NK_proliferative\|COVID-19_Severe / Disease, condition lineage and cell class	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	0892603e604c2a945dd720685d45970f855bd5d3
ToppCell	myeloid-pro-cDC\|myeloid / Lineage and Cell class	LIG1 MCM3 RRM1 DNMT1 HDAC2	1.47e-05	200	69	5	4aa2308eeb94e0bdff4e02eb9e45ba8837ae14bf
ToppCell	control-T/NK_proliferative\|control / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	1da366e35a05f73253629663eeea1fed4ebd7b52
ToppCell	COVID_vent-Lymphocytic-Proliferative_Lymphocyte-\|COVID_vent / Disease condition, Lineage, Cell class and subclass	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	7e4c0db43a03ca11380a54f44a3cf1991e055b80
ToppCell	LPS_IL1RA-Mesenchymal_myocytic-Pericyte\|LPS_IL1RA / Treatment groups by lineage, cell group, cell type	FHAD1 PPP1R12A LMOD1 ZFHX3 TNNT3	1.47e-05	200	69	5	b22cae282591d8dead9869c2adbb9632615f50f7
ToppCell	COVID_non-vent-Lymphocytic-Proliferative_Lymphocyte\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	f6b5320cdfe640a71e6e2df26f30d42e64b1c921
ToppCell	COVID_vent-Lymphocytic-Proliferative_Lymphocyte\|COVID_vent / Disease condition, Lineage, Cell class and subclass	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	9775ca7dedb76fcbb74f80f86b33c94e394c320a
ToppCell	Sepsis-Leuk-UTI-Lymphocyte-T/NK-T/NK_proliferative\|Leuk-UTI / Disease, condition lineage and cell class	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	093e97395be23092229521cc55aaaee8befbc149
ToppCell	mild-T/NK_proliferative\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	LIG1 WDHD1 MCM3 RRM1 DNMT1	1.47e-05	200	69	5	63cc57b9331459efbb73051d174d198a3568b938
ToppCell	ILEUM-non-inflamed-(3)_MNP-(3)_moDC\|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	ATXN2 ANKRD12 SREK1 ZMAT1	5.76e-05	135	69	4	b7a792a7c0c22d8b703509f134115f0e394d7de0
ToppCell	PND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP1-CAP1_prolif\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 ARPP21 MCM3 RRM1	7.81e-05	146	69	4	2d907e50206c4762a8baa741363bc7f0a04bd84e
ToppCell	3'_v3-Lung-Lymphocytic_T_CD4-T_CD4/CD8\|Lung / Manually curated celltypes from each tissue	LUC7L3 ARGLU1 KMT2A ANKRD12	8.90e-05	151	69	4	999c11d19b61d6b130ad5e623afa83cbdfe13cdd
ToppCell	PND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-NK-NK_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 RRM1 DNMT1	1.03e-04	157	69	4	8b2a85de2b1b56b9aa250b48c09e19f8f05708cd
ToppCell	droplet-Kidney-KIDNEY-30m-Lymphocytic-Epcam____proximal_tube_epithelial_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITSN2 RNF40 KIF13A ZMAT1	1.06e-04	158	69	4	1d78578dc1f8ba43dacdccae1082c0b9d749f64d
ToppCell	PND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_prolif\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 RRM1 DNMT1	1.11e-04	160	69	4	ec81814f3a475ba9bc049cb793bf93bc0b650d37
ToppCell	PND01-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_prolif\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 MCM3 RRM1	1.25e-04	165	69	4	ba68090d79e2243af2bdee0c27a32e65f540f8ac
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling-Cycling_Connecting_Tubule_Cell_S-high\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	LIG1 WDHD1 RRM1 DNMT1	1.31e-04	167	69	4	108ae6221c6edc63c0ec42c42471b3a15a594043
ToppCell	PND10-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_prolif\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 MAP7D2 LMOD1 TNNT3	1.31e-04	167	69	4	784776d1fcc098f84d3c2eca58fa56cb9428f434
ToppCell	PND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD8_T-CD8_T_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 MCM3 DNMT1	1.34e-04	168	69	4	ade02beb8d663fce4be2aefa10392ab849a4bbe7
ToppCell	Striatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Gad1Gad2.Sgol2a_(Very_small_cluster)--\|Striatum / BrainAtlas - Mouse McCarroll V32	ARGLU1 FRG1 RWDD1 SMC5	1.37e-04	169	69	4	5375eb52ebadccb7bfff997a11985f23e81014d6
ToppCell	Striatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Gad1Gad2.Sgol2a_(Very_small_cluster)\|Striatum / BrainAtlas - Mouse McCarroll V32	ARGLU1 FRG1 RWDD1 SMC5	1.37e-04	169	69	4	c3bf0cb67f200d02d5a021754e9b2a68d23ea168
ToppCell	Striatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Gad1Gad2.Sgol2a_(Very_small_cluster)-\|Striatum / BrainAtlas - Mouse McCarroll V32	ARGLU1 FRG1 RWDD1 SMC5	1.37e-04	169	69	4	1c132d21255f5a5174ac38db4e91927f9093418e
ToppCell	PND10-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-VEC-VEC_prolif\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 ATXN2 RRM1	1.37e-04	169	69	4	f086b50791e1c93e253eb5e8d6c4bf617b1416c3
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	FHAD1 AK9 CSPP1 CFAP46	1.37e-04	169	69	4	14aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCell	PND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 MCM3 RRM1 DNMT1	1.47e-04	172	69	4	2b6cd84c946b1e800caba452ae70145ea285fec1
ToppCell	facs-Large_Intestine-Distal-18m-Epithelial-epithelial_cell_of_large_intestine\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PTMS LIG1 CHD4 DNMT1	1.50e-04	173	69	4	a5172dee859bf6c2eed46c48bd64dfef0ff9f28f
ToppCell	facs-Large_Intestine-Distal-18m-Epithelial-Lgr5-_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PTMS LIG1 CHD4 DNMT1	1.50e-04	173	69	4	639b5b0b33ce5aa0bc26363c059717012ddc14c0
ToppCell	PND03-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 LMOD1 MCM3 TNNT3	1.50e-04	173	69	4	5c55e1e27e9e3e77600d378cc87b51cc73907527
ToppCell	PND10-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 MCM3 RRM1 DNMT1	1.54e-04	174	69	4	c988471207ba06195bc3e41056435e8c31c20bbe
ToppCell	PND07-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_prolif\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MAP7D2 LMOD1 MCM3 TNNT3	1.54e-04	174	69	4	9f2e253694eb5860c00528fda31c305c6de8a2a1
ToppCell	facs-Limb_Muscle-Muscle_Diaphragm-18m-Lymphocytic-nan\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MCM3 RRM1 PTGDR DNMT1	1.57e-04	175	69	4	db6be3e9e339918418fcaf9001ea15207aa6c993
ToppCell	facs-Limb_Muscle-Muscle_Diaphragm-18m-Lymphocytic\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MCM3 RRM1 PTGDR DNMT1	1.57e-04	175	69	4	8acac10c9eedccebcf3a3fe31bfee35afa54579f
ToppCell	PND03-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	WDHD1 MCM3 RRM1 DNMT1	1.60e-04	176	69	4	270d7908dbd84028958d257f94941dc685e20255
ToppCell	PND14-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_prolif\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 MCM3 RRM1 DNMT1	1.60e-04	176	69	4	9e719e6323597ecfc758c957256872cd4ae24d4d
ToppCell	PND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_prolif\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 MCM3 RRM1 DNMT1	1.64e-04	177	69	4	f10f77130dbb2c0ad1b436ceb4fb1deac2b0267c
ToppCell	PND03-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	LIG1 WDHD1 MCM3 DNMT1	1.64e-04	177	69	4	8a74f5e72de605774111057bd87a7e7e4a6385cd
ToppCell	facs-Limb_Muscle-Muscle_Diaphragm-18m-Lymphocytic-T_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MCM3 RRM1 PTGDR DNMT1	1.68e-04	178	69	4	5ac5257d88fa0dc67714881d6f005f6cea925710
ToppCell	droplet-Spleen-nan-3m-Lymphocytic-immature_NKT_cell\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	LIG1 MCM3 RRM1 DNMT1	1.71e-04	179	69	4	54621d2b3a66e62aa76b7e444118878ed97c1e02
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_S-high\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	LIG1 WDHD1 MCM3 RRM1	1.71e-04	179	69	4	80112c686a8f85ad5e3cda6e3f3d3d51cf688092
ToppCell	PBMC-Control-cDC_12\|Control / Compartment, Disease Groups and Clusters	LIG1 WDHD1 MCM3 RRM1	1.82e-04	182	69	4	4774066d0f9986abc3d13a2a3bc99ce4f1327ae0
ToppCell	droplet-Marrow-nan-3m-Hematologic\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITSN2 DDX23 CHD4 SMC5	1.82e-04	182	69	4	1710eab3037a87609d21838be2d2d29c3bc36651
Computational	Genes upregulated in subsets of cells of a given type within various tumors	ARGLU1 ZNF638 KMT2A SMC5 TASOR2	5.18e-06	50	55	5	GAVISH_3CA_MALIGNANT_METAPROGRAM_4_CHROMATIN
Computational	Genes upregulated in subsets of cells of a given type within various tumors	LUC7L3 EIF5B KMT2A ANKRD12	1.10e-04	49	55	4	GAVISH_3CA_MALIGNANT_METAPROGRAM_41_UNASSIGNED
Computational	Neighborhood of GNB1	SRRM1 RNPS1 SF3A1 CHD4 RRM1 PRPF40A DNMT1 HDAC2	1.46e-04	305	55	8	MORF_GNB1
Computational	Neighborhood of RRM1	SRRM1 MCM3 RRM1 DNMT1 HDAC2	1.66e-04	102	55	5	MORF_RRM1
Computational	TFs and nuclear.	LIG1 WDHD1 DDX23 KMT2A MCM3 DNMT1 HDAC2	1.91e-04	237	55	7	MODULE_252
Computational	Neighborhood of RAB11A	PPP2R5E ATXN2 PSMC2 XPC	2.42e-04	60	55	4	MORF_RAB11A
Computational	Neighborhood of XPC	PSMC2 PDAP1 XPC HUWE1	2.58e-04	61	55	4	MORF_XPC
Computational	Neighborhood of DNMT1	SRRM1 MCM3 RRM1 DNMT1 HDAC2	3.29e-04	118	55	5	MORF_DNMT1
Computational	RNA splicing.	SF3A1 ZNF638 DDX23 SRSF11	3.30e-04	65	55	4	MODULE_183
Computational	Neighborhood of MSH2	LIG1 MCM3 RRM1	3.79e-04	28	55	3	GNF2_MSH2
Computational	Neighborhood of RAB1A	PPP2R5E ATXN2 PSMC2 PDAP1 XPC HUWE1	4.32e-04	193	55	6	MORF_RAB1A
Computational	Genes in the cancer module 98.	LIG1 DDX23 KMT2A MCM3 SRSF11 CHD4 DNMT1 HDAC2	8.02e-04	393	55	8	MODULE_98
Computational	Genes in the cancer module 198.	LIG1 DDX23 KMT2A MCM3 CHD4 DNMT1 HDAC2	8.39e-04	303	55	7	MODULE_198
Computational	Neighborhood of CDC10	SRRM1 RNPS1 FRG1 SRSF11 SMC5	8.70e-04	146	55	5	MORF_CDC10
Computational	Neighborhood of RFC4	SRRM1 MCM3 RRM1 DNMT1 HDAC2	1.01e-03	151	55	5	MORF_RFC4
Computational	Neighborhood of CCNI	SRRM1 RNPS1 SF3A1 CHD4	1.04e-03	88	55	4	MORF_CCNI
Computational	Neighborhood of XRCC5	SRRM1 RNPS1 RRM1 PRPF40A DNMT1 HDAC2	1.21e-03	235	55	6	MORF_XRCC5
Computational	DNA replication.	LIG1 MCM3 RRM1	1.35e-03	43	55	3	MODULE_158
Computational	Genes in the cancer module 125.	LIG1 MCM3 RRM1	1.45e-03	44	55	3	MODULE_125
Computational	Neighborhood of PPP1CC	SRRM1 MCM3 RRM1 DNMT1 HDAC2	1.54e-03	166	55	5	MORF_PPP1CC
Computational	Genes in the cancer module 123.	KMT2A MCM3 ZFHX3 CHD4 DNMT1 HDAC2	1.57e-03	247	55	6	MODULE_123
Computational	Neighborhood of RAD23A	SRRM1 RNPS1 SF3A1 MCM3 CHD4 DNMT1 HDAC2	1.87e-03	348	55	7	MORF_RAD23A
Computational	Genes in the cancer module 197.	WDHD1 KMT2A MCM3 DNMT1 HDAC2	1.90e-03	174	55	5	MODULE_197
Computational	Neighborhood of RAD54L	SRRM1 RRM1 DNMT1 HDAC2	2.00e-03	105	55	4	MORF_RAD54L
Computational	Genes upregulated in subsets of cells of a given type within various tumors	ARGLU1 ITSN2 KMT2A	2.10e-03	50	55	3	GAVISH_3CA_METAPROGRAM_B_CELLS_B_CELLS_1
Computational	Genes upregulated in subsets of cells of a given type within various tumors	LUC7L3 ARGLU1 ZNF638	2.10e-03	50	55	3	GAVISH_3CA_METAPROGRAM_FIBROBLASTS_CAF_4
Computational	Genes upregulated in subsets of cells of a given type within various tumors	MCM3 RRM1 DNMT1	2.10e-03	50	55	3	GAVISH_3CA_MALIGNANT_METAPROGRAM_2_CELL_CYCLE_G1_S
Computational	Neighborhood of RFC1	FRG1 EIF5B RERE SMC5	2.29e-03	109	55	4	MORF_RFC1
Computational	Neighborhood of RAF1	SRRM1 PPP2R5E PDAP1 XPC	2.45e-03	111	55	4	MORF_RAF1
Computational	Neighborhood of PRKDC	SRRM1 MCM3 RRM1 DNMT1 HDAC2	2.85e-03	191	55	5	MORF_PRKDC
Computational	Neighborhood of RFC4	LIG1 MCM3 RRM1	3.53e-03	60	55	3	GNF2_RFC4
Computational	Neighborhood of ESPL1	MCM3 RRM1 DNMT1	3.70e-03	61	55	3	MORF_ESPL1
Computational	Neighborhood of RAC1	PPP2R5E ATXN2 PSMC2 PDAP1 XPC	4.45e-03	212	55	5	MORF_RAC1
Disease	Hereditary Sensory Autonomic Neuropathy, Type 2	SCN9A DNMT1	5.36e-05	5	69	2	C0020072
Disease	Sensory Neuropathy, Hereditary	SCN9A DNMT1	8.03e-05	6	69	2	C0699739
Disease	Hereditary Sensory Autonomic Neuropathy, Type 5	SCN9A DNMT1	1.12e-04	7	69	2	C0020075
Disease	syndromic X-linked intellectual disability (implicated_via_orthology)	KDM7A HUWE1	1.50e-04	8	69	2	DOID:0060309 (implicated_via_orthology)
Disease	alopecia areata (is_marker_for)	DNMT1 HDAC2	2.40e-04	10	69	2	DOID:986 (is_marker_for)
Disease	acute myeloid leukemia (implicated_via_orthology)	ARID4A KMT2A	3.50e-04	12	69	2	DOID:9119 (implicated_via_orthology)
Disease	congenital heart disease (implicated_via_orthology)	RNF20 KMT2A RNF40	5.74e-04	69	69	3	DOID:1682 (implicated_via_orthology)
Disease	Autosome Abnormalities	KMT2A XPC	6.33e-04	16	69	2	C0004403
Disease	Chromosome Aberrations	KMT2A XPC	6.33e-04	16	69	2	C0008625
Disease	cardiovascular disease	SRRM1 POLR1A ATXN2 DDX23 RERE DNMT1	7.03e-04	457	69	6	EFO_0000319
Disease	Myeloid Leukemia	KMT2A HDAC2	8.05e-04	18	69	2	C0023470
Disease	Leukemia, Monocytic, Chronic	KMT2A HDAC2	8.05e-04	18	69	2	C0023466
Disease	anxiety disorder (implicated_via_orthology)	SCN9A HDAC2	1.21e-03	22	69	2	DOID:2030 (implicated_via_orthology)
Disease	Micronuclei, Chromosome-Defective	PPP2R5E XPC	1.69e-03	26	69	2	C1449861
Disease	Micronuclei, Genotoxicant-Induced	PPP2R5E XPC	1.69e-03	26	69	2	C1449862
Disease	neutrophil count, basophil count	ATXN2 ITSN2 RERE DNMT1	1.90e-03	224	69	4	EFO_0004833, EFO_0005090
Disease	suicidal ideation	ZFHX3 CFAP46	2.10e-03	29	69	2	EFO_0004320
Disease	response to angiotensin receptor blocker	POLR1A TNNT3	2.25e-03	30	69	2	EFO_0010735

Protein segments in the cluster

Peptide	Gene	Start	Entry
SDRQREKKKEKEREE	PPP2R5E	431	Q16537
DTVKSVLDKDRKEDD	COP1	681	Q8NHY2
REKAKVEETKRKESE	RNF40	636	O75150
SEKDEKRDEERQKSK	ARID4A	651	P29374
EREKQKLKESEKERD	RNF20	591	Q5VTR2
RAKSDESIKEEDKDQ	DNMT1	186	P26358
ESIKEEDKDQDEKRR	DNMT1	191	P26358
ISDEKDEDEKEEKRR	DNMT1	311	P26358
DEDEKEEKRRKTTPK	DNMT1	316	P26358
KSEDDKEEEERKRQE	CCAR1	696	Q8IX12
SKKDERKDKKEERDD	CCAR1	806	Q8IX12
KSGDDKDKKEDRDER	CCAR1	831	Q8IX12
DRDERKKEDKRKDDS	CCAR1	841	Q8IX12
KRSSLDEKQKREEEE	ARGLU1	91	Q9NWB6
KESSKENELRKDERK	CDKL3	316	Q8IVW4
ENERSKEKEKERSKE	CFAP46	1366	Q8IYW2
KEKEKERSKEKENER	CFAP46	1371	Q8IYW2
ERSKEKENERSKEKD	CFAP46	1376	Q8IYW2
RDKIKKESEKSFREE	ANKRD12	751	Q6UB98
QEEDKSRKDDSEREK	ARPP21	101	Q9UBL0
SRKDDSEREKEKDKN	ARPP21	106	Q9UBL0
KDVKEKNRTSEEAED	PTGDR	291	Q13258
EERKAEEKQRKDKDT	ITSN2	731	Q9NZM3
EDKLKREEEKREAEK	PBRM1	916	Q86U86
TADSENEEDKRRTKK	KDM7A	601	Q6ZMT4
EERKRQEEEKKKQEG	MAP7D2	456	Q96T17
EEAARKKEEERKAKD	PDAP1	151	Q13442
REAAEKKKKEDEDRS	SPINK5	816	Q9NQ38
KKKKEDEDRSNTGER	SPINK5	821	Q9NQ38
REANERKKKDEEKSS	SPINK5	891	Q9NQ38
KDDKEEKKDAAEQVR	ATXN2	896	Q99700
KKLEEEREQKRKEEE	ESPN	796	B1AK53
KKEDDEKVKGERRNT	LMOD1	216	P29536
ERQKEAERKKKEEEE	CSPP1	841	Q1MSJ5
KSRDREQDRKSKEKE	LUC7L3	366	O95232
EQDRKSKEKEKRGSD	LUC7L3	371	O95232
FKSRKDRDSKKDEED	DDX23	116	Q9BUQ8
EEGRQKIREEKDKSK	DDX23	231	Q9BUQ8
ETKITDKGKEDKENR	HUWE1	2701	Q7Z6Z7
EVKESDEKTKRDINR	C17orf75	231	Q9HAS0
EREKDKKEKDRESEK	PRPF40A	891	O75400
KKEKDRESEKDRTRQ	PRPF40A	896	O75400
EKKRKKRSEDESETE	MCM3	661	P25205
SEKTEKKEEVVKRDR	UPF3B	416	Q9BZI7
KNKKSKEEIRDEEEN	DNAJC25	206	Q9H1X3
SKDKKRKREEDEETQ	FRG1	26	Q14331
REKSKVEEKLQEDSR	FHAD1	451	B1AJZ9
RKESKEEKENQDERE	AXDND1	971	Q5T1B0
EELSKDRDADKSVEK	KMT2A	856	Q03164
DRDADKSVEKDKSRE	KMT2A	861	Q03164
RIEEDKKETEDKKTD	HDAC2	446	Q92769
KKSKSKRKEEEEEED	CHD4	126	Q14839
SEDEDREAKRKKEEE	LIG1	141	P18858
EKEEKVEKRSNSDSK	LARP1B	31	Q659C4
DAAAKKREEENKRKE	INVS	591	Q9Y283
SKREKKIDSEEEENE	KIF13A	1521	Q9H1H9
GADQRKTKEDEKDDK	PSMC2	6	P35998
DREREKDKNKDKSKE	TAF3	541	Q5VWG9
KKKKEEEEARKATEE	AK9	696	Q5TCS8
RKDRSDEKSKDRSKD	RNPS1	31	Q15287
DASDAKRKEKQEEEV	POLR1A	1411	O95602
EDEDNSKKIKERSRI	EIF5B	166	O60841
RLKERRDEEKKETKE	SNRNP27	66	Q8WVK2
RDEEKKETKETKSKE	SNRNP27	71	Q8WVK2
QDRTEKEDKGKDSKE	SCN9A	1971	Q15858
LKRRKSKNEEKEEDD	TFB1M	326	Q8WVM0
DKDKDKEKDRDRDRD	RERE	6	Q9P2R6
EKDREKDKEKDRERE	SREK1	306	Q8WXA9
KDKEKDREREREKEH	SREK1	311	Q8WXA9
EQDKEKEREKDRSKE	SREK1	336	Q8WXA9
KEREKDRSKEIDEKR	SREK1	341	Q8WXA9
KFQERERKKEEEEKE	SF3A1	251	Q15459
DKKEEAEGKNTKRRE	C10orf120	226	Q5SQS8
QKEEDLEKKREASES	TULP2	211	O00295
SKDKEKDRERKSESD	SRSF11	401	Q05519
KDRERKSESDKDVKQ	SRSF11	406	Q05519
EKVSKEEEEKERNTA	RRM1	761	P23921
EKASRKERKKEVVEE	PTMS	26	P20962
KKRKRVVDESDETEN	WDHD1	1081	O75717
KDKRDKEEKESSREK	SRRM1	151	Q8IYB3
EEDAKRRAEDDLKKK	TNNT3	141	P45378
RENKKLKEDERVDST	TASOR2	2321	Q5VWN6
SKAKSKARREEEEED	XPC	21	Q01831
RREEEKKQKEKEAEE	RWDD1	121	Q9H446
RERETLEKEKKSVDD	SMC5	426	Q8IY18
KDSEPERKRKKTEDS	ZNF638	1891	Q14966
EDTDLDKDKSIRQRK	ZMAT1	566	Q5H9K5
VIKEKEKESQRERDS	ZFHX3	1881	Q15911
DKEKQEEKKESETSR	PPP1R12A	736	O14974