Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionGTPase activator activity

DOCK5 TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

3.06e-092798712GO:0005096
GeneOntologyMolecularFunctionheparan sulfate sulfotransferase activity

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

4.06e-0915875GO:0034483
GeneOntologyMolecularFunction[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

1.16e-087874GO:0008467
GeneOntologyMolecularFunctionnucleoside-triphosphatase regulator activity

DOCK5 TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

1.99e-065078712GO:0060589
GeneOntologyMolecularFunctionGTPase regulator activity

DOCK5 TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

1.99e-065078712GO:0030695
GeneOntologyMolecularFunctionsulfotransferase activity

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

4.10e-0655875GO:0008146
GeneOntologyMolecularFunctiontransferase activity, transferring sulphur-containing groups

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

1.78e-0574875GO:0016782
GeneOntologyMolecularFunction[heparan sulfate]-glucosamine 3-sulfotransferase 3 activity

HS3ST3B1 HS3ST3A1

1.88e-052872GO:0033872
GeneOntologyMolecularFunctionenzyme activator activity

DOCK5 TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

2.67e-056568712GO:0008047
GeneOntologyMolecularFunctionmolecular function activator activity

DOCK5 CARTPT SEMA4D TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I CXCL11 TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

2.62e-0412338715GO:0140677
GeneOntologyBiologicalProcessactivation of GTPase activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

9.42e-131098611GO:0090630
GeneOntologyBiologicalProcesspositive regulation of GTPase activity

SEMA4D TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

4.04e-102448612GO:0043547
GeneOntologyBiologicalProcessregulation of GTPase activity

SEMA4D TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F EPHA5

1.30e-093358613GO:0043087
GeneOntologyBiologicalProcessheparan sulfate proteoglycan metabolic process

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

6.66e-0917865GO:0030201
GeneOntologyBiologicalProcesspositive regulation of hydrolase activity

SEMA4D TBC1D3E TBC1D3 TBC1D3H TBC1D3L P2RX1 TBC1D3D XDH TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

1.81e-084998614GO:0051345
GeneOntologyBiologicalProcessheparan sulfate proteoglycan biosynthetic process, enzymatic modification

NDST2 HS3ST6 HS3ST3B1 HS3ST3A1

1.36e-0712864GO:0015015
GeneOntologyBiologicalProcessheparan sulfate proteoglycan biosynthetic process

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

3.30e-0735865GO:0015012
GeneOntologyBiologicalProcessregulation of hydrolase activity

PPP1R26 SEMA4D TBC1D3E TBC1D3 TBC1D3H TBC1D3L P2RX1 TBC1D3D XDH TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F EPHA5

5.99e-078788616GO:0051336
GeneOntologyBiologicalProcesspositive regulation of catalytic activity

CARTPT SEMA4D TBC1D3E TBC1D3 TBC1D3H TBC1D3L P2RX1 SASH1 TBC1D3D XDH TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F EPHA5

9.74e-0710288617GO:0043085
GeneOntologyBiologicalProcesspositive regulation of molecular function

CARTPT SEMA4D TBC1D3E ZBTB7A TBC1D3 TBC1D3H TBC1D3L P2RX1 SASH1 TBC1D3D XDH TBC1D3I TBC1D3G TBC1D3C TBC1D3B RPL11 TBC1D3K TBC1D3F EPHA5

5.24e-0614308619GO:0044093
GeneOntologyBiologicalProcessproteoglycan biosynthetic process

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

1.10e-0570865GO:0030166
GeneOntologyBiologicalProcessproteoglycan metabolic process

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

5.34e-0597865GO:0006029
DomainTBC

TBC1D3E TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

1.57e-14498510SM00164
DomainRabGAP-TBC

TBC1D3E TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

3.67e-14538510PF00566
DomainTBC_RABGAP

TBC1D3E TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

5.47e-14558510PS50086
DomainRab-GTPase-TBC_dom

TBC1D3E TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

5.47e-14558510IPR000195
DomainSulfotransferase_dom

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

5.85e-0736855IPR000863
DomainSulfotransfer_1

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

5.85e-0736855PF00685
DomainAT_hook

CCDC71 CECR2 KMT2A ZBTB24

6.97e-0716854PF02178
DomainBROMODOMAIN_2

CECR2 KMT2A BRD1 BRWD3

3.56e-0541854PS50014
DomainBROMO

CECR2 KMT2A BRD1 BRWD3

3.92e-0542854SM00297
DomainBromodomain

CECR2 KMT2A BRD1 BRWD3

3.92e-0542854IPR001487
Domain-

CECR2 KMT2A BRD1 BRWD3

3.92e-05428541.20.920.10
DomainHMGI/Y_DNA-bd_CS

CCDC71 CECR2 ZBTB24

3.73e-0431853IPR000637
DomainBROMODOMAIN_1

CECR2 BRD1 BRWD3

6.32e-0437853PS00633
DomainBromodomain

CECR2 BRD1 BRWD3

6.84e-0438853PF00439
DomainEPHD

KMT2A BRD1

4.46e-0322852PS51805
DomainQuino_amine_DH_bsu

TEP1 BRWD3

4.46e-0322852IPR011044
DomainBromodomain_CS

CECR2 BRD1

6.20e-0326852IPR018359
DomainAT_hook

KMT2A ZBTB24

6.67e-0327852SM00384
DomainAT_hook_DNA-bd_motif

KMT2A ZBTB24

6.67e-0327852IPR017956
PathwayWP_17Q12_COPY_NUMBER_VARIATION_SYNDROME

TBC1D3E TBC1D3 TBC1D3H TBC1D3L FBXL20 TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K

2.03e-11996410M46448
PathwayREACTOME_HS_GAG_BIOSYNTHESIS

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

1.80e-0729645MM14802
PathwayREACTOME_HS_GAG_BIOSYNTHESIS

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

2.55e-0731645M685
PathwayREACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

4.38e-0654645MM14633
PathwayREACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

5.74e-0657645M692
PathwayKEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE

NDST2 HS3ST3B1 HS3ST3A1

2.15e-0426643M7330
PathwayREACTOME_GLYCOSAMINOGLYCAN_METABOLISM

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

2.36e-04123645MM14623
PathwayREACTOME_GLYCOSAMINOGLYCAN_METABOLISM

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

2.63e-04126645M695
Pubmed

TBC1D3, a hominoid oncoprotein, is encoded by a cluster of paralogues located on chromosome 17q12.

TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

2.10e-2911911116863688
Pubmed

DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.

TBC1D3E TBC1D3 TBC1D3H TBC1D3D TBC1D3G TBC1D3B TBC1D3F

1.04e-097491716625196
Pubmed

PRC17, a novel oncogene encoding a Rab GTPase-activating protein, is amplified in prostate cancer.

TBC1D3 TBC1D3D TBC1D3F

6.92e-08491312359748
Pubmed

Identification of novel sequences in the repertoire of hypervariable TRE17 genes from immortalized nonmalignant and malignant human keratinocytes.

TBC1D3 TBC1D3D TBC1D3F

6.92e-0849138406013
Pubmed

The Tre2 (USP6) oncogene is a hominoid-specific gene.

TBC1D3 TBC1D3D TBC1D3C

1.73e-07591312604796
Pubmed

Human TRE17 oncogene is generated from a family of homologous polymorphic sequences by single-base changes.

TBC1D3 TBC1D3D TBC1D3F

1.73e-0759138471161
Pubmed

Loss of Hs3st3a1 or Hs3st3b1 enzymes alters heparan sulfate to reduce epithelial morphogenesis and adult salivary gland function.

NDST2 HS3ST6 HS3ST3B1 HS3ST3A1

4.48e-072491434653670
Pubmed

Specific 3-O-sulfated heparan sulfate domains regulate salivary gland basement membrane metabolism and epithelial differentiation.

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

2.40e-068191539217171
Pubmed

Developmental and regional expression of heparan sulfate sulfotransferase genes in the mouse brain.

NDST2 HS3ST4 HS3ST3B1

2.82e-061191315944372
Pubmed

Attenuated purinergic receptor function in patients with type 2 diabetes.

P2RX1 P2RY2

6.77e-06291219808895
Pubmed

Specificity of MLL1 and TET3 CXXC domains towards naturally occurring cytosine modifications.

KMT2A TET3

6.77e-06291230352306
Pubmed

A novel role for 3-O-sulfated heparan sulfate in herpes simplex virus 1 entry.

HS3ST3B1 HS3ST3A1

6.77e-06291210520990
Pubmed

Structural analysis of the sulfotransferase (3-o-sulfotransferase isoform 3) involved in the biosynthesis of an entry receptor for herpes simplex virus 1.

HS3ST3B1 HS3ST3A1

6.77e-06291215304505
Pubmed

Genetic variations in genes involved in heparan sulphate biosynthesis are associated with Plasmodium falciparum parasitaemia: a familial study in Burkina Faso.

HS3ST3B1 HS3ST3A1

6.77e-06291222475533
Pubmed

XDH genotypes through gene-gene interactions with NUDT15 affect azathioprine-induced leukopenia in Chinese patients.

XDH NUDT15

6.77e-06291235916133
Pubmed

ATP-induced vasodilation and purinergic receptors in the human leg: roles of nitric oxide, prostaglandins, and adenosine.

P2RX1 P2RY2

6.77e-06291219118095
Pubmed

Multiple isoforms of heparan sulfate D-glucosaminyl 3-O-sulfotransferase. Isolation, characterization, and expression of human cdnas and identification of distinct genomic loci.

HS3ST4 HS3ST3B1 HS3ST3A1

9.47e-06169139988767
Pubmed

Assignment of a locus for autosomal dominant idiopathic scoliosis (IS) to human chromosome 17p11.

HS3ST3B1 HS3ST3A1

2.03e-05391212384783
Pubmed

Diversity of human copy number variation and multicopy genes.

TBC1D3E TBC1D3G

2.03e-05391221030649
Pubmed

Anti-Hyperuricemic Effect of 2-Hydroxy-4-methoxy-benzophenone-5-sulfonic Acid in Hyperuricemic Mice through XOD.

SLC2A9 XDH

2.03e-05391230336599
Pubmed

A census of human transcription factors: function, expression and evolution.

MYT1L SOX15 ZBTB7A MSC TCF15 TFAP2D KMT2A TCFL5 ZHX1 ZBTB24 ZNF541

2.56e-05908911119274049
Pubmed

Biosynthesis of heparin/heparan sulfate. The D-glucosaminyl 3-O-sulfotransferase reaction: target and inhibitor saccharides.

HS3ST3B1 HS3ST3A1

4.05e-0549127744762
Pubmed

Expression of heparan sulfate D-glucosaminyl 3-O-sulfotransferase isoforms reveals novel substrate specificities.

HS3ST3B1 HS3ST3A1

4.05e-0549129988768
Pubmed

P2 receptor subtypes in the cardiovascular system.

P2RX1 P2RY2

4.05e-0549129841859
Pubmed

Transcriptional repressor ZBTB1 promotes chromatin remodeling and translesion DNA synthesis.

RPS16 MTCL1 RPL3 RPL11

6.25e-058191424657165
Pubmed

Myt1l haploinsufficiency leads to obesity and multifaceted behavioral alterations in mice.

MYT1L MAP2

6.74e-05591235538503
Pubmed

Mutational analysis of genes with ureteric progenitor cell-specific expression in branching morphogenesis of the mouse kidney.

HS3ST3B1 HS3ST3A1

6.74e-05591232017326
Pubmed

GWAS meta-analysis and replication identifies three new susceptibility loci for ovarian cancer.

TBC1D3 SKIDA1 TBC1D3F

8.13e-053291323535730
Pubmed

Diamond-Blackfan anemia: genotype-phenotype correlations in Italian patients with RPL5 and RPL11 mutations.

RPS16 RPL11

1.01e-04691219773262
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

DOCK5 ZNF704 SEMA4D ZBTB7A MAP2 INF2 EXOSC3 RTN4RL1 TPGS1 TEP1 TET3 BRWD3 RPAP2

1.32e-041489911328611215
Pubmed

Folate receptor α increases chemotherapy resistance through stabilizing MDM2 in cooperation with PHB2 that is overcome by MORAb-202 in gastric cancer.

PRSS3 CNTNAP4 RPS16 RPL3 RPL11

2.14e-0420691534185411
Pubmed

Nuclear organization of nucleotide excision repair is mediated by RING1B dependent H2A-ubiquitylation.

RPS16 XPC RPL3 RPL11

2.20e-0411291428416769
Pubmed

A mutant-cell library for systematic analysis of heparan sulfate structure-function relationships.

NDST2 HS3ST4

2.41e-04991230377379
Pubmed

DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.

KMT2A TET3

3.01e-041091229276034
Pubmed

ESCs require PRC2 to direct the successful reprogramming of differentiated cells toward pluripotency.

JARID2 KMT2A

3.01e-041091220569692
Pubmed

Transcriptional mechanisms of EphA7 gene expression in the developing cerebral cortex.

MYT1L EPHA5

3.67e-041191221940705
Pubmed

Loss of alpha-tubulin polyglutamylation in ROSA22 mice is associated with abnormal targeting of KIF1A and modulated synaptic function.

MAP2 TPGS1

3.67e-041191217360631
Pubmed

A MYT1L syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation.

MYT1L MAP2

3.67e-041191234614421
Pubmed

Pro-prion, as a membrane adaptor protein for E3 ligase c-Cbl, facilitates the ubiquitination of IGF-1R, promoting melanoma metastasis.

PPP1R26 ZBTB7A INF2 SHC1 PKP1 MTCL1 RPL11 RPAP2

4.57e-0468991836543142
Pubmed

Neural-specific inactivation of ShcA results in increased embryonic neural progenitor apoptosis and microencephaly.

MAP2 SHC1

5.18e-041391216870734
Pubmed

A mutation in the tuft mouse disrupts TET1 activity and alters the expression of genes that are crucial for neural tube closure.

CECR2 TET3

5.18e-041391226989192
Pubmed

Sohlh1 is essential for spermatogonial differentiation.

TCF15 TCFL5

6.04e-041491216564520
Pubmed

The role of human ribosomal proteins in the maturation of rRNA and ribosome production.

RPS16 RPL11

6.95e-041591218697920
Pubmed

A map of 75 human ribosomal protein genes.

RPS16 RPL3 RPL11

7.35e-04679139582194
Pubmed

Identification of atrogin-1-targeted proteins during the myostatin-induced skeletal muscle wasting.

PRSS3 INF2 SIGLEC9 PKP1

7.51e-0415591422673621
Pubmed

Gene deletion mutants reveal a role for semaphorin receptors of the plexin-B family in mechanisms underlying corticogenesis.

SEMA4D MAP2

7.93e-041691219948886
Pubmed

Deterministic and stochastic allele specific gene expression in single mouse blastomeres.

JARID2 SOX15 TCF15 FBXL20 TEP1 FBXO15

8.83e-0442491621731673
Pubmed

Proteomic analysis of human Nop56p-associated pre-ribosomal ribonucleoprotein complexes. Possible link between Nop56p and the nucleolar protein treacle responsible for Treacher Collins syndrome.

RPS16 RPL3 RPL11

9.07e-047291312777385
Pubmed

FGF signaling activates a Sox9-Sox10 pathway for the formation and branching morphogenesis of mouse ocular glands.

HS3ST3B1 HS3ST3A1

1.01e-031891224924191
Pubmed

Comparative Proteomics and Interactome Analysis of the SARS-CoV-2 Nucleocapsid Protein in Human and Bat Cell Lines.

EXOSC3 RPS16 RPL3 RPL11

1.01e-0316891439066279
Pubmed

Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.

CECR2 KMT2A BRD1

1.02e-037591325593309
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

EXOSC3 PKP1 KMT2A RPS16 MTCL1 RPL3 RPL11

1.03e-0360191733658012
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

ZNF512B PKP1 KMT2A RPS16 BRD1 RPL3 RPL11

1.07e-0360591728977666
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

CRNKL1 RPS16 RPL3 RPL11 RPAP2

1.17e-0330091528561026
Pubmed

Structures of the human and Drosophila 80S ribosome.

RPS16 RPL3 RPL11

1.19e-037991323636399
Pubmed

Structure and evolution of mammalian ribosomal proteins.

RPS16 RPL3 RPL11

1.23e-03809138722009
Pubmed

PSMD9 ribosomal protein network maintains nucleolar architecture and WT p53 levels.

RPS16 RPL11

1.25e-032091234077860
Pubmed

SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay.

RPS16 RPL11

1.25e-032091219417104
Pubmed

Structure of the human 80S ribosome.

RPS16 RPL3 RPL11

1.32e-038291325901680
Pubmed

TSHZ3 deletion causes an autism syndrome and defects in cortical projection neurons.

HS3ST4 HS3ST3B1

1.38e-032191227668656
Pubmed

Chromatin remodeler Arid1a regulates subplate neuron identity and wiring of cortical connectivity.

MAP2 HS3ST4

1.38e-032191234011608
Pubmed

A male germ-cell-specific ribosome controls male fertility.

RPS16 RPL3 RPL11

1.47e-038591336517592
Pubmed

Identification of genes related to Parkinson's disease using expressed sequence tags.

SEMA4D TFAP2D CNTNAP4

1.47e-038591317213182
Pubmed

Sequential genome-wide CRISPR-Cas9 screens identify genes regulating cell-surface expression of tetraspanins.

ZNF512B A1BG HS3ST6 XDH TEP1 RPL3 TCFL5 RPL11

1.54e-0383291836724073
Pubmed

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

ZNF512B C2CD3 KMT2A XPC BRD1 ZBTB24 RPAP2

1.54e-0364591725281560
Pubmed

The molecular mechanics of eukaryotic translation.

RPS16 RPL3 RPL11

1.57e-038791315189156
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

ZNF512B CRNKL1 EXOSC3 KMT2A RPS16 XPC RPL3 RPL11

1.72e-0384791835850772
Pubmed

Identification and developmental analysis of genes expressed by dopaminergic neurons of the substantia nigra pars compacta.

JARID2 KMT2A TET3

1.73e-039091315033168
Pubmed

Dynamic Expression of Genes Involved in Proteoglycan/Glycosaminoglycan Metabolism during Skin Development.

NDST2 HS3ST6 HS3ST3B1

1.73e-039091330228991
Pubmed

ATRX proximal protein associations boast roles beyond histone deposition.

ZNF512B CCDC71 XPC

1.78e-039191334780483
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

ZNF512B DOCK5 ZBTB7A TFAP2D EXOSC3 KMT2A XPC RPL3 TET3 RPL11

2.06e-031294911030804502
Pubmed

Interactomic analysis of REST/NRSF and implications of its functional links with the transcription suppressor TRIM28 during neuronal differentiation.

JARID2 RPS16 RPL3 RPL11

2.10e-0320591427976729
Pubmed

Comparative Interactomes of VRK1 and VRK3 with Their Distinct Roles in the Cell Cycle of Liver Cancer.

JARID2 RPS16 RPL3 RPL11

2.10e-0320591428927264
Pubmed

Directed proteomic analysis of the human nucleolus.

EXOSC3 RPS16 RPL3 RPL11

2.21e-0320891411790298
Pubmed

Replication of a genome-wide case-control study of esophageal squamous cell carcinoma.

XDH MTCL1

2.28e-032791218649358
Pubmed

New interaction partners for Nek4.1 and Nek4.2 isoforms: from the DNA damage response to RNA splicing.

DOCK5 ASXL3 ZGRF1 RPS16 RPL3 RPL11

2.32e-0351391625798074
Pubmed

Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

ASXL3 CECR2 CNTNAP4

2.47e-0310291311214970
Pubmed

SARS-CoV-2 spike protein induces endothelial inflammation via ACE2 independently of viral replication.

PRSS3 RPS16 RPL3 RPL11

2.54e-0321691437640791
Pubmed

NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.

ZNF512B CRNKL1 KMT2A

2.54e-0310391332744500
CytobandEnsembl 112 genes in cytogenetic band chr17q12

TBC1D3E TBC1D3 TBC1D3H TBC1D3L TBC1D3D FBXL20 TBC1D3I TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

2.20e-161499112chr17q12
Cytoband17q12

TBC1D3 TBC1D3H FBXL20 TBC1D3C TBC1D3B TBC1D3F

4.96e-089991617q12
GeneFamilySulfotransferases, membrane bound

NDST2 HS3ST6 HS3ST4 HS3ST3B1 HS3ST3A1

7.97e-0837545763
GeneFamilyZinc fingers CXXC-type

KMT2A TET3

5.67e-0412542136
CoexpressionAtlasMesoderm Day 15_vs_Mesoderm Day 30-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

1.56e-1090909PCBC_ratio_MESO-15_vs_MESO-30_cfr-2X-p05
CoexpressionAtlasEndoderm Differentiated Cells-method_mRNA_vs_Endoderm Differentiated Cells-method_NA-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3L TBC1D3D RTN4RL1 TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

2.38e-082139010PCBC_ratio_DE_from-mRNA_vs_DE_from-ESC_cfr-2X-p05
CoexpressionAtlasEndoderm Differentiated Cells-reprogram_OSKM-L_vs_Endoderm Differentiated Cells-reprogram_NA-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3L TBC1D3D RTN4RL1 TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

2.38e-082139010PCBC_ratio_DE_from-OSKM-L_vs_DE_from-ESC_cfr-2X-p05
CoexpressionAtlasDE cord blood_vs_DE blastocyst-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3L TBC1D3D RTN4RL1 TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

7.91e-082429010PCBC_ratio_DE cord blood_vs_DE blastocyst_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5-reprogram_OSKM-L_vs_Mesoderm Day 5-reprogram_NA-Confounder_removed-fold2.0_adjp0.05

FLNC TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

3.16e-072819010PCBC_ratio_MESO-5_from-OSKM-L_vs_MESO-5_from-ESC_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5-method_mRNA_vs_Mesoderm Day 5-method_NA-Confounder_removed-fold2.0_adjp0.05

FLNC TBC1D3 TBC1D3H TBC1D3L TBC1D3D TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

3.16e-072819010PCBC_ratio_MESO-5_from-mRNA_vs_MESO-5_from-ESC_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5_vs_Endoderm Differentiated Cells-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3L TBC1D3D RTN4RL1 TBC1D3G TBC1D3C TBC1D3B TBC1D3K TBC1D3F

1.03e-063209010PCBC_ratio_MESO-5_vs_DE_cfr-2X-p05
ToppCellCV-Severe-5|Severe / Virus stimulation, Condition and Cluster

A1BG ZNF704 INF2 RPS16 RPL3 RPL11

2.67e-06191916d04f93fc85c882260ca4d5b4768504fbf8a47984
ToppCellLPS-antiTNF-Stromal_mesenchymal-Fibroblasts-Monocytes-Macrophages|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZNF512B ASXL3 CNTNAP4 HS3ST3A1 ZHX1

1.47e-05151915f13a117ae26ae525da4f3e837d8f204d00dc6ee3
ToppCell3'-Distal_airway-Immune_Myeloid-Myeloid_monocytic-non-classical_monocyte-Non-classical_monocytes-Non-classical_monocytes_L.1.2.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SLC39A12 P2RX1 RTN4RL1 CXCL11 KIAA1614

1.94e-05160915709ce00699ca05346287868ea55a1affae0859a8
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Lymphocytic-unknown|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZGRF1 C2orf42 XPC MTCL1 HS3ST3B1

2.25e-05165915475905d608fac628960188ae4a18010b8097417e
ToppCelldroplet-Pancreas-Exocrine-24m-Epithelial-pancreatic_acinar_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRSS3 P2RX1 CECR2 FIGN EPHA5

2.25e-05165915622aca1d49bd8c917b131e4f4959d9dba411d22b
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_acinar_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SOX15 PRSS3 P2RX1 HS3ST3B1 RPL3

3.07e-0517691560740f676db5d259ef3046bd5bc7b7b14924ecee
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-nan|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRSS3 P2RX1 RPS16 RPL3 RPL11

3.07e-0517691512bccbd56742fcfe19749da802ea1cf62ec9a872
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_acinar_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRSS3 P2RX1 RPS16 RPL3 RPL11

3.24e-05178915415a02ad14df9deba988990118b00fb84ee524a8
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRSS3 P2RX1 RPS16 RPL3 RPL11

3.50e-05181915cf8f7798559fedf91ee21b3ebc93171cfd14f89f
ToppCelldroplet-Pancreas-PANCREAS|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRSS3 P2RX1 RPS16 RPL3 RPL11

3.60e-05182915ecb8c1d0b9e0766fae4dd2568456eb78a3cfce9a
ToppCelldroplet-Pancreas-PANCREAS-30m|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRSS3 P2RX1 RPS16 RPL3 RPL11

3.60e-05182915cf1ccfc4709364763fa73e60d5f2c05ce268d5c1
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Renal_corpuscle_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK5 MAP2 INF2 HS3ST3B1 HS3ST3A1

3.69e-05183915848fc6dd129150897ee339343e83c645b6e779eb
ToppCellMesenchymal_cells-Myofibroblasts|Mesenchymal_cells / Lineage and Cell class

FLNC MSC RPS16 RPL3 RPL11

4.31e-05189915f5322429963257cfd3fd813d7b7d273d3d12d622
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_1-Endothelial_Tip.Dcn.Nnat_(Nnat)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

SLC2A9 HS3ST6 HS3ST3B1 HS3ST3A1

4.33e-05959143699ea16660a22ea79fecfea56ece2dfb0f13467
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_1|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

SLC2A9 HS3ST6 HS3ST3B1 HS3ST3A1

4.33e-0595914cbfe615d880913bafaf5e7e8d24c3ec14a9351ce
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_1-Endothelial_Tip.Dcn.Nnat_(Nnat)-|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

SLC2A9 HS3ST6 HS3ST3B1 HS3ST3A1

4.33e-059591427ac23b87747434a3084cc087e7b884e68f0eab9
ToppCellNon-neuronal-Postmitotic-Red_blood_cells-Low_Quality|World / Primary Cells by Cluster

MYT1L TFAP2D RPS16 RPL3 RPL11

4.41e-0519091531cf1367db5c04242621f7c98a10d094bc519e31
ToppCellNon-neuronal-Postmitotic-Red_blood_cells|World / Primary Cells by Cluster

MYT1L TFAP2D RPS16 RPL3 RPL11

4.41e-05190915f0b82334375749d917e440c493f10340c52ea13c
ToppCellNon-neuronal-Postmitotic-Red_blood_cells-Low_Quality-14|World / Primary Cells by Cluster

MYT1L TFAP2D RPS16 RPL3 RPL11

4.41e-05190915feadd834d843f952aa7ced93899fd1f0868743df
ToppCelldroplet-Limb_Muscle-nan-3m-Mesenchymal-skeletal_muscle_satellite_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FLNC MSC RPS16 RPL3 RPL11

4.53e-051919154fcbc214853e115608b3be7b35639247ae41c9dc
ToppCellCV-Severe-5|CV / Virus stimulation, Condition and Cluster

A1BG ZNF704 INF2 RPL3 RPL11

4.76e-05193915d87fcd4553b6198c3128685b73ffd1b1ae88fbb5
ToppCelldroplet-Bladder-Unstain-18m-Epithelial-basal_bladder_epithelial_cell_(Krt5+Krt14+)|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PKP1 RPS16 MTCL1 RPL3 RPL11

4.99e-05195915f7a4ce7076148389471678bcc5349df8b72b653e
ToppCell(01)_IL1RL1+-(1)_GFP|(01)_IL1RL1+ / shred by cell type by condition

PRSS3 P2RY2 SHC1 PKP1 RPL3

5.12e-05196915b598b1112242534e139318012b257ed3cb09da83
ToppCell(2)_NK/T-(22)_CD8+_T_cell-(221)_CD8+_Naive_T_cell|(22)_CD8+_T_cell / immune cells in Peripheral Blood (logTPM normalization)

A1BG INF2 RPS16 RPL3 RPL11

5.24e-05197915ac77bcd7548db40147bf55dbf0ce86ed0b6a86da
ToppCellhealthy_donor-Lymphocytic-T_cell|healthy_donor / Disease condition, Lineage, Cell class and subclass

CDR2 KMT2A RPS16 RPL3 RPL11

5.24e-0519791563d0f06e150e7eb800ecb70e97b9d12a01c84e37
ToppCelldroplet-Limb_Muscle-nan-18m-Mesenchymal-skeletal_muscle_satellite_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FLNC MSC RPS16 RPL3 RPL11

5.24e-05197915e5ab45cfe4ebd02ca25029d87bece70dfbb4adc4
ToppCellCOVID_vent-Lymphocytic-T_cell-CD4+_Memory_T_cell|COVID_vent / Disease condition, Lineage, Cell class and subclass

CDR2 KMT2A RPS16 RPL3 RPL11

5.37e-0519891558f208b76cb0adcecdf632d92f92833a06f9bf71
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Newborn-35|World / Primary Cells by Cluster

MYT1L ZNF704 MAP2 KMT2A EPHA5

5.37e-05198915de5214a85fe017eb23d4aa8af624464f062ec57e
ToppCell(00)_Basal|World / shred by cell type by condition

SOX15 PRSS3 PKP1 RPL3 RPL11

5.50e-05199915bc0201e77a1690e3e0a6ecd05cd105e1f5c0ba7b
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Neuronal-Interneuron|10w / Sample Type, Dataset, Time_group, and Cell type.

MYT1L MAP2 ASXL3 CNTNAP4 EPHA5

5.63e-05200915f5c63ef52bd7a898cf009b8bf9b2f7f4890d1c9b
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Neuronal|GW26 / Sample Type, Dataset, Time_group, and Cell type.

MYT1L MAP2 ASXL3 RPL11 EPHA5

5.63e-05200915306926cb7a847871641f02e03d52dc56fd55711c
ToppCellParenchymal-10x5prime-Stromal-Peri/Epineurial_|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

ZNF512B SOX15 MAP2 TCFL5 KIAA1614

5.63e-052009154c3c11dd5e71ebc3d62264eeaeb71a850b149779
Diseasehyperuricemia (implicated_via_orthology)

SLC2A9 XDH

1.55e-047812DOID:1920 (implicated_via_orthology)
DiseaseHyperuricemia

SLC2A9 XDH

1.55e-047812C0740394
DiseaseGout

SLC2A9 XDH

2.65e-049812C0018099
Diseasediastolic blood pressure, alcohol drinking

SLC39A12 C1orf167 FIGN FBXO15

3.19e-04118814EFO_0004329, EFO_0006336
Diseaseglomerulosclerosis (implicated_via_orthology)

INF2 SHC1

4.03e-0411812DOID:0050851 (implicated_via_orthology)
DiseaseMacrocephaly

TET3 BRWD3

4.03e-0411812C0221355
DiseaseAutosome Abnormalities

KMT2A XPC

8.71e-0416812C0004403
DiseaseChromosome Aberrations

KMT2A XPC

8.71e-0416812C0008625
Diseaseparahippocampal gyrus volume measurement

TFAP2D XDH

1.11e-0318812EFO_0010318
Diseasemortality

MYT1L TFAP2D HS3ST3B1 RPL3

1.34e-03173814EFO_0004352
DiseaseCCL4 measurement

TBC1D3 TBC1D3F

1.37e-0320812EFO_0004751
DiseaseAutism Spectrum Disorders

MYT1L JARID2 TET3

1.67e-0385813C1510586
Diseaseepiandrosterone sulfate measurement

ZBTB7A PRSS3

2.14e-0325812EFO_0021120
DiseaseNeurodevelopmental Disorders

MYT1L ASXL3 KMT2A

2.16e-0393813C1535926
DiseaseAcute monocytic leukemia

FANCE KMT2A

2.32e-0326812C0023465

Protein segments in the cluster

PeptideGeneStartEntry
DLGKATLRGIRKCPR

C2orf42

16

Q9NWW7
PKCGRGKPALVRRHT

BRD1

871

O95696
LQCSLGGRRKPRGTA

C1orf167

1231

Q5SNV9
FGEVCSGRLKLPGKR

EPHA5

686

P54756
GKLCRNGGKCRERPI

CNTNAP4

966

Q9C0A0
PGTSSGRKVKCRGRR

BRWD3

1281

Q6RI45
LGSSGSEKLLCPRGR

CECR2

1091

Q9BXF3
ALKRVPGAGSSGCRL

ASXL3

1726

Q9C0F0
GILRRAKSKNGGRCL

TFAP2D

251

Q7Z6R9
KGKCARRTPIRAPSG

RTN4RL1

401

Q86UN2
RLSRRSGGVPGAKDK

MTCL1

96

Q9Y4B5
PGLKTTAVCRGVLRG

A1BG

131

P04217
GPRGTGKTLLGRCIA

FIGN

526

Q5HY92
AAALRRLRCPKGRGK

OR10AC1

226

Q8NH08
RLRCPKGRGKAASTC

OR10AC1

231

Q8NH08
EGSSRPHCLGKTKGR

HS3ST3B1

341

Q9Y662
RRGGLGCSPASIKRK

MAGEA11

6

P43364
VRRCKIAGRGRAPLG

MYCNOS

71

P40205
PRCVLLGKRKGSVGA

NUDT15

26

Q9NV35
SSPKKPQCRRGKAGR

KIAA1614

111

Q5VZ46
TDCGPMGRRLKGARR

FAM214B

301

Q7L5A3
ACRASGRGLQPKGVR

FLNC

476

Q14315
EGSSRPHCLGKTKGR

HS3ST3A1

356

Q9Y663
GTSGGLPRAKRKSVR

P2RY2

231

P41231
TLPRARGRASKGTGK

INF2

1206

Q27J81
RGRGRPKGSAKARTT

CCDC71

361

Q8IV32
LARRALGTSIGKCPK

CRNKL1

591

Q9BZJ0
GSRGRKKRGLSDISP

C2CD3

11

Q4AC94
GKKHTCGLRRPFGVA

DOCK5

311

Q9H7D0
LKSSGQGRRSPGKCD

CDR2

136

Q01850
GRARAFGCRKGPGVK

FBXO15

31

Q8NCQ5
RSRKGGIEGGAKLCS

C7orf25

26

Q9BPX7
RGPPGRKSECRASKH

GPR37L1

336

O60883
GLQKELSLPRRGRGC

MAST3

11

O60307
CDHLRSGVPGGRRRK

SLC2A9

36

Q9NRM0
VKKGRRSRRCGQCPG

KMT2A

1146

Q03164
RKGARIGKLCDCPRG

CARTPT

91

Q16568
SLCRGLGLGGRRLKS

FANCE

166

Q9HB96
EVGLRAPRCSCGKRK

LINC01554

81

Q52M75
MGGCPVRKRRRNGSK

FAM104B

1

Q5XKR9
TKNPSKRLGCRGEGA

GRK4

426

P32298
KKSAPCRAGSGRRSR

CROCCP3

216

Q8IVE0
KTLLEKTGCPRRRNG

SLC39A12

66

Q504Y0
TKCGRLRHKEPGSGS

EXOSC3

81

Q9NQT5
KRGRCLCIGPGVKAV

CXCL11

26

O14625
PRCLGKSKGRTHPRI

HS3ST4

406

Q9Y661
KAQGGSRPRCLGKSK

HS3ST6

291

Q96QI5
GRLNPKSCTKEVGGR

JARID2

411

Q92833
GCTPGKAKRKAQGIR

P2RX1

131

P51575
CDPRGTLRKGTLGSK

PKP1

161

Q13835
GRKGAAGLRKRPACD

RNF113B

26

Q8IZP6
PRKTHRGLRKVACIG

RPL3

241

P39023
SKRCGGFLRKLSLRG

FBXL20

86

Q96IG2
AGGPGSLSYRCKRKR

SKIDA1

261

Q1XH10
RCESKKFGGPGARAR

RPS16

126

P62249
RSCRKKSARPAAGVG

SIGLEC9

371

Q9Y336
GCKRKRRGGGHVRPS

PPP1R26

591

Q5T8A7
PRIARVCKGDQGGLR

SEMA4D

251

Q92854
SRGGKTLCKGDRQAP

TBC1D3L

376

B9A6J9
RPVPASRGRKTLCKG

TBC1D3B

371

A6NDS4
SRGRKTLCKGDRQAP

TBC1D3B

376

A6NDS4
SRGGKTLCKGDRQAP

TBC1D3H

376

P0C7X1
LGGSCLKVRGVAPLR

TCF15

181

Q12870
RRKAKSSGAGPSRCG

SOX15

121

O60248
LRTAAKRCYGKRPGL

TEP1

1496

Q99973
RPGFSIADKKRRTGC

RPL11

136

P62913
SRGGKTLCKGDRQAP

TBC1D3F

376

A6NER0
GRKAGAPRCSRKAAG

RPAP2

11

Q8IXW5
GLSSLRKRGRGRPKG

ZHX1

736

Q9UKY1
EGGKTRCLGRSKGRR

NDST2

821

P52849
KLGPALTRKVSCARG

SASH1

1076

O94885
RRKLGLSGTKLGCGE

XDH

31

P47989
SRGGKTLCKGDRQAP

TBC1D3E

376

A0A087X179
GGGDGRKKRKRCGTC

TET3

46

O43151
SKCGSLKNIRHRPGG

MAP2

1706

P11137
GTVSLRKPRGEGKKC

ZNF704

371

Q6ZNC4
HGSAKRICGRRKRPG

ZBTB24

276

O43167
GRAVKCGKGLAAARP

PRSS3

16

P35030
CRDKGARGSTGRKVG

ZNF512B

871

Q96KM6
SGRSLGCQPSGLKRK

ZGRF1

101

Q86YA3
TGLKKACSGTPARPR

ZNF474

206

Q6S9Z5
SRGGKTLCKGDRQAP

TBC1D3D

376

A0A087WVF3
TCRPSAKGKRNKGGR

XPC

376

Q01831
SRGGKTLCKGDRQAP

TBC1D3G

376

Q6DHY5
SRGGKTLCKGDRQAP

TBC1D3

376

Q8IZP1
CLSAGGRRKRPGLDG

TPGS1

126

Q6ZTW0
FCGKTGRRLKLTRPD

TCFL5

466

Q9UL49
GAKGATRRRKPCSRP

SHC1

201

P29353
SRGGKTLCKGDRQAP

TBC1D3K

376

A0A087X1G2
DGCLLKQGPRGRRLS

nan

251

Q8N7P7
KKDGCNGVPSRRGRK

ZBTB7A

486

O95365
SRGGKTLCKGDRQAP

TBC1D3I

376

A0A087WXS9
SRGGKTLCKGDRQAP

TBC1D3C

376

Q6IPX1
SRITKGEKGPACSRG

ZNF541

726

Q9H0D2
LGTAGSAEGCKRKRP

MSC

61

O60682
SAEGCKRKRPRVAGG

MSC

66

O60682
LSGCPRAKKSGIRIA

MYT1L

926

Q9UL68