Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionmRNA binding

TRA2B LUC7L LUC7L2 SRSF4

8.05e-04694134GO:0003729
GeneOntologyBiologicalProcessmRNA splicing, via spliceosome

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

4.06e-08358136GO:0000398
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions with bulged adenosine as nucleophile

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

4.06e-08358136GO:0000377
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

4.34e-08362136GO:0000375
GeneOntologyBiologicalProcessRNA splicing

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

2.99e-07502136GO:0008380
GeneOntologyBiologicalProcessmRNA processing

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

5.17e-07551136GO:0006397
GeneOntologyBiologicalProcessmRNA metabolic process

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

9.96e-06917136GO:0016071
GeneOntologyBiologicalProcessregulation of mRNA splicing, via spliceosome

TRA2B TRA2A SRSF4

6.53e-05129133GO:0048024
GeneOntologyBiologicalProcessregulation of mRNA processing

TRA2B TRA2A SRSF4

1.19e-04158133GO:0050684
GeneOntologyBiologicalProcessembryonic brain development

TRA2B PRICKLE1

1.47e-0429132GO:1990403
GeneOntologyBiologicalProcessRNA processing

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

1.61e-041500136GO:0006396
GeneOntologyBiologicalProcessnegative regulation of stem cell differentiation

PRICKLE1 CDK13

1.91e-0433132GO:2000737
GeneOntologyBiologicalProcessregulation of RNA splicing

TRA2B TRA2A SRSF4

2.65e-04207133GO:0043484
GeneOntologyBiologicalProcesspositive regulation of mRNA splicing, via spliceosome

TRA2B TRA2A

3.42e-0444132GO:0048026
GeneOntologyBiologicalProcesspositive regulation of mRNA processing

TRA2B TRA2A

4.24e-0449132GO:0050685
GeneOntologyBiologicalProcessmRNA splice site recognition

LUC7L LUC7L2

4.78e-0452132GO:0006376
GeneOntologyBiologicalProcesspositive regulation of RNA splicing

TRA2B TRA2A

7.01e-0463132GO:0033120
GeneOntologyBiologicalProcessalternative mRNA splicing, via spliceosome

TRA2B CDK13

1.10e-0379132GO:0000380
GeneOntologyBiologicalProcessregulation of stem cell differentiation

PRICKLE1 CDK13

1.72e-0399132GO:2000736
GeneOntologyBiologicalProcessspliceosomal complex assembly

LUC7L LUC7L2

1.72e-0399132GO:0000245
GeneOntologyBiologicalProcessregulation of mRNA metabolic process

TRA2B TRA2A SRSF4

2.40e-03443133GO:1903311
GeneOntologyCellularComponentspliceosomal complex

TRA2B TRA2A LUC7L LUC7L2

7.23e-06215134GO:0005681
GeneOntologyCellularComponentU2-type prespliceosome

LUC7L LUC7L2

5.43e-0518132GO:0071004
GeneOntologyCellularComponentprespliceosome

LUC7L LUC7L2

5.43e-0518132GO:0071010
GeneOntologyCellularComponentnuclear speck

RBBP6 CDK13 LUC7L2 SRSF4

1.10e-04431134GO:0016607
GeneOntologyCellularComponentU1 snRNP

LUC7L LUC7L2

1.86e-0433132GO:0005685
GeneOntologyCellularComponentribonucleoprotein complex

TRA2B TRA2A LUC7L LUC7L2 SRSF4

5.27e-041194135GO:1990904
GeneOntologyCellularComponentnuclear protein-containing complex

TRA2B TRA2A LUC7L CDK13 LUC7L2

1.01e-031377135GO:0140513
GeneOntologyCellularComponentspliceosomal snRNP complex

LUC7L LUC7L2

1.58e-0396132GO:0097525
GeneOntologyCellularComponentU2-type spliceosomal complex

LUC7L LUC7L2

1.61e-0397132GO:0005684
GeneOntologyCellularComponentnuclear body

RBBP6 CDK13 LUC7L2 SRSF4

1.81e-03903134GO:0016604
GeneOntologyCellularComponentsmall nuclear ribonucleoprotein complex

LUC7L LUC7L2

1.95e-03107132GO:0030532
GeneOntologyCellularComponentSm-like protein family complex

LUC7L LUC7L2

2.41e-03119132GO:0120114
DomainLuc7-rel

LUC7L LUC7L2

1.34e-063132IPR004882
DomainLUC7

LUC7L LUC7L2

1.34e-063132PF03194
DomainRRM_1

TRA2B TRA2A SRSF4

3.59e-04208133PF00076
DomainRRM

TRA2B TRA2A SRSF4

4.06e-04217133SM00360
DomainRRM_dom

TRA2B TRA2A SRSF4

4.63e-04227133IPR000504
DomainRRM

TRA2B TRA2A SRSF4

4.81e-04230133PS50102
Domain-

TRA2B TRA2A SRSF4

5.72e-042441333.30.70.330
DomainNucleotide-bd_a/b_plait

TRA2B TRA2A SRSF4

6.73e-04258133IPR012677
PathwayKEGG_SPLICEOSOME

TRA2B TRA2A SRSF4

5.77e-0512793M2044
PathwayREACTOME_RHOBTB1_GTPASE_CYCLE

TRA2B RBBP6

9.10e-052392M41817
PathwayREACTOME_RHOBTB1_GTPASE_CYCLE

TRA2B RBBP6

1.08e-042592MM15608
PathwayREACTOME_RHOBTB_GTPASE_CYCLE

TRA2B RBBP6

2.13e-043592M41738
PathwayREACTOME_RHOBTB_GTPASE_CYCLE

TRA2B RBBP6

2.39e-043792MM15683
PathwayWP_MRNA_PROCESSING

TRA2B RSRC2 SRSF4

2.37e-0345193MM15946
PathwayWP_MRNA_PROCESSING

TRA2B SRSF4

2.74e-0312692M39406
Pubmed

The protein interaction landscape of the human CMGC kinase group.

TRA2B TRA2A RBBP6 LUC7L CDK13 LUC7L2 GPATCH8 RSRC2 SRSF4

3.21e-1369513923602568
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

TRA2B TRA2A RBBP6 LUC7L NKTR GPATCH8 RSRC2 SRSF4

3.53e-1171313829802200
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

TRA2B TRA2A RBBP6 LUC7L CDK13 LUC7L2 NKTR GPATCH8 SRSF4

8.31e-11129413930804502
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

TRA2B TRA2A RBBP6 CDK13 LUC7L2 GPATCH8 RSRC2 SRSF4

9.43e-1180713822681889
Pubmed

SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

TRA2B TRA2A CDK13 LUC7L2 NKTR SRSF4

2.64e-1025913630404004
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

TRA2B TRA2A RBBP6 LUC7L LUC7L2 GPATCH8 RSRC2 SRSF4

9.58e-10108213838697112
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

TRA2B TRA2A RBBP6 LUC7L LUC7L2 RSRC2 SRSF4

2.71e-0973113729298432
Pubmed

Human RNPS1 and its associated factors: a versatile alternative pre-mRNA splicing regulator in vivo.

TRA2B NKTR GPATCH8

6.72e-091113314729963
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

TRA2B TRA2A RBBP6 LUC7L SRSF4

2.31e-0825113531076518
Pubmed

The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.

TRA2A LUC7L LUC7L2 SRSF4

5.28e-0810413431365120
Pubmed

ATAC and Mediator coactivators form a stable complex and regulate a set of non-coding RNA genes.

TRA2B TRA2A LUC7L SRSF4

5.93e-0810713420508642
Pubmed

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.

TRA2B RBBP6 LUC7L CDK13 LUC7L2 GPATCH8

7.31e-0866513630457570
Pubmed

Charting the landscape of tandem BRCT domain-mediated protein interactions.

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

7.65e-0867013622990118
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

TRA2B RBBP6 LUC7L CDK13 LUC7L2 SRSF4

8.20e-0867813630209976
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

TRA2B TRA2A LUC7L NKTR SRSF4

9.02e-0833013533301849
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

TRA2B RBBP6 LUC7L CDK13 LUC7L2 SRSF4

1.20e-0772313634133714
Pubmed

Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing.

TRA2B TRA2A

1.29e-0721329546399
Pubmed

Differential Effects of Tra2ß Isoforms on HIV-1 RNA Processing and Expression.

TRA2B TRA2A

1.29e-07213225970345
Pubmed

TRA2A Promoted Paclitaxel Resistance and Tumor Progression in Triple-Negative Breast Cancers via Regulating Alternative Splicing.

TRA2A RSRC2

1.29e-07213228416606
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

TRA2B TRA2A RBBP6 LUC7L CDK13

1.41e-0736113526167880
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR SRSF4

1.55e-07131813730463901
Pubmed

A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

TRA2B PRICKLE1 CDK13 GPATCH8 RSRC2

2.98e-0742013528065597
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

TRA2B TRA2A RBBP6 LUC7L LUC7L2 SRSF4

3.04e-0784713635850772
Pubmed

Functional analyses of human LUC7-like proteins involved in splicing regulation and myeloid neoplasms.

LUC7L LUC7L2

3.87e-07313233852859
Pubmed

Tra2-mediated recognition of HIV-1 5' splice site D3 as a key factor in the processing of vpr mRNA.

TRA2B TRA2A

3.87e-07313223255807
Pubmed

Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2β in development.

TRA2B TRA2A

3.87e-07313222194695
Pubmed

Dynamic protein-protein interaction wiring of the human spliceosome.

TRA2B TRA2A LUC7L SRSF4

6.86e-0719713422365833
Pubmed

The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.

TRA2B TRA2A LUC7L2 SRSF4

7.73e-0720313435012549
Pubmed

Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock.

TRA2B TRA2A

7.74e-07413214765198
Pubmed

The Brd4 extraterminal domain confers transcription activation independent of pTEFb by recruiting multiple proteins, including NSD3.

LUC7L LUC7L2 RSRC2

1.18e-065713321555454
Pubmed

Angulin proteins ILDR1 and ILDR2 regulate alternative pre-mRNA splicing through binding to splicing factors TRA2A, TRA2B, or SRSF1.

TRA2B TRA2A

1.29e-06513228785060
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

TRA2B TRA2A GPATCH8 SRSF4

1.61e-0624413429884807
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

TRA2B TRA2A RBBP6 LUC7L SRSF4

2.61e-0665313533742100
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

TRA2B RBBP6 LUC7L CDK13 LUC7L2

2.65e-0665513535819319
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

TRA2B RBBP6 LUC7L LUC7L2 RSRC2 SRSF4

2.90e-06124713627684187
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

LUC7L LUC7L2 GPATCH8 SRSF4

3.65e-0630013428561026
Pubmed

Proteomic analysis of steady-state nuclear hormone receptor coactivator complexes.

TRA2B RBBP6 LUC7L2

3.96e-068513316051665
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

TRA2A LUC7L CDK13 LUC7L2 NKTR RSRC2

5.02e-06137113636244648
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

8.29e-06149613632877691
Pubmed

Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.

TRA2B TRA2A RBBP6 GPATCH8

1.44e-0542513424999758
Pubmed

RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity.

TRA2B LUC7L LUC7L2 SRSF4

1.44e-0542513421081503
Pubmed

Neuronal-specific deficiency of the splicing factor Tra2b causes apoptosis in neurogenic areas of the developing mouse brain.

TRA2B TRA2A

1.54e-051613224586484
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

TRA2B RBBP6 LUC7L CDK13 LUC7L2

1.61e-0594913536574265
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

TRA2B TRA2A RBBP6 CDK13 GPATCH8

2.21e-05101413532416067
Pubmed

High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.

TRA2B TRA2A LUC7L LUC7L2 SRSF4

2.28e-05102113526760575
Pubmed

Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.

LUC7L LUC7L2 GPATCH8 SRSF4

2.44e-0548613430940648
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

TRA2B TRA2A RBBP6 CDK13

2.79e-0550313416964243
Pubmed

The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.

TRA2B TRA2A SRSF4

3.11e-0516913323084401
Pubmed

Enhancer Activity Requires CBP/P300 Bromodomain-Dependent Histone H3K27 Acetylation.

TRA2B LUC7L SRSF4

3.75e-0518013330110629
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

TRA2B TRA2A LUC7L CDK13 SRSF4

4.09e-05115313529845934
Pubmed

Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.

TRA2B TRA2A NKTR

4.27e-0518813329721183
Pubmed

Folate receptor α increases chemotherapy resistance through stabilizing MDM2 in cooperation with PHB2 that is overcome by MORAb-202 in gastric cancer.

RBBP6 LUC7L LUC7L2

5.61e-0520613334185411
Pubmed

Large-scale mapping of human protein-protein interactions by mass spectrometry.

TRA2B LUC7L LUC7L2 GPATCH8 SRSF4

6.84e-05128413517353931
Pubmed

The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.

TRA2B TRA2A SRSF4

8.71e-0523913326641092
Pubmed

Lysine acetylation targets protein complexes and co-regulates major cellular functions.

TRA2B SRSF4

9.00e-053813219608861
Pubmed

FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.

TRA2A LUC7L LUC7L2

9.72e-0524813327926873
Pubmed

ATG5 is required for B cell polarization and presentation of particulate antigens.

TRA2A RBBP6 NKTR GPATCH8

1.01e-0470113430196744
Pubmed

A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis.

TRA2B TRA2A RBBP6

1.04e-0425413328431233
Pubmed

Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization.

TRA2B TRA2A LUC7L2

1.06e-0425513315324660
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

TRA2B TRA2A GPATCH8 SRSF4

1.09e-0471413428302793
Pubmed

Insights into the ubiquitin-proteasome system of human embryonic stem cells.

LUC7L LUC7L2 SRSF4

1.24e-0426913329511261
Pubmed

Regulation of alternative splicing by SRrp86 and its interacting proteins.

TRA2B SRSF4

2.03e-045713214559993
Pubmed

Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system.

TRA2B TRA2A

2.26e-046013229055695
Pubmed

ARIH2 Is a Vif-Dependent Regulator of CUL5-Mediated APOBEC3G Degradation in HIV Infection.

TRA2B LUC7L LUC7L2

2.38e-0433613331253590
Pubmed

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

TRA2B TRA2A SRSF4

2.61e-0434713316033648
Pubmed

SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.

TRA2B TRA2A SRSF4

2.75e-0435313327545878
Pubmed

TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions.

TRA2B TRA2A RBBP6 SRSF4

2.90e-0492213427609421
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

TRA2B TRA2A SRSF4

2.94e-0436113330344098
Pubmed

A systematic screen for CDK4/6 substrates links FOXM1 phosphorylation to senescence suppression in cancer cells.

TRA2B TRA2A

3.34e-047313222094256
Pubmed

A protein interaction network links GIT1, an enhancer of huntingtin aggregation, to Huntington's disease.

LUC7L LUC7L2

3.52e-047513215383276
InteractionCLK2 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR GPATCH8 SRSF4

8.21e-14195138int:CLK2
InteractionSRPK2 interactions

TRA2B TRA2A RBBP6 LUC7L CDK13 LUC7L2 NKTR GPATCH8 RSRC2 SRSF4

7.93e-137171310int:SRPK2
InteractionSRSF6 interactions

TRA2B TRA2A RBBP6 LUC7L CDK13 LUC7L2 NKTR GPATCH8 SRSF4

2.29e-12503139int:SRSF6
InteractionCLK3 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 GPATCH8 SRSF4

2.73e-11220137int:CLK3
InteractionRNPS1 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR GPATCH8 SRSF4

4.30e-11425138int:RNPS1
InteractionLUC7L interactions

TRA2A RBBP6 LUC7L LUC7L2 PRM2 NKTR GPATCH8

5.33e-11242137int:LUC7L
InteractionDHX8 interactions

RBBP6 CDK13 LUC7L2 NKTR GPATCH8 RSRC2 SRSF4

1.99e-10292137int:DHX8
InteractionSRSF4 interactions

TRA2B TRA2A RBBP6 CDK13 NKTR GPATCH8 SRSF4

2.40e-10300137int:SRSF4
InteractionSNRNP70 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR GPATCH8 RSRC2 SRSF4

9.11e-10984139int:SNRNP70
InteractionSRSF11 interactions

TRA2B TRA2A LUC7L LUC7L2 GPATCH8 SRSF4

1.57e-09203136int:SRSF11
InteractionSNIP1 interactions

TRA2B TRA2A CDK13 LUC7L2 NKTR GPATCH8 SRSF4

2.38e-09417137int:SNIP1
InteractionSRSF7 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR SRSF4

2.72e-09425137int:SRSF7
InteractionSRSF8 interactions

TRA2B TRA2A LUC7L LUC7L2 SRSF4

3.06e-0998135int:SRSF8
InteractionSNRPC interactions

TRA2B TRA2A RBBP6 LUC7L NKTR GPATCH8 SRSF4

3.46e-09440137int:SNRPC
InteractionMECP2 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR GPATCH8 RSRC2 SRSF4

9.73e-091287139int:MECP2
InteractionZC3H18 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR RSRC2 SRSF4

1.32e-08877138int:ZC3H18
InteractionPNN interactions

TRA2A RBBP6 LUC7L LUC7L2 NKTR SRSF4

1.69e-08302136int:PNN
InteractionBARD1 interactions

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

2.53e-08323136int:BARD1
InteractionTRA2A interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 SRSF4

2.87e-08330136int:TRA2A
InteractionU2AF2 interactions

TRA2B TRA2A LUC7L LUC7L2 NKTR GPATCH8 SRSF4

5.15e-08651137int:U2AF2
InteractionSRPK3 interactions

TRA2A LUC7L CDK13 LUC7L2 SRSF4

8.55e-08190135int:SRPK3
InteractionSRRM2 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 SRSF4

2.10e-07462136int:SRRM2
InteractionDDX23 interactions

RBBP6 CDK13 NKTR GPATCH8 RSRC2 SRSF4

2.63e-07480136int:DDX23
InteractionSNRPA interactions

TRA2B TRA2A RBBP6 LUC7L NKTR SRSF4

2.70e-07482136int:SNRPA
InteractionMYCN interactions

TRA2B TRA2A RBBP6 LUC7L CDK13 LUC7L2 GPATCH8 SRSF4

4.30e-071373138int:MYCN
InteractionSRSF10 interactions

TRA2B TRA2A LUC7L LUC7L2 SRSF4

4.99e-07271135int:SRSF10
InteractionGPATCH8 interactions

LUC7L LUC7L2 GPATCH8 SRSF4

6.91e-07115134int:GPATCH8
InteractionSRSF1 interactions

TRA2B TRA2A LUC7L CDK13 LUC7L2 SRSF4

7.23e-07570136int:SRSF1
InteractionSAP18 interactions

TRA2B TRA2A RBBP6 NKTR GPATCH8

8.95e-07305135int:SAP18
InteractionPPIG interactions

TRA2A RBBP6 LUC7L SRSF4

1.03e-06127134int:PPIG
InteractionSRRM4 interactions

LUC7L LUC7L2 SRSF4

1.61e-0637133int:SRRM4
InteractionRC3H2 interactions

TRA2B RBBP6 LUC7L CDK13 LUC7L2 SRSF4

1.81e-06667136int:RC3H2
InteractionLUC7L2 interactions

TRA2B TRA2A LUC7L LUC7L2 GPATCH8

1.84e-06353135int:LUC7L2
InteractionNKAPD1 interactions

TRA2B TRA2A NKTR SRSF4

2.65e-06161134int:NKAPD1
InteractionRNASEH1 interactions

LUC7L CDK13 NKTR

3.34e-0647133int:RNASEH1
InteractionYTHDC1 interactions

TRA2B PRICKLE1 TRA2A RBBP6 SRSF4

4.16e-06417135int:YTHDC1
InteractionDOT1L interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 SRSF4

5.45e-06807136int:DOT1L
InteractionTHRAP3 interactions

TRA2A RBBP6 LUC7L LUC7L2 SRSF4

5.58e-06443135int:THRAP3
InteractionZBTB2 interactions

TRA2B TRA2A LUC7L NKTR SRSF4

6.03e-06450135int:ZBTB2
InteractionTADA2A interactions

TRA2B TRA2A LUC7L SRSF4

6.03e-06198134int:TADA2A
InteractionRAD18 interactions

TRA2B TRA2A RBBP6 LUC7L SRSF4

6.50e-06457135int:RAD18
InteractionJMJD6 interactions

TRA2B LUC7L LUC7L2 RSRC2

6.92e-06205134int:JMJD6
InteractionSRPK1 interactions

TRA2B LUC7L LUC7L2 RSRC2 SRSF4

8.00e-06477135int:SRPK1
InteractionRBBP6 interactions

TRA2A RBBP6 LUC7L SRSF4

8.51e-06216134int:RBBP6
InteractionCLK1 interactions

TRA2B TRA2A RBBP6 SRSF4

8.98e-06219134int:CLK1
InteractionNR2C2 interactions

TRA2B TRA2A RBBP6 LUC7L LUC7L2 NKTR SRSF4

9.22e-061403137int:NR2C2
InteractionBRD3 interactions

TRA2B TRA2A RBBP6 LUC7L2 RSRC2

9.49e-06494135int:BRD3
InteractionEIF4A3 interactions

TRA2B TRA2A RBBP6 GPATCH8 SRSF4

9.96e-06499135int:EIF4A3
InteractionCEBPB interactions

TRA2B TRA2A LUC7L CDK13 LUC7L2 GPATCH8 SRSF4

1.11e-051443137int:CEBPB
InteractionSRSF3 interactions

TRA2B TRA2A RBBP6 CDK13 SRSF4

1.24e-05522135int:SRSF3
InteractionCPSF6 interactions

TRA2B TRA2A RBBP6 LUC7L2 NKTR

1.29e-05526135int:CPSF6
InteractionATXN1 interactions

TRA2B RBBP6 LUC7L CDK13 LUC7L2 GPATCH8

2.32e-051039136int:ATXN1
InteractionRBM39 interactions

TRA2B TRA2A LUC7L2 NKTR GPATCH8 SRSF4

2.36e-051042136int:RBM39
InteractionNKTR interactions

LUC7L NKTR SRSF4

2.38e-0590133int:NKTR
InteractionPPIE interactions

TRA2B LUC7L LUC7L2 SRSF4

2.43e-05282134int:PPIE
InteractionRBM23 interactions

LUC7L PRM2 SRSF4

2.72e-0594133int:RBM23
InteractionNUP43 interactions

TRA2B RBBP6 LUC7L2 NKTR GPATCH8

2.95e-05625135int:NUP43
InteractionACIN1 interactions

RBBP6 LUC7L LUC7L2 SRSF4

3.14e-05301134int:ACIN1
InteractionMIR19A interactions

TRA2B TRA2A RBBP6

3.27e-05100133int:MIR19A
InteractionMIR19B1 interactions

TRA2B TRA2A RBBP6

3.68e-05104133int:MIR19B1
InteractionGSPT2 interactions

TRA2B TRA2A RBBP6

4.00e-05107133int:GSPT2
InteractionPRP4K interactions

TRA2B LUC7L LUC7L2 SRSF4

4.44e-05329134int:PRP4K
InteractionCHMP4C interactions

TRA2B TRA2A LUC7L RSRC2 SRSF4

4.65e-05687135int:CHMP4C
InteractionRNF113A interactions

TRA2B RBBP6 LUC7L CDK13 LUC7L2

4.81e-05692135int:RNF113A
InteractionSRRM1 interactions

TRA2B TRA2A LUC7L SRSF4

5.52e-05348134int:SRRM1
InteractionMAGEB2 interactions

RBBP6 LUC7L CDK13 NKTR

5.59e-05349134int:MAGEB2
InteractionPAXIP1 interactions

TRA2B TRA2A LUC7L2 SRSF4

6.23e-05359134int:PAXIP1
InteractionSRSF12 interactions

TRA2A LUC7L2 SRSF4

7.15e-05130133int:SRSF12
InteractionNKAP interactions

LUC7L LUC7L2 NKTR

7.49e-05132133int:NKAP
InteractionZNF514 interactions

TRA2B TRA2A

8.01e-0521132int:ZNF514
InteractionTRA2B interactions

TRA2B TRA2A LUC7L2 SRSF4

8.18e-05385134int:TRA2B
InteractionSNRPF interactions

TRA2B TRA2A LUC7L NKTR

8.18e-05385134int:SNRPF
InteractionLARP1B interactions

TRA2A LUC7L2 SRSF4

8.73e-05139133int:LARP1B
InteractionUBE2O interactions

LUC7L CDK13 LUC7L2 PRM2 RSRC2

9.05e-05790135int:UBE2O
InteractionPABPC5 interactions

TRA2B TRA2A RBBP6

9.30e-05142133int:PABPC5
InteractionCASC3 interactions

TRA2A LUC7L LUC7L2

9.30e-05142133int:CASC3
InteractionSNRPD2 interactions

TRA2B LUC7L LUC7L2 NKTR

1.08e-04414134int:SNRPD2
InteractionNCBP3 interactions

TRA2A LUC7L2 SRSF4

1.23e-04156133int:NCBP3
InteractionANTKMT interactions

LUC7L LUC7L2

1.24e-0426132int:ANTKMT
InteractionMEPCE interactions

TRA2B TRA2A LUC7L LUC7L2 SRSF4

1.34e-04859135int:MEPCE
InteractionMKRN1 interactions

TRA2A LUC7L LUC7L2

1.45e-04165133int:MKRN1
InteractionZC3H14 interactions

LUC7L LUC7L2 SRSF4

1.56e-04169133int:ZC3H14
InteractionLARP1 interactions

TRA2A LUC7L LUC7L2 SRSF4

1.70e-04465134int:LARP1
InteractionEWSR1 interactions

TRA2B TRA2A RBBP6 GPATCH8 SRSF4

1.73e-04906135int:EWSR1
InteractionSF3A1 interactions

TRA2B TRA2A RBBP6 LUC7L2

1.78e-04471134int:SF3A1
InteractionSRSF5 interactions

TRA2B TRA2A CDK13 SRSF4

1.83e-04474134int:SRSF5
InteractionIVNS1ABP interactions

TRA2B PRICKLE1 LUC7L2

1.88e-04180133int:IVNS1ABP
InteractionSREK1 interactions

TRA2B LUC7L2 SRSF4

1.97e-04183133int:SREK1
InteractionZRANB2 interactions

TRA2B LUC7L LUC7L2

2.52e-04199133int:ZRANB2
InteractionSNRPB interactions

TRA2B RBBP6 NKTR SRSF4

2.55e-04517134int:SNRPB
InteractionFOXA1 interactions

TRA2B TRA2A LUC7L LUC7L2

2.70e-04525134int:FOXA1
InteractionPRM2 interactions

LUC7L PRM2

2.81e-0439132int:PRM2
InteractionUBR5 interactions

TRA2A LUC7L LUC7L2 SRSF4

2.86e-04533134int:UBR5
InteractionSON interactions

RBBP6 NKTR SRSF4

2.87e-04208133int:SON
InteractionRIOK1 interactions

TRA2B LUC7L LUC7L2 SRSF4

3.50e-04562134int:RIOK1
InteractionPURG interactions

RBBP6 CDK13 NKTR

3.52e-04223133int:PURG
InteractionCLK4 interactions

RBBP6 SRSF4

3.58e-0444132int:CLK4
InteractionFOLR1 interactions

RBBP6 LUC7L LUC7L2

3.71e-04227133int:FOLR1
InteractionCD2BP2 interactions

NKTR GPATCH8 SRSF4

3.96e-04232133int:CD2BP2
InteractionNGRN interactions

TRA2B TRA2A SRSF4

4.11e-04235133int:NGRN
CytobandEnsembl 112 genes in cytogenetic band chr16p13

LUC7L PRM2

6.26e-03426132chr16p13
GeneFamilyRNA binding motif containing

TRA2B TRA2A SRSF4

8.64e-0521383725
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_3DY_DN

TRA2A RBBP6 LUC7L2 NKTR RSRC2

1.37e-06432135M41149
CoexpressionGSE2770_IL12_VS_TGFB_AND_IL12_TREATED_ACT_CD4_TCELL_6H_DN

TRA2B TRA2A CDK13 RSRC2

2.18e-06199134M6060
CoexpressionFAN_OVARY_CL15_SMALL_ANTRAL_FOLLICLE_GRANULOSA_CELL

TRA2B TRA2A RBBP6 LUC7L RSRC2

9.63e-06644135M41717
CoexpressionGSE3039_NKT_CELL_VS_ALPHAALPHA_CD8_TCELL_UP

TRA2A LUC7L RSRC2

1.18e-04200133M6473
CoexpressionGSE23925_LIGHT_ZONE_VS_DARK_ZONE_BCELL_DN

TRA2B LUC7L2 RSRC2

1.18e-04200133M7878
CoexpressionTABULA_MURIS_SENIS_PANCREAS_PANCREATIC_BETA_CELL_AGEING

LUC7L2 NKTR RSRC2

1.41e-04212133MM3816
CoexpressionTHAKAR_PBMC_INACTIVATED_INFLUENZA_AGE_21_30YO_RESPONDERS_7DY_DN

TRA2A LUC7L NKTR SRSF4

2.04e-04634134M40866
CoexpressionTABULA_MURIS_SENIS_LIVER_NK_CELL_AGEING

TRA2B LUC7L2 RSRC2

3.46e-04288133MM3751
CoexpressionBENPORATH_SOX2_TARGETS

TRA2A NKTR RSRC2 SRSF4

3.56e-04734134M3835
CoexpressionPUJANA_ATM_PCC_NETWORK

TRA2B TRA2A RBBP6 CDK13 NKTR

3.80e-041394135M9585
CoexpressionGRAHAM_CML_QUIESCENT_VS_NORMAL_DIVIDING_UP

TRA2B RSRC2

3.82e-0459132M17730
CoexpressionFAN_OVARY_CL5_HEALTHY_SELECTABLE_FOLLICLE_THECAL_CELL

TRA2B RBBP6 RSRC2

4.62e-04318133M41707
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

TRA2B RBBP6 CDK13 GPATCH8 RSRC2

5.20e-041492135M40023
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_3DY_NEGATIVE

LUC7L2 NKTR RSRC2

6.80e-04363133M41103
CoexpressionJOHNSTONE_PARVB_TARGETS_3_DN

TRA2B TRA2A LUC7L2 NKTR

6.99e-04877134M2241
CoexpressionCHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_UP

CDK13 SRSF4

8.11e-0486132M19610
ToppCell10x3'2.3-week_17-19-Lymphocytic_B|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

TRA2B TRA2A CDK13 RSRC2

2.52e-071981345f465cf5c7493e32d9afe9e9d05757d0a95acc33
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

TRA2B TRA2A CDK13 RSRC2

2.52e-0719813477ce3fe1ab161c0faf8987e73a64ab61294b9255
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

TRA2B CDK13 NKTR RSRC2

2.63e-0720013412f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellCOVID-19|World / Disease, condition lineage and cell class

TRA2B RBBP6 CDK13 RSRC2

2.63e-072001347dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCell3'_v3-lymph-node_spleen|World / Manually curated celltypes from each tissue

TRA2B CDK13 NKTR

1.50e-051711337aae88da5b37c20f10118325a048f08906be994c
ToppCellFrontal_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_2-Nptxr-Excitatory_Neuron.Slc17a7.Nptxr-Drd1_(Deep_layer_pyramidal_cells)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

RBBP6 CDK13 LUC7L2

1.64e-051761333c76a5c4ca2b378667cb155fbb9675519572b35d
ToppCellILEUM-inflamed-(1)_T_cell-(1)_CD8_Trm|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2B TRA2A NKTR

1.87e-05184133cef3ee2a4a0af961aa3b4c92150d423e841ae8c1
ToppCellBrain_organoid-organoid_Kanton_Nature|Brain_organoid / Sample Type, Dataset, Time_group, and Cell type.

TRA2B LUC7L2 NKTR

1.90e-05185133857c7ca8493e91ef1d0078ddafd6082020f9b169
ToppCellCOVID-19_Convalescent-PLT_4|World / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

1.93e-051861335954a1e3ffafb33f2a9bc87af3343f304fda4c92
ToppCellILEUM-inflamed-(3)_MNP-(3)_moDC|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2B TRA2A NKTR

1.96e-051871330099def970fbc828756fbf853eca2ce77b8cd342
ToppCellILEUM-non-inflamed-(1)_T_cell-(1)_CD8_Trm|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2B TRA2A NKTR

2.02e-051891332c8a2fb76ea002bac554bc1c761ce960b5e116e1
ToppCellCOVID-19_Mild-PLT_4|World / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

2.15e-0519313398a52523aa1efd5d14a2878ed106828a80a33aa2
ToppCellCOVID-19_Convalescent-PLT_4|COVID-19_Convalescent / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

2.19e-05194133ce1fad4e76a87f0c35e430ed1f2262395df882fd
ToppCell10x3'2.3|World / cell types per 3 fetal stages;per 3',per 5'

TRA2B TRA2A RSRC2

2.19e-05194133fc7ed8350ffe1475b8934dfbb107b51991876b0b
ToppCellCOVID-19_Severe-PLT_4|World / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

2.25e-05196133ad43efdd4d73b6615f65f06a315b33576e317473
ToppCell10x3'2.3-week_17-19|World / cell types per 3 fetal stages;per 3',per 5'

TRA2B TRA2A RSRC2

2.29e-05197133f5cfad0b42d0f817e22cc78b9bfb2b4b7e4330ed
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

RBBP6 NKTR RSRC2

2.29e-051971330fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCellControl-PLT_4|Control / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

2.32e-05198133387fd3037fd52e4d4c42de0588767e58af228b59
ToppCellCOVID-19_Severe-PLT_4|COVID-19_Severe / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

2.32e-05198133abfddbee99ef8c7719e6e6f62571e9be030e4acf
ToppCellCOVID-19_Mild-PLT_4|COVID-19_Mild / Disease Group and Platelet Clusters

TRA2B TRA2A RSRC2

2.32e-051981333d8c33dba759df0974aeb2b9a6b5167ae7a18e1f
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

LUC7L CDK13 NKTR

2.36e-05199133f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

TRA2B SRSF4

8.74e-0415313288ca2d2c2ab19fbee13e18951b993ee05dd30f67
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

TRA2B SRSF4

8.74e-04153132553dff9688a1996d8f4ba16e60c683593d781389
ToppCellfacs-Aorta-Heart-24m-Endothelial-coronary_vascular_endothelial_cell|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 PRM2

1.00e-031641325ee3729fab794d7acb172d14ec5d91aa1a61cd61
ToppCell(03)_Secretory-(4)_1wkpi|(03)_Secretory / shred by cell type and Timepoint

TRA2B LUC7L2

1.14e-0317513206b52f85baa31b55bb31477244892b6da79fe2c9
ToppCell3'_v3|World / Manually curated celltypes from each tissue

TRA2B NKTR

1.18e-0317813242502f14d9c756df8104900ac6484477b885d3d9
ToppCell(00)_Basal-(4)_1wkpi|(00)_Basal / shred by cell type and Timepoint

TRA2B TRA2A

1.27e-03185132bf82ba905e5eee1c39a2731702071d3de10a78b8
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRICKLE1 CDK13

1.29e-0318613290d53c2597a9f3a2b39afba75adfc54f1ca0a4db
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRICKLE1 CDK13

1.29e-031861322cae34336f184f971f7c8684cc27c23a4e7369ed
ToppCelldroplet-Bladder-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRA2B RSRC2

1.30e-03187132663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRA2B RSRC2

1.31e-03188132d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCellILEUM-inflamed-(5)_Plasma-(5)_IgA_plasma_cells|(5)_Plasma / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2A NKTR

1.33e-03189132a0634d72bfdd5f93877724ed6480b50a3a046f71
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic-B_lymphocytic-naive_B_cell|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

PRICKLE1 CDK13

1.34e-03190132a7498fe55b7810c482291db782dc5282675d246a
ToppCell368C-Myeloid-Dendritic-cDC2|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

TRA2B RSRC2

1.36e-0319113285dba3a8a52307df52d1d78a6f278501298f3067
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pro_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

TRA2B CDK13

1.36e-0319113240813c397f533c2f4a6359a77757f736b6d9e07d
ToppCell368C-Myeloid-Dendritic|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

TRA2B RSRC2

1.36e-0319113229f9db28cee6476141b0773682c66e6be940de46
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25|PBMC_fresh-frozen / Compartment, severity and other cell annotations on 10x 3' data (130k)

NKTR RSRC2

1.36e-031911321ecd9849d14d5ebf3daf610e83fb50820cafd3ed
ToppCell10x3'2.3-week_12-13-Myeloid_macrophage-stroma-monocytoid_macrophage|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

TRA2B RSRC2

1.36e-031911328a67dc87c926c826a09cf6469c8ebf90c80b06db
ToppCellmetastatic_Brain-T/NK_cells-Exhausted_CD8+_T|T/NK_cells / Location, Cell class and cell subclass

TRA2B TRA2A

1.36e-031911322ffd40ebf1d63e61a97208ddcbeb6a86e409f9d8
ToppCelldroplet-Pancreas-Endocrine|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 NKTR

1.37e-031921320dfd1e9896c34aee0f842f8de5d0e3af62a15f68
ToppCellControl-PLT_1|World / Disease Group and Platelet Clusters

RBBP6 LUC7L2

1.37e-03192132f595eba81911eb860dce964f1d8269287f50d3ea
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

LUC7L NKTR

1.37e-0319213247646d7e4990be85072987f92bf18d52f8da752e
ToppCellsevere-low-quality_cells|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

CDK13 NKTR

1.38e-031931329337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 NKTR

1.38e-03193132471e65f02937bc18d7c5facdacdf1df58cf0f839
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 NKTR

1.38e-03193132fe451b3295d77b2bd1ac25cf29310c85835a45fe
ToppCelldroplet-Pancreas-Endocrine-21m|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 NKTR

1.40e-031941323a3ecedcdc7691cf21775818b598208fcb980c29
ToppCell10x3'2.3-week_14-16-Lymphocytic_B-B_lineage-pro_B_progenitor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

CDK13 RSRC2

1.40e-03194132f64da5f62e29253d60b9546edf734ba5c17daae1
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 NKTR

1.40e-031941320b023de48ed8a550d169bbe954881eb04bf4f981
ToppCelllymphoid-T_cell-unlabelled(multiplets)|World / Lineage, cell class and subclass

TRA2B RSRC2

1.43e-0319613278b006922307c154622d71fcbc79ae5eed3f4b23
ToppCellCV-Moderate-6|CV / Virus stimulation, Condition and Cluster

TRA2A RBBP6

1.43e-031961327bced0cc2112697593c478fa291b8ed3941fb811
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)

NKTR GPATCH8

1.43e-03196132a9157809122e6fc5783a291522f103bef30943e4
ToppCellCOVID-19_Mild-Classical_Monocyte-cMono_4|Classical_Monocyte / Disease condition and Cell class

NKTR SRSF4

1.44e-03197132e666f6580e9a20b5e550f02125706db17eec8510
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

NKTR RSRC2

1.44e-031971325c33454b10023decd2f5ccda9229b6512659711e
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TRA2B PRICKLE1

1.44e-031971325f6fce382f273e789ffbb75b63e9b4e87519918e
ToppCell5'-GW_trimst-1.5-LargeIntestine|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TRA2B PRICKLE1

1.44e-031971320b2ad6a933ff1a325649cc8f139380fd158a1d42
ToppCellsevere-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

CDK13 NKTR

1.44e-0319713257ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

TRA2A NKTR

1.44e-03197132ef2d1f56acd0be43e69bba7f73f6909ba87f1cb3
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NKTR RSRC2

1.46e-0319813228ef3fc4c17dcb765537b75917f7db78baa522db
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

TRA2A NKTR

1.46e-0319813233a3b279c9ff3b762e52d060dae062167ca2239b
ToppCellPBMC_fresh-frozen|World / Compartment, severity and other cell annotations on 10x 3' data (130k)

TRA2B NKTR

1.46e-03198132dcc223a0396b8b673e4ed8c6733ec6cd74e9a03a
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

NKTR RSRC2

1.46e-0319813244417089b62056269cac38d3134ff209c05b7007
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pre_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

TRA2A RSRC2

1.47e-03199132dd94e42b62af7cbd69c472681d3c758552694ae2
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TRA2B PRICKLE1

1.47e-03199132bb201deb281619113edcd1de2af2d3eb21b967b8
ToppCellhuman_hepatoblastoma-Tumor_cells-T9|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

TRA2B RSRC2

1.47e-03199132e9c83555d2197b740797a9f33b64f8f7a7ba1ee2
ToppCellsevere|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

TRA2B RSRC2

1.48e-03200132accc618d6b960bff30cb531c1226295bfc8650f6
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal-Intermediate|6m / Sample Type, Dataset, Time_group, and Cell type.

RBBP6 RSRC2

1.48e-032001327c261e39ac30b318511373ab7302aa53b8b81b9c
ComputationalNeighborhood of HDAC1

TRA2B TRA2A RBBP6 SRSF4

2.08e-06110104GNF2_HDAC1
ComputationalNeighborhood of CSNK1A1

LUC7L2 RSRC2

4.83e-0436102GCM_CSNK1A1
ComputationalNeighborhood of RAD21

TRA2B SRSF4

5.10e-0437102GCM_RAD21
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

CDK13 NKTR

9.32e-0450102GAVISH_3CA_METAPROGRAM_B_CELLS_B_CELLS_1
ComputationalNeighborhood of PPP1CC

TRA2B SRSF4

1.17e-0356102GCM_PPP1CC
ComputationalNeighborhood of DDX5

TRA2B SRSF4

1.57e-0365102GCM_DDX5
ComputationalNeighborhood of RBBP6

RBBP6 RSRC2

1.82e-0370102GNF2_RBBP6
ComputationalNeighborhood of HEAB

CDK13 GPATCH8

2.55e-0383102MORF_HEAB
DrugAC1NRA5C

TRA2B TRA2A CDK13 SRSF4

2.23e-06174134CID005287709
DrugLanatoside C [17575-22-3]; Up 200; 4uM; PC3; HT_HG-U133A

TRA2B TRA2A RSRC2

9.08e-051591334328_UP
DrugDigoxin [20830-75-5]; Up 200; 5.2uM; MCF7; HT_HG-U133A

TRA2A GPATCH8 RSRC2

1.03e-041661335324_UP
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A_EA

CDK13 LUC7L2 SRSF4

1.15e-041721331072_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

CDK13 LUC7L2 SRSF4

1.15e-041721336993_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

CDK13 LUC7L2 SRSF4

1.17e-041731334565_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A

CDK13 LUC7L2 SRSF4

1.19e-041741335580_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A_EA

CDK13 LUC7L2 SRSF4

1.21e-041751331014_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A_EA

CDK13 LUC7L2 SRSF4

1.21e-041751331058_DN
DrugICI 182,780; Down 200; 1uM; MCF7; HT_HG-U133A_EA

RBBP6 NKTR GPATCH8

1.25e-04177133985_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

CDK13 LUC7L2 SRSF4

1.27e-041781335086_DN
DrugPiperlongumine [20069-09-4]; Up 200; 12.6uM; HL60; HG-U133A

TRA2B RBBP6 RSRC2

1.29e-041791331764_UP
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

CDK13 LUC7L2 SRSF4

1.31e-041801335981_DN
DrugLY 294002; Up 200; 10uM; PC3; HT_HG-U133A

TRA2A NKTR ZNF580

1.33e-041811331236_UP
Drugradicicol, diheterospora chlamydosporia; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

RBBP6 NKTR ZNF580

1.56e-041911331057_DN
Drug0317956-0000 [391210-11-0]; Up 200; 1uM; MCF7; HT_HG-U133A

TRA2A CDK13 NKTR

1.59e-041921333858_UP
Drug17-DMAG; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

RBBP6 NKTR SRSF4

1.61e-041931331051_DN
DrugBetahistine mesylate [54856-23-4]; Down 200; 17.2uM; MCF7; HT_HG-U133A

TRA2B TRA2A RSRC2

1.61e-041931332833_DN
DrugCephalosporanic acid, 7-amino [957-68-6]; Down 200; 14.6uM; PC3; HT_HG-U133A

CDK13 PRM2 ZNF580

1.64e-041941334242_DN
DrugAmoxapine [14028-44-5]; Down 200; 12.8uM; PC3; HG-U133A

TRA2B CDK13 NKTR

1.71e-041971331931_DN
DrugCephalosporanic acid, 7-amino [957-68-6]; Down 200; 14.6uM; HL60; HT_HG-U133A

TRA2A CDK13 RSRC2

1.71e-041971331322_DN
DrugNovobiocin sodium salt [1476-53-5]; Down 200; 6.4uM; PC3; HT_HG-U133A

TRA2A CDK13 NKTR

1.74e-041981334569_DN
DrugMidecamycin [35457-80-8]; Down 200; 5uM; PC3; HG-U133A

CDK13 ZNF580 GPATCH8

1.74e-041981331943_DN
DrugAlfuzosin hydrochloride [81403-68-1]; Up 200; 9.4uM; MCF7; HT_HG-U133A

TRA2A PRM2 NKTR

1.76e-041991333203_UP
DrugPCI 5002

TRA2B RBBP6 LUC7L RSRC2

6.10e-04735134ctd:C568608
DrugSodium Fluoride

RBBP6 LUC7L PRM2 SRSF4

1.49e-03933134ctd:D012969
DrugDigoxigenin [1672-46-4]; Up 200; 10.2uM; MCF7; HT_HG-U133A

TRA2A RSRC2

3.64e-031601325275_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.68e-031611324768_DN
Drug15d-PGJ2; Up 200; 10uM; MCF7; HT_HG-U133A_EA

TRA2B RBBP6

3.73e-031621321069_UP
DrugLanatoside C [17575-22-3]; Up 200; 4uM; PC3; HT_HG-U133A

TRA2A RSRC2

3.73e-031621323771_UP
DrugProscillaridin A [466-06-8]; Up 200; 7.6uM; MCF7; HT_HG-U133A

TRA2A RSRC2

3.73e-031621327340_UP
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.77e-031631325594_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

3.77e-031631327285_DN
Drugtestosterone enanthate

TRA2A NKTR GPATCH8

3.79e-03575133ctd:C004648
DrugLanatoside C [17575-22-3]; Up 200; 4uM; MCF7; HT_HG-U133A

TRA2A RSRC2

3.82e-031641323852_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.86e-031651326085_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.86e-031651322835_DN
DrugHelveticoside [630-64-8]; Up 200; 7.4uM; MCF7; HT_HG-U133A

TRA2A RSRC2

3.86e-031651323851_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.86e-031651325625_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.91e-031661322247_DN
Drug2-amino-3,8-dimethylimidazo(4,5-f)quinoxaline

RBBP6 CDK13

3.91e-03166132ctd:C036990
DrugStrophanthidin [66-28-4]; Up 200; 9.8uM; PC3; HT_HG-U133A

TRA2A RSRC2

3.91e-031661325826_UP
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

3.96e-031671325217_DN
DrugStrophantine octahydrate [11018-89-6]; Up 200; 5.4uM; PC3; HT_HG-U133A

TRA2A RSRC2

3.96e-031671326680_UP
DrugSanguinarine [2447-54-3]; Up 200; 12uM; HL60; HT_HG-U133A

TRA2B RSRC2

3.96e-031671322927_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.00e-031681323868_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.00e-031681326820_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.05e-031691325231_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.05e-031691325572_DN
DrugDigoxin [20830-75-5]; Up 200; 5.2uM; PC3; HT_HG-U133A

TRA2A RSRC2

4.05e-031691326724_UP
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.10e-031701327043_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.10e-031701323791_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.10e-031701323746_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

LUC7L2 SRSF4

4.10e-031701321050_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A_EA

CDK13 LUC7L2

4.14e-031711321000_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.14e-031711321234_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.14e-031711326879_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.14e-031711324954_DN
DrugStrophantine octahydrate [11018-89-6]; Up 200; 5.4uM; MCF7; HT_HG-U133A

TRA2A RSRC2

4.14e-031711325026_UP
DrugBisacodyl [603-50-9]; Up 200; 11uM; MCF7; HT_HG-U133A

TRA2A RSRC2

4.14e-031711323297_UP
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.19e-031721321637_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.19e-031721326439_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.19e-031721324112_DN
Drugcalmidazolium chloride; Up 200; 5uM; MCF7; HT_HG-U133A_EA

PRM2 NKTR

4.19e-03172132906_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.19e-031721322330_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.24e-031731325336_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.24e-031731324665_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.24e-031731322084_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.24e-031731324458_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741326579_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741327105_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741325745_DN
DrugHC toxin from Helminthosporium carbonum; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

LUC7L2 SRSF4

4.29e-03174132909_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741325945_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741323993_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741323462_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741325693_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741321659_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.29e-031741325065_DN
DrugLanatoside C [17575-22-3]; Up 200; 4uM; MCF7; HT_HG-U133A

TRA2A RSRC2

4.29e-031741326048_UP
DrugStrophantine octahydrate [11018-89-6]; Up 200; 5.4uM; HL60; HT_HG-U133A

RBBP6 RSRC2

4.29e-031741321302_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751326736_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751324072_DN
DrugCephaeline dihydrochloride heptahydrate [6487-30-5]; Up 200; 6uM; PC3; HT_HG-U133A

TRA2B RSRC2

4.33e-031751324651_UP
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751325908_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751327387_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751323787_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751326316_DN
DrugSAHA; Down 200; 10uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751321220_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751325935_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 SRSF4

4.33e-031751327236_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.38e-031761326546_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

CDK13 LUC7L2

4.38e-031761322639_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

LUC7L2 SRSF4

4.38e-031761324632_DN

Protein segments in the cluster

PeptideGeneStartEntry
SSRHSRSRSRHRLSR

CDK13

416

Q14004
RDRHRRHRSRSRSHS

LUC7L

296

Q9NQ29
RHRSRSRSHSRGHRR

LUC7L

301

Q9NQ29
SGRRHSSHRSSRRSY

GPATCH8

856

Q9UKJ3
SRSRSHGYHRSRSRS

RBBP6

746

Q7Z6E9
RGSRSHHHRRRRSRK

PRICKLE1

666

Q96MT3
HRHRSRSSSRSRSRS

LUC7L2

301

Q9Y383
HRHRTRSRSRTRSRS

RSRC2

186

Q7L4I2
SRSRSHSRSRSRSRH

SRSF4

186

Q08170
RHRTRSVSYSHSRSR

NKTR

1326

P30414
SHYRRRHCSRRRLHR

PRM2

51

P04554
SRSRSRRHSHRRYTR

TRA2A

56

Q13595
RRHSHRRYTRSRSHS

TRA2A

61

Q13595
RRYTRSRSHSHSHRR

TRA2A

66

Q13595
SRSHSHSHRRRSRSR

TRA2A

71

Q13595
HSHRRRSRSRSYTPE

TRA2A

76

Q13595
RSSHLSRHRATHRAR

ZNF580

131

Q9UK33
RHYTRSRSRSRSHRR

TRA2B

66

P62995