Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	methylated histone binding	ZZZ3 ATRX MSL3 MORC3 PYGO1	1.28e-05	86	70	5	GO:0035064
GeneOntologyMolecularFunction	methylation-dependent protein binding	ZZZ3 ATRX MSL3 MORC3 PYGO1	1.43e-05	88	70	5	GO:0140034
GeneOntologyMolecularFunction	histone binding	ZZZ3 USP51 ATRX MSL3 BAZ1B MORC3 PYGO1	3.94e-05	265	70	7	GO:0042393
GeneOntologyMolecularFunction	DNA-binding transcription factor activity, RNA polymerase II-specific	VAX1 HIVEP1 GZF1 LHX4 ZFHX4 ZNF655 ZNF451 ESR2 ZNF286B NPAS3 ASCL4 ZFHX3 ZBTB18 ZNF286A	3.34e-04	1412	70	14	GO:0000981
GeneOntologyMolecularFunction	modification-dependent protein binding	ZZZ3 ATRX MSL3 MORC3 PYGO1	7.82e-04	206	70	5	GO:0140030
GeneOntologyMolecularFunction	RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	VAX1 HIVEP1	9.22e-04	13	70	2	GO:0001162
GeneOntologyMolecularFunction	zinc ion binding	HIVEP1 ZZZ3 LHX4 ZFHX4 USP51 ESR2 BAZ1B ZFHX3 MORC3 MARCHF4	1.04e-03	891	70	10	GO:0008270
GeneOntologyMolecularFunction	intronic transcription regulatory region sequence-specific DNA binding	VAX1 HIVEP1	1.59e-03	17	70	2	GO:0001161
GeneOntologyBiologicalProcess	chromatin organization	RIF1 ZZZ3 USP51 ATRX ARID4A CTR9 ATF7IP BRPF1 MSL3 ERCC6L2 BAZ1B HDGFL3	4.37e-05	896	70	12	GO:0006325
GeneOntologyBiologicalProcess	negative regulation of transcription by RNA polymerase II	VAX1 RIF1 HIVEP1 GZF1 ARID4A CTR9 ATF7IP ZNF451 ESR2 ZFHX3 ASXL2 MORC3 ZBTB18	4.68e-05	1053	70	13	GO:0000122
GeneOntologyCellularComponent	chromatin	FANCB VAX1 RIF1 ZZZ3 LHX4 ZFHX4 ATRX ARID4A CTR9 ESR2 BRPF1 MSL3 ANKRD11 NPAS3 BAZ1B ASCL4 ZFHX3 MORC3 ZBTB18	3.13e-07	1480	71	19	GO:0000785
GeneOntologyCellularComponent	nuclear body	IL16 HIVEP1 TCF20 ATRX CTR9 ATF7IP ZNF451 EXO1 ZFHX3 MORC3 ZBTB18 TGS1	4.79e-05	903	71	12	GO:0016604
Domain	ZF_PHD_2	TCF20 ATRX BRPF1 BAZ1B ASXL2 PYGO1	1.37e-06	95	69	6	PS50016
Domain	ZF_PHD_1	TCF20 ATRX BRPF1 BAZ1B ASXL2 PYGO1	1.45e-06	96	69	6	PS01359
Domain	Znf_FYVE_PHD	TCF20 ATRX BRPF1 BAZ1B RIMS1 PYGO1	1.71e-05	147	69	6	IPR011011
Domain	Tudor-knot	ARID4A MSL3	2.00e-04	6	69	2	IPR025995
Domain	Tudor-knot	ARID4A MSL3	2.00e-04	6	69	2	PF11717
Domain	PHD	TCF20 BRPF1 BAZ1B PYGO1	3.29e-04	89	69	4	SM00249
Domain	Znf_PHD	TCF20 BRPF1 BAZ1B PYGO1	3.58e-04	91	69	4	IPR001965
Domain	ZINC_FINGER_C2H2_2	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF451 BRPF1 ZNF286B ZFHX3 ZBTB18 ZNF286A	5.29e-04	775	69	10	PS50157
Domain	ZINC_FINGER_C2H2_1	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF451 BRPF1 ZNF286B ZFHX3 ZBTB18 ZNF286A	5.40e-04	777	69	10	PS00028
Domain	Znf_C2H2-like	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF451 BRPF1 ZNF286B ZFHX3 ZBTB18 ZNF286A	6.51e-04	796	69	10	IPR015880
Domain	Znf_C2H2	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF451 BRPF1 ZNF286B ZFHX3 ZBTB18 ZNF286A	7.10e-04	805	69	10	IPR007087
Domain	ZnF_C2H2	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF451 BRPF1 ZNF286B ZFHX3 ZBTB18 ZNF286A	7.30e-04	808	69	10	SM00355
Domain	zf-C2H2	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF451 ZNF286B ZFHX3 ZBTB18 ZNF286A	9.80e-04	693	69	9	PF00096
Domain	zf-H2C2_2	ZNF286B ZNF286A	1.19e-03	14	69	2	PF13465
Domain	-	USP51 ATRX BRPF1 BAZ1B RIMS1 MARCHF4 PYGO1	1.32e-03	449	69	7	3.30.40.10
Domain	Znf_RING/FYVE/PHD	USP51 ATRX BRPF1 BAZ1B RIMS1 MARCHF4 PYGO1	1.50e-03	459	69	7	IPR013083
Domain	Zinc_finger_PHD-type_CS	BRPF1 BAZ1B PYGO1	1.79e-03	65	69	3	IPR019786
Domain	PWWP	BRPF1 HDGFL3	2.45e-03	20	69	2	SM00293
Domain	EPHD	TCF20 BRPF1	2.96e-03	22	69	2	PS51805
Domain	Znf_PHD-finger	BRPF1 BAZ1B PYGO1	3.12e-03	79	69	3	IPR019787
Domain	PWWP	BRPF1 HDGFL3	3.24e-03	23	69	2	PF00855
Domain	PWWP_dom	BRPF1 HDGFL3	3.24e-03	23	69	2	IPR000313
Domain	-	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF286B ZFHX3 ZBTB18 ZNF286A	3.47e-03	679	69	8	3.30.160.60
Domain	PWWP	BRPF1 HDGFL3	3.52e-03	24	69	2	PS50812
Domain	-	VAX1 ZZZ3 LHX4 ZFHX4 ZFHX3	3.93e-03	283	69	5	1.10.10.60
Domain	Znf_C2H2/integrase_DNA-bd	HIVEP1 GZF1 ZFHX4 ZNF655 ZNF286B ZFHX3 ZBTB18 ZNF286A	3.96e-03	694	69	8	IPR013087
Domain	Bromodomain_CS	BRPF1 BAZ1B	4.13e-03	26	69	2	IPR018359
Domain	Homeobox_CS	VAX1 LHX4 ZFHX4 ZFHX3	4.97e-03	186	69	4	IPR017970
Domain	ZnF_U1	ZFHX4 ZFHX3	5.12e-03	29	69	2	SM00451
Domain	Znf_U1	ZFHX4 ZFHX3	5.12e-03	29	69	2	IPR003604
Domain	SNF2_N	ATRX ERCC6L2	6.21e-03	32	69	2	IPR000330
Domain	Chromodomain-like	ARID4A MSL3	6.21e-03	32	69	2	IPR016197
Domain	SNF2_N	ATRX ERCC6L2	6.21e-03	32	69	2	PF00176
Domain	Chromo/shadow_dom	ARID4A MSL3	6.60e-03	33	69	2	IPR000953
Domain	CHROMO	ARID4A MSL3	6.60e-03	33	69	2	SM00298
Domain	Homeodomain-like	VAX1 ZZZ3 LHX4 ZFHX4 ZFHX3	7.65e-03	332	69	5	IPR009057
Domain	BROMODOMAIN_1	BRPF1 BAZ1B	8.24e-03	37	69	2	PS00633
Domain	Bromodomain	BRPF1 BAZ1B	8.68e-03	38	69	2	PF00439
Domain	BROMODOMAIN_2	BRPF1 BAZ1B	1.01e-02	41	69	2	PS50014
Domain	BROMO	BRPF1 BAZ1B	1.05e-02	42	69	2	SM00297
Domain	Bromodomain	BRPF1 BAZ1B	1.05e-02	42	69	2	IPR001487
Domain	-	BRPF1 BAZ1B	1.05e-02	42	69	2	1.20.920.10
Domain	Homeobox	VAX1 LHX4 ZFHX4 ZFHX3	1.10e-02	234	69	4	PF00046
Pathway	REACTOME_GENE_EXPRESSION_TRANSCRIPTION	ZZZ3 RAE1 CTR9 ATF7IP ZNF655 ESR2 BRPF1 ZNF286B EXO1 BAZ1B ZFHX3 BOD1L1 ZNF286A	6.67e-06	1022	43	13	MM15436
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	RIF1 HIVEP1 TCF20 ATRX ARID4A CTR9 BRPF1 MSL3 EXO1 OTUD4 BAZ1B BUD13 RIMS1 MED13 PPP6R3	4.10e-11	774	71	15	15302935
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	USP31 DENND4A HIVEP1 ARHGEF28 TCF20 MTUS1 DOCK11 ZNF286B ANKRD11 EXO1 BOD1L1 CRYBG3 MORC3 GAB1	1.91e-09	861	71	14	36931259
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	HIVEP1 ZZZ3 RAE1 ATRX CTR9 ATF7IP ZNF451 BAZ1B CRYBG3 MORC3 GAB1 PPP6R3	2.52e-09	588	71	12	38580884
Pubmed	Human transcription factor protein interaction networks.	RIF1 HIVEP1 ZZZ3 LHX4 TCF20 ZFHX4 ATRX ARID4A ATF7IP ZNF451 OTUD4 BAZ1B ZFHX3 ASXL2 ANKHD1 PPP6R3 PYGO1	3.12e-09	1429	71	17	35140242
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	RIF1 HIVEP1 ZZZ3 TCF20 RAE1 ATRX ARID4A ATF7IP ZNF451 ANKRD11 BAZ1B BUD13 BOD1L1 HDGFL3	7.00e-09	954	71	14	36373674
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	USP31 TENM4 TCF20 ZNF451 DLGAP4 OTUD4 BOD1L1 ASXL2 MARCHF4 MAP3K4	1.06e-08	407	71	10	12693553
Pubmed	Interaction network of human early embryonic transcription factors.	HIVEP1 ZZZ3 TCF20 RAE1 ZFHX4 ARID4A BAZ1B ZFHX3 ASXL2	4.21e-08	351	71	9	38297188
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	RIF1 HIVEP1 TCF20 ATRX ARID4A ZNF451 BRPF1 BAZ1B BOD1L1 MORC3 HDGFL3	4.22e-08	608	71	11	36089195
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	IL16 ZZZ3 C5orf22 RAE1 ZFHX4 MTUS1 BRPF1 BAZ1B BUD13 ZFHX3 CRYBG3 ANKHD1 ANKS3 UNC80	4.95e-08	1116	71	14	31753913
Pubmed	A human MAP kinase interactome.	RIF1 HIVEP1 TCF20 CCDC186 ATF7IP ZNF451 ZBTB18 GAB1 MAP3K4 PYGO1	5.58e-08	486	71	10	20936779
Pubmed	Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.	RIF1 HIVEP1 TCF20 ZNF655 ZNF451 ESR2 BRPF1 ZNF286B BAZ1B ZFHX3 ZNF286A	7.16e-07	808	71	11	20412781
Pubmed	A census of human transcription factors: function, expression and evolution.	VAX1 HIVEP1 ZZZ3 LHX4 ZFHX4 ZNF451 ESR2 NPAS3 ASCL4 ZFHX3 ZBTB18	2.22e-06	908	71	11	19274049
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	HIVEP1 ZZZ3 TCF20 ZFHX4 ATF7IP ZFHX3 CRYBG3 ANKHD1	2.24e-06	418	71	8	34709266
Pubmed	DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.	FANCB RIF1 ZZZ3 TCF20 ZNF451 BOD1L1 MORC3 MED13	4.04e-06	453	71	8	29656893
Pubmed	The mouse ZFH-4 protein contains four homeodomains and twenty-two zinc fingers.	ZFHX4 ZFHX3	4.11e-06	2	71	2	10873665
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	RIF1 SPATS2L GZF1 ATRX CTR9 ANKRD11 OTUD4 BAZ1B BUD13 ZFHX3 ANKHD1 MED13 PPP6R3	9.35e-06	1497	71	13	31527615
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	RIF1 ZZZ3 TCF20 RAE1 ATRX ARID4A CTR9 MSL3 ANKRD11 EXO1 BAZ1B ASXL2	1.13e-05	1294	71	12	30804502
Pubmed	Primary role of the serotonergic midline system in synchronized spontaneous activity during development of the embryonic mouse hindbrain.	ARHGEF28 HTR2A	1.23e-05	3	71	2	16902991
Pubmed	Estrogen receptor isoform-specific regulation of the retinoblastoma-binding protein 1 (RBBP1) gene: roles of AF1 and enhancer elements.	ARID4A ESR2	1.23e-05	3	71	2	16873370
Pubmed	A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.	HIVEP1 ZZZ3 TCF20 BRPF1 NPAS3 BAZ1B ZFHX3 ZBTB18 PYGO1	1.39e-05	709	71	9	22988430
Pubmed	Local anesthetics impair the growth and self-renewal of glioblastoma stem cells by inhibiting ZDHHC15-mediated GP130 palmitoylation.	RIF1 TENM4 CRYBG3 UNC80	1.40e-05	71	71	4	33541421
Pubmed	Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus.	VAX1 LHX4 BAZ1B ZFHX3	1.93e-05	77	71	4	21525287
Pubmed	Behavioral abnormalities observed in Zfhx2-deficient mice.	ZFHX4 ZFHX3	2.46e-05	4	71	2	23300874
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	RIF1 TCF20 ATRX BAZ1B ZFHX3 BOD1L1	2.53e-05	283	71	6	30585729
Pubmed	Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.	RAE1 ATRX DOCK11 CTR9 EIF2AK3 MAP3K4 PPP6R3	3.27e-05	440	71	7	34244565
Pubmed	NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.	TCF20 ZFHX4 BAZ1B ZFHX3	6.05e-05	103	71	4	32744500
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	RIF1 ATRX CTR9 ATF7IP BOD1L1 MORC3	6.15e-05	332	71	6	32786267
Pubmed	Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP.	ATRX ATF7IP ZNF451	6.53e-05	38	71	3	28680062
Pubmed	Direct binding of CoREST1 to SUMO-2/3 contributes to gene-specific repression by the LSD1/CoREST1/HDAC complex.	ATRX ATF7IP ZNF451 BAZ1B	6.77e-05	106	71	4	19394292
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	ATRX CTR9 ZNF655 GRAMD2B OTUD4 BAZ1B BOD1L1 ASXL2 ANKHD1 TGS1	6.84e-05	1084	71	10	11544199
Pubmed	Interactomes of Glycogen Synthase Kinase-3 Isoforms.	DENND4A MTUS1 CRYBG3 GAB1 PPP6R3	7.05e-05	209	71	5	36779422
Pubmed	An atlas of combinatorial transcriptional regulation in mouse and man.	DENND4A ZZZ3 LHX4 TCF20 ZNF451 ESR2 BRPF1 ANKS3 PYGO1	7.28e-05	877	71	9	20211142
Pubmed	Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette.	RIF1 TENM4 GZF1 ANKRD11 ZFHX3 MED13 MAP3K4	1.13e-04	536	71	7	15840001
Pubmed	Exchangeable gene trap using the Cre/mutated lox system.	RIF1 TENM4 GZF1 ANKRD11 ZFHX3 MED13 MAP3K4	1.15e-04	538	71	7	10512203
Pubmed	Mutations of the Transcriptional Corepressor ZMYM2 Cause Syndromic Urinary Tract Malformations.	ZZZ3 ATF7IP ZNF451 MORC3	1.28e-04	125	71	4	32891193
Pubmed	Systematic proteomics of endogenous human cohesin reveals an interaction with diverse splicing factors and RNA-binding proteins required for mitotic progression.	RIF1 ANKRD11 OTUD4 BOD1L1 MED13	2.41e-04	272	71	5	31010829
Pubmed	Meta-analysis identifies six new susceptibility loci for atrial fibrillation.	ESR2 ZFHX3	2.68e-04	12	71	2	22544366
Pubmed	Common genetic variation and performance on standardized cognitive tests.	HTR2A GRAMD2B RIMS1	2.83e-04	62	71	3	20125193
Pubmed	The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells.	RAE1 ZFHX4 CTR9 MSL3 BOD1L1	2.84e-04	282	71	5	23667531
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	ATRX BRPF1 ANKRD11 BAZ1B	3.07e-04	157	71	4	30186101
Pubmed	Loss of the tumor suppressor BAP1 causes myeloid transformation.	OTUD4 ASXL2	3.16e-04	13	71	2	22878500
Pubmed	The functional interactome landscape of the human histone deacetylase family.	RIF1 ARID4A ANKRD11 BAZ1B PPP6R3	3.18e-04	289	71	5	23752268
Pubmed	A neurogenomics approach to gene expression analysis in the developing brain.	CCDC186 ZNF451 BAZ1B ZFHX3	4.15e-04	170	71	4	15582152
Pubmed	Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.	SPATS2L TENM4 ATRX DOCK11 SYT6 OTUD4	4.25e-04	475	71	6	31040226
Pubmed	Ablation of Zfhx4 results in early postnatal lethality by disrupting the respiratory center in mice.	VAX1 ZFHX4	4.84e-04	16	71	2	33475140
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	ARHGEF28 ZNF286B ARHGAP25 MORC3 UNC80 ZNF286A	5.17e-04	493	71	6	15368895
Pubmed	Protein interaction discovery using parallel analysis of translated ORFs (PLATO).	HTR2A NKAPL HDGFL3	5.56e-04	78	71	3	23503679
Pubmed	Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism.	RIF1 HIVEP1 ARHGEF28 ARID4A MSL3 BUD13 ANKHD1 GAB1	5.88e-04	925	71	8	28986522
Pubmed	An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse.	RIF1 BAZ1B	6.16e-04	18	71	2	24025402
Pubmed	Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder.	TENM4 NPAS3	6.87e-04	19	71	2	18711365
Pubmed	A polygenic basis for four classical Fredrickson hyperlipoproteinemia phenotypes that are characterized by hypertriglyceridemia.	BAZ1B BUD13	6.87e-04	19	71	2	19656773
Pubmed	The chromosomal location of the mouse mammary tumor gene Int6 and related pseudogenes in the mouse genome.	HTR2A MAP3K4	6.87e-04	19	71	2	7558022
Pubmed	The ubiquitin ligase Uhrf2 is a master regulator of cholesterol biosynthesis and is essential for liver regeneration.	RIF1 ATRX BAZ1B	7.39e-04	86	71	3	37253089
Pubmed	The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.	RIF1 GZF1 TCF20 ZNF655 ZNF451 BAZ1B MORC3 ZNF286A PPP6R3	7.47e-04	1203	71	9	29180619
Pubmed	An endoplasmic reticulum stress regulator, Tmbim6, modulates secretory stage of mice molar.	DSPP EIF2AK3	7.62e-04	20	71	2	30963569
Pubmed	The histone demethylase Kdm6b regulates subtype diversification of mouse spinal motor neurons during development.	ZFHX4 ZFHX3	7.62e-04	20	71	2	35177643
Pubmed	Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation.	ZNF451 ESR2 DLGAP4 GRAMD2B EXO1 ZBTB18 EIF2AK3 MED13 PPP6R3	8.01e-04	1215	71	9	15146197
Pubmed	Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.	RIF1 ATRX DLGAP4 OTUD4 ANKHD1 PPP6R3	8.15e-04	538	71	6	28524877
Pubmed	Compartmentalization of the SUMO/RNF4 pathway by SLX4 drives DNA repair.	ZZZ3 ATRX CTR9 ATF7IP ANKHD1	8.28e-04	357	71	5	37059091
Pubmed	A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.	DENND4A ERCC6L2 ASXL2 UNC80	8.36e-04	205	71	4	12040188
Pubmed	The Polycomb Repressive Complex 1 Protein BMI1 Is Required for Constitutive Heterochromatin Formation and Silencing in Mammalian Somatic Cells.	ATRX BAZ1B	8.41e-04	21	71	2	26468281
Pubmed	Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.	USP31 ATRX CTR9 ZNF451 ANKRD11 BAZ1B CRYBG3 EIF2AK3 GAB1 PPP6R3	8.50e-04	1487	71	10	33957083
Pubmed	ATRX proximal protein associations boast roles beyond histone deposition.	ZFHX4 ATRX ZNF655	8.71e-04	91	71	3	34780483
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	ZZZ3 TCF20 BAZ1B BOD1L1 ANKHD1 PPP6R3	9.05e-04	549	71	6	38280479
Pubmed	The TRAP/Mediator coactivator complex interacts directly with estrogen receptors alpha and beta through the TRAP220 subunit and directly enhances estrogen receptor function in vitro.	ESR2 MED13	9.24e-04	22	71	2	11867769
Pubmed	DISC1 (Disrupted-In-Schizophrenia 1) is a centrosome-associated protein that interacts with MAP1A, MIPT3, ATF4/5 and NUDEL: regulation and loss of interaction with mutation.	ATF7IP ANKHD1	9.24e-04	22	71	2	12812986
Pubmed	Cloning and enzymatic analysis of 22 novel human ubiquitin-specific proteases.	USP31 USP51	1.01e-03	23	71	2	14715245
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	RIF1 TCF20 ATRX CTR9 ZNF451 BAZ1B BOD1L1 MED13	1.07e-03	1014	71	8	32416067
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	TCF20 ATRX ZFHX3 MORC3	1.09e-03	220	71	4	35785414
Pubmed	A genome-wide association study in the genetic analysis of idiopathic thrombophilia project suggests sex-specific regulation of mitochondrial DNA levels.	NPAS3 BUD13	1.10e-03	24	71	2	25240745
Pubmed	Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.	TCF20 ATRX CTR9 ZNF451	1.12e-03	222	71	4	37071664
Pubmed	The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation.	RIF1 RAE1 ZFHX4 ARID4A OTUD4 ZFHX3	1.23e-03	583	71	6	29844126
Pubmed	siRNA screening identifies differences in the Fanconi anemia pathway in BALB/c-Trp53+/- with susceptibility versus C57BL/6-Trp53+/- mice with resistance to mammary tumors.	FANCB EXO1	1.29e-03	26	71	2	23435420
Pubmed	Comprehensive identification of phosphorylation sites in postsynaptic density preparations.	ATRX DLGAP4 RIMS1 BCAS1	1.30e-03	231	71	4	16452087
Pubmed	Functional proteomics mapping of a human signaling pathway.	HIVEP1 ATRX CTR9 ATF7IP ZNF451 ASXL2	1.32e-03	591	71	6	15231748
Pubmed	Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.	USP31 RIF1 MTUS1 CTR9 OTUD4 CRYBG3 GAB1 PPP6R3	1.32e-03	1049	71	8	27880917
Pubmed	Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets.	RIF1 HIVEP1 TCF20 ANKHD1	1.34e-03	233	71	4	37704626
Pubmed	Phosphoproteomics screen reveals akt isoform-specific signals linking RNA processing to lung cancer.	ATRX EIF2AK3	1.50e-03	28	71	2	24462114
Pubmed	Identification and analysis of key circRNAs in the mouse embryonic ovary provides insight into primordial follicle development.	ARHGEF28 ESR2	1.72e-03	30	71	2	38310234
Pubmed	SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.	CTR9 BAZ1B BUD13 BOD1L1	1.76e-03	251	71	4	31076518
Pubmed	Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.	ATRX CTR9 BAZ1B BUD13	1.76e-03	251	71	4	28077445
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	RIF1 ZFHX4 ARID4A NPAS3 ASXL2 ANKHD1 EIF2AK3	1.82e-03	857	71	7	25609649
Pubmed	TRAF1 Coordinates Polyubiquitin Signaling to Enhance Epstein-Barr Virus LMP1-Mediated Growth and Survival Pathway Activation.	OTUD4 EIF2AK3	1.84e-03	31	71	2	25996949
Pubmed	Maternal diabetes alters transcriptional programs in the developing embryo.	ATRX BAZ1B	1.96e-03	32	71	2	19538749
Pubmed	Regulation of ETAA1-mediated ATR activation couples DNA replication fidelity and genome stability.	BRPF1 TNFRSF10D PPP6R3	2.02e-03	122	71	3	31615875
Interaction	YWHAH interactions	USP31 DENND4A HIVEP1 ARHGEF28 TCF20 RAE1 MTUS1 DOCK11 ESR2 ZNF286B ANKRD11 EXO1 BOD1L1 RIMS1 CRYBG3 MORC3 MARCHF4 GAB1	2.57e-08	1102	70	18	int:YWHAH
Interaction	NUP43 interactions	RIF1 HIVEP1 ZZZ3 TCF20 RAE1 ARID4A ATF7IP ANKRD11 BUD13 ZFHX3 BOD1L1 ASXL2	1.46e-06	625	70	12	int:NUP43
Interaction	CDK8 interactions	RIF1 HIVEP1 ZZZ3 CTR9 ESR2 BUD13 MED13	1.19e-05	222	70	7	int:CDK8
Interaction	KDM1A interactions	IL16 HIVEP1 ZZZ3 TCF20 ZFHX4 ATF7IP ZNF451 ESR2 ZFHX3 CRYBG3 ANKHD1 ZBTB18 PPP6R3	1.85e-05	941	70	13	int:KDM1A
Interaction	TERF2IP interactions	RIF1 HIVEP1 ZZZ3 TCF20 ATF7IP ESR2 ANKRD11 BOD1L1 HDGFL3 PPP6R3	1.99e-05	552	70	10	int:TERF2IP
Interaction	KDM6A interactions	ZZZ3 LHX4 ESR2 BOD1L1 ASXL2 PPP6R3	2.11e-05	162	70	6	int:KDM6A
Interaction	TLX1 interactions	HIVEP1 TCF20 ZFHX4 ZFHX3 ASXL2 PYGO1	3.26e-05	175	70	6	int:TLX1
Interaction	SMC5 interactions	RIF1 HIVEP1 ZZZ3 TCF20 RAE1 ATRX ARID4A ATF7IP ANKRD11 BAZ1B BUD13 BOD1L1 HDGFL3	3.48e-05	1000	70	13	int:SMC5
Interaction	HNF4A interactions	HIVEP1 ZZZ3 ATRX ATF7IP ZNF451 ASXL2 TGS1	4.70e-05	275	70	7	int:HNF4A
Interaction	H3-3A interactions	RIF1 HIVEP1 TCF20 ATRX ZNF451 BRPF1 BAZ1B BOD1L1 MORC3 HDGFL3 PPP6R3	5.08e-05	749	70	11	int:H3-3A
Interaction	HNF1B interactions	HIVEP1 LHX4 ZFHX4 ATF7IP ZFHX3 ASXL2	5.16e-05	190	70	6	int:HNF1B
Interaction	H3C3 interactions	RIF1 HIVEP1 TCF20 ATRX ARID4A BRPF1 BAZ1B BOD1L1 MORC3	5.20e-05	495	70	9	int:H3C3
Interaction	FEV interactions	HIVEP1 TCF20 ZFHX4 ATRX ZFHX3 ASXL2	7.44e-05	203	70	6	int:FEV
Interaction	SFN interactions	USP31 DENND4A ARHGEF28 RAE1 MTUS1 DOCK11 ESR2 EXO1 CRYBG3 GAB1	1.32e-04	692	70	10	int:SFN
Interaction	NFIX interactions	HIVEP1 ZZZ3 LHX4 ZFHX4 ESR2 ZFHX3	1.37e-04	227	70	6	int:NFIX
Interaction	H2BC21 interactions	RIF1 ZZZ3 TCF20 ATRX ARID4A CTR9 BRPF1 MSL3 EXO1 BAZ1B	1.38e-04	696	70	10	int:H2BC21
Interaction	YWHAZ interactions	USP31 DENND4A HIVEP1 ARHGEF28 RAE1 MTUS1 DOCK11 ESR2 EXO1 OTUD4 ASXL2 MORC3 GAB1 MAP3K4	1.50e-04	1319	70	14	int:YWHAZ
Interaction	H2BC8 interactions	RIF1 TCF20 ATRX ARID4A BRPF1 MSL3 BAZ1B BUD13 MORC3	1.65e-04	576	70	9	int:H2BC8
GeneFamily	Zinc fingers C2H2-type\|ZF class homeoboxes and pseudogenes	HIVEP1 GZF1 ZNF655 ZNF451 ZNF286B ZFHX3 ZBTB18 ZNF286A	6.34e-04	718	49	8	28
GeneFamily	Zinc fingers C2H2-type\|ZF class homeoboxes and pseudogenes	ZFHX4 ZFHX3	7.39e-04	15	49	2	529
GeneFamily	PHD finger proteins	BRPF1 BAZ1B PYGO1	1.86e-03	90	49	3	88
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	RIF1 HIVEP1 ZZZ3 ATRX ARID4A ZNF451 OTUD4 BAZ1B ZFHX3 CRYBG3 ZBTB18 MED13 MAP3K4	3.73e-07	856	70	13	M4500
Coexpression	DAZARD_RESPONSE_TO_UV_NHEK_DN	RIF1 ZZZ3 ATRX MTUS1 ZNF451 OTUD4 BAZ1B MORC3	1.37e-06	300	70	8	M8702
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	RIF1 IL16 DENND4A ATRX ARID4A DOCK11 STK17B ATF7IP ZNF655 ANKRD11 OTUD4 BAZ1B BOD1L1 ARHGAP25 ASXL2 MED13	1.49e-06	1492	70	16	M40023
Coexpression	NAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY_DN	RIF1 DENND4A HIVEP1 RAE1 ARID4A CCDC186 ZNF451 BOD1L1 EIF2AK3 MED13 TGS1	1.78e-06	680	70	11	M41089
Coexpression	MITSIADES_RESPONSE_TO_APLIDIN_UP	DENND4A MTUS1 STK17B ATF7IP OTUD4 MORC3 EIF2AK3 HDGFL3 TGS1	2.81e-06	445	70	9	M7928
Coexpression	GSE26559_TCF1_KO_VS_WT_LIN_NEG_CELL_UP	C5orf22 STK17B MSL3 BAZ1B ARHGAP25 CRYBG3	1.51e-05	198	70	6	M8423
Coexpression	PUJANA_ATM_PCC_NETWORK	RIF1 IL16 ZZZ3 HTR2A TCF20 STK17B CTR9 ESR2 MSL3 BAZ1B ARHGAP25 RIMS1 TNFRSF10D	7.17e-05	1394	70	13	M9585
Coexpression	MENON_FETAL_KIDNEY_0_CAP_MESENCHYME_CELLS	RIF1 ATRX ANKRD11 BAZ1B	1.00e-04	90	70	4	M39250
Coexpression	GSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP	RIF1 DOCK11 ATF7IP BAZ1B MED13	1.22e-04	180	70	5	M8239
Coexpression	CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3	ARHGEF28 MTUS1 DOCK11 STK17B CCDC186 GRAMD2B BCAS1 CRYBG3 EIF2AK3	1.31e-04	726	70	9	M4210
Coexpression	MANNO_MIDBRAIN_NEUROTYPES_HGABA	ZFHX4 ATRX MTUS1 ARID4A CCDC186 SYT6 NPAS3 OTUD4 ZFHX3 BOD1L1 RIMS1	1.58e-04	1106	70	11	M39071
Coexpression	GSE18893_TCONV_VS_TREG_2H_TNF_STIM_DN	CCDC186 ZNF655 BOD1L1 ZBTB18 MED13	1.73e-04	194	70	5	M7306
Coexpression	GSE9960_HEALTHY_VS_GRAM_NEG_AND_POS_SEPSIS_PBMC_DN	ATRX ZNF451 GRAMD2B CRYBG3 EIF2AK3	1.81e-04	196	70	5	M7124
Coexpression	GSE34156_UNTREATED_VS_24H_TLR1_TLR2_LIGAND_TREATED_MONOCYTE_DN	ZNF655 ZNF451 MSL3 ZBTB18 PPP6R3	1.81e-04	196	70	5	M8685
Coexpression	GSE17301_IFNA2_VS_IFNA5_STIM_ACD3_ACD28_ACT_CD8_TCELL_UP	DENND4A HIVEP1 CTR9 ZBTB18 MAP3K4	1.90e-04	198	70	5	M8036
Coexpression	GSE22886_DAY1_VS_DAY7_MONOCYTE_IN_CULTURE_UP	IL16 ANKHD1 MED13 MAP3K4 PPP6R3	1.90e-04	198	70	5	M4462
Coexpression	GSE29949_MICROGLIA_BRAIN_VS_CD8_POS_DC_SPLEEN_UP	IL16 HIVEP1 MSL3 ZBTB18 MAP3K4	1.95e-04	199	70	5	M8396
Coexpression	GSE25123_CTRL_VS_IL4_STIM_MACROPHAGE_DN	ZZZ3 ARID4A BRPF1 GAB1 MAP3K4	1.95e-04	199	70	5	M7924
Coexpression	GSE27786_NEUTROPHIL_VS_MONO_MAC_UP	ZFHX4 MTUS1 ATF7IP MARCHF4 ANKS3	1.95e-04	199	70	5	M4880
Coexpression	GSE36888_STAT5_AB_KNOCKIN_VS_WT_TCELL_IL2_TREATED_6H_UP	TCF20 STK17B ERCC6L2 ASXL2 MARCHF4	1.95e-04	199	70	5	M8744
Coexpression	GSE39820_CTRL_VS_TGFBETA1_IL6_IL23A_CD4_TCELL_UP	RIF1 C5orf22 ERCC6L2 OTUD4 MORC3	1.95e-04	199	70	5	M5607
Coexpression	GSE4748_CTRL_VS_CYANOBACTERIUM_LPSLIKE_STIM_DC_3H_UP	MTUS1 ATF7IP BOD1L1 ARHGAP25 MED13	1.99e-04	200	70	5	M6477
Coexpression	GSE13493_DP_VS_CD4INTCD8POS_THYMOCYTE_UP	BRPF1 ANKHD1 ZBTB18 MED13 PPP6R3	1.99e-04	200	70	5	M3312
Coexpression	GSE17301_CTRL_VS_48H_ACD3_ACD28_IFNA5_STIM_CD8_TCELL_UP	IL16 ZZZ3 ATRX ZFHX3 BOD1L1	1.99e-04	200	70	5	M8050
Coexpression	GSE17301_IFNA2_VS_IFNA2_AND_ACD3_ACD28_STIM_CD8_TCELL_UP	DENND4A HIVEP1 TCF20 MTUS1 OTUD4	1.99e-04	200	70	5	M8042
Coexpression	GSE26343_UNSTIM_VS_LPS_STIM_MACROPHAGE_DN	IL16 CCDC186 GRAMD2B MSL3 ZFHX3	1.99e-04	200	70	5	M8648
Coexpression	GSE39820_TGFBETA1_IL6_VS_TGFBETA1_IL6_IL23A_TREATED_CD4_TCELL_UP	ZNF655 ZNF451 ARHGAP25 EIF2AK3 MAP3K4	1.99e-04	200	70	5	M5617
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#2_top-relative-expression-ranked_1000	USP31 RIF1 ATRX ZNF451 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13 TGS1	1.08e-07	330	69	10	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k2_1000
CoexpressionAtlas	DevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_k-means-cluster#5_top-relative-expression-ranked_1000	RIF1 C5orf22 ARHGEF28 ATRX ERCC6L2 ANKRD11 OTUD4 BAZ1B ASXL2 MED13	1.39e-07	339	69	10	gudmap_developingKidney_e15.5_ureter tip_flank cortic collct_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_1000	RIF1 DENND4A TENM4 ZFHX4 ARID4A ATF7IP ZNF451 NPAS3 ZFHX3 ASXL2 RIMS1 ZNF286A HDGFL3 PYGO1	4.86e-07	850	69	14	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_500	USP31 RIF1 ZFHX4 ERCC6L2 NPAS3 BAZ1B ZFHX3 ASXL2 RIMS1 MED13	5.05e-07	390	69	10	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_top-relative-expression-ranked_1000	USP31 RIF1 TCF20 ZFHX4 ATRX ZNF451 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13 TGS1	1.96e-06	818	69	13	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5	RIF1 TCF20 USP51 ATRX ARID4A ERCC6L2 NPAS3 EXO1 BAZ1B BOD1L1 ANKHD1 EIF2AK3 TGS1	2.34e-06	831	69	13	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#5_top-relative-expression-ranked_1000	RIF1 DENND4A ZFHX4 ARID4A ATF7IP ZNF451 ZFHX3 ASXL2 HDGFL3 PYGO1	3.15e-06	478	69	10	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000_k5
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_1000	C5orf22 ATRX CCDC186 ZNF451 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	3.38e-06	375	69	9	gudmap_developingKidney_e15.5_cortic collect duct_1000_k4
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2	RIF1 ATRX ARID4A EXO1 BAZ1B BOD1L1 ANKHD1 TGS1	7.45e-06	311	69	8	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlas	DevelopingKidney_e15.5_Endothelial cells_emap-29965_k-means-cluster#5_top-relative-expression-ranked_1000	USP31 ATRX ERCC6L2 BAZ1B ASXL2	7.91e-06	84	69	5	gudmap_developingKidney_e15.5_Endothelial cells_1000_k5
CoexpressionAtlas	DevelopingKidney_e15.5_Cap mesenchyme_emap-27738_k-means-cluster#5_top-relative-expression-ranked_1000	USP31 RIF1 ATRX ERCC6L2 ASXL2 MED13	8.00e-06	146	69	6	gudmap_developingKidney_e15.5_Cap mesenchyme_1000_k5
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_top-relative-expression-ranked_1000	RIF1 TENM4 ZFHX4 ATRX DOCK11 ZNF451 ANKRD11 EXO1 ZFHX3 ASXL2 MORC3 TGS1	9.69e-06	804	69	12	gudmap_developingGonad_e12.5_ovary_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_1000	USP31 TENM4 ZFHX4 ATRX CTR9 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13 PYGO1	9.93e-06	806	69	12	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_1000
CoexpressionAtlas	DevelopingKidney_e15.5_Proximal Tubules_emap-28005_k-means-cluster#3_top-relative-expression-ranked_1000	C5orf22 ERCC6L2 NPAS3 OTUD4 ASXL2 MED13	1.01e-05	152	69	6	gudmap_developingKidney_e15.5_Proximal Tubules_1000_k3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#2_top-relative-expression-ranked_500	USP31 ERCC6L2 BAZ1B ASXL2 MED13	1.05e-05	89	69	5	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500_k2
CoexpressionAtlas	DevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_k-means-cluster#5_top-relative-expression-ranked_500	C5orf22 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	1.17e-05	156	69	6	gudmap_developingKidney_e15.5_ureter tip_flank cortic collct_500_k5
CoexpressionAtlas	DevelopingKidney_e15.5_Endothelial cells_emap-29977_k-means-cluster#3_top-relative-expression-ranked_1000	ATRX ERCC6L2 BAZ1B ASXL2 MED13	1.17e-05	91	69	5	DevelopingKidney_e15.5_Endothelial cells_emap-29977_k3_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_1000	RIF1 DENND4A ZFHX4 ARID4A ZNF451 ERCC6L2 NPAS3 ZFHX3 ASXL2 MED13 HDGFL3 PYGO1	1.43e-05	836	69	12	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000	VAX1 RIF1 ZFHX4 USP51 ATRX ARID4A DOCK11 CCDC186 BAZ1B ZFHX3 BOD1L1 ASXL2 PPP6R3	1.53e-05	989	69	13	Facebase_RNAseq_e10.5_Maxillary Arch_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#5_top-relative-expression-ranked_500	USP31 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	1.61e-05	165	69	6	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k5_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e15.5_Urothelium_emap-28091_k-means-cluster#1_top-relative-expression-ranked_1000	C5orf22 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	2.10e-05	173	69	6	gudmap_developingLowerUrinaryTract_e15.5_Urothelium_1000_k1
CoexpressionAtlas	DevelopingKidney_e15.5_Medullary collecting duct_emap-28063_k-means-cluster#4_top-relative-expression-ranked_1000	C5orf22 ARHGEF28 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	2.20e-05	261	69	7	gudmap_developingKidney_e15.5_Medullary collecting duct_1000_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#3_top-relative-expression-ranked_1000	USP31 ATRX CTR9 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	2.56e-05	369	69	8	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k3_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#5_top-relative-expression-ranked_1000	RIF1 DENND4A ARID4A ZNF451 ZFHX3 ASXL2 MED13 HDGFL3 PYGO1	2.95e-05	492	69	9	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_1000	USP31 RIF1 C5orf22 ZFHX4 ERCC6L2 NPAS3 BAZ1B ZFHX3 ASXL2 RIMS1 MED13	3.51e-05	769	69	11	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#5_top-relative-expression-ranked_500	USP31 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	4.00e-05	194	69	6	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k5_500
CoexpressionAtlas	DevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_500	C5orf22 ATRX ERCC6L2 OTUD4 BAZ1B MED13	4.87e-05	201	69	6	gudmap_developingKidney_e15.5_500_k3
CoexpressionAtlas	DevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_top-relative-expression-ranked_1000	RIF1 C5orf22 ARHGEF28 ATRX BRPF1 ERCC6L2 ANKRD11 OTUD4 BAZ1B ASXL2 MED13	5.08e-05	801	69	11	gudmap_developingKidney_e15.5_ureter tip_1000_flank cortic collct
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_500	USP31 ZFHX4 ERCC6L2 NPAS3 BAZ1B ASXL2 MED13 PYGO1	5.12e-05	407	69	8	gudmap_developingLowerUrinaryTract_e14.5_ urethra_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_500	USP31 ZFHX4 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13	5.21e-05	408	69	8	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_1000	USP31 SPATS2L TENM4 ZFHX4 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13 PYGO1	5.38e-05	806	69	11	gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#1_top-relative-expression-ranked_1000	USP31 C5orf22 ERCC6L2 BAZ1B ASXL2 MED13	6.05e-05	209	69	6	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000_k1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_top-relative-expression-ranked_500	USP31 ZFHX4 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13	6.49e-05	421	69	8	gudmap_developingLowerUrinaryTract_e14.5_ bladder_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_top-relative-expression-ranked_500	USP31 ZFHX4 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13	7.16e-05	427	69	8	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_500	RIF1 ZFHX4 ZNF451 ERCC6L2 NPAS3 ZFHX3 ASXL2 PYGO1	7.40e-05	429	69	8	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#5_top-relative-expression-ranked_200	USP31 TENM4 BAZ1B MED13	7.53e-05	69	69	4	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_200_k5
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000_k-means-cluster#3	RIF1 ZFHX4 ATRX ARID4A CCDC186 BAZ1B BOD1L1 ASXL2	7.77e-05	432	69	8	Facebase_RNAseq_e10.5_Maxillary Arch_1000_K3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#1_top-relative-expression-ranked_500	USP31 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	1.05e-04	231	69	6	gudmap_developingLowerUrinaryTract_e14.5_ bladder_500_k1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#5_top-relative-expression-ranked_500	USP31 ERCC6L2 BAZ1B ASXL2 MED13	1.25e-04	149	69	5	gudmap_developingLowerUrinaryTract_e14.5_ urethra_500_k5
CoexpressionAtlas	DevelopingKidney_e15.5_S-shaped body_emap-27855_k-means-cluster#5_top-relative-expression-ranked_1000	C5orf22 ERCC6L2 BAZ1B ASXL2 MED13	1.37e-04	152	69	5	gudmap_developingKidney_e15.5_S-shaped body_1000_k5
CoexpressionAtlas	FacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1	RIF1 ATRX ARID4A ANKRD11 EXO1 BAZ1B MORC3 TGS1	1.37e-04	469	69	8	Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#4_top-relative-expression-ranked_500	RIF1 ZFHX4 ZNF451 ZFHX3 ASXL2 PYGO1	1.51e-04	247	69	6	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#3_top-relative-expression-ranked_500	RIF1 ZFHX4 ZFHX3 ASXL2 HDGFL3 PYGO1	1.58e-04	249	69	6	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500_k3
CoexpressionAtlas	dev gonad_e13.5_F_MeioticGermCell_Oct_k-means-cluster#2_top-relative-expression-ranked_1000	USP31 FANCB STK17B ZNF451 ERCC6L2 OTUD4 MORC3	1.69e-04	361	69	7	gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_k2_1000
CoexpressionAtlas	DevelopingKidney_e15.5_Ureteral Smooth Musc_emap-28812_top-relative-expression-ranked_1000	C5orf22 ZFHX4 ATRX CCDC186 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 RIMS1	1.86e-04	772	69	10	gudmap_developingKidney_e15.5_Ureteral Smooth Musc_1000
CoexpressionAtlas	kidney_adult_RenalCapsule_k-means-cluster#2_top-relative-expression-ranked_1000	IL16 DENND4A SPATS2L MTUS1 DOCK11 STK17B CRYBG3	1.93e-04	369	69	7	gudmap_kidney_adult_RenalCapsule_k2_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_200	USP31 TENM4 ZFHX4 BAZ1B MED13	2.06e-04	166	69	5	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_200
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000	USP31 TENM4 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	2.50e-04	385	69	7	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlas	DevelopingKidney_e14.5 whole kidney - Wnt4 KO_emap-6674_top-relative-expression-ranked_500	ZFHX4 DOCK11 ZNF451 ANKRD11 ZFHX3 GAB1 HDGFL3	2.62e-04	388	69	7	gudmap_developingKidney_e14.5 whole kidney - Wnt4 KO_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_top-relative-expression-ranked_1000	USP31 ZFHX4 ERCC6L2 NPAS3 OTUD4 BAZ1B ASXL2 MED13 PYGO1 TGS1	2.76e-04	811	69	10	gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_top-relative-expression-ranked_200	USP31 ZFHX4 ERCC6L2 NPAS3 BAZ1B	2.85e-04	178	69	5	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_200
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_1000	USP31 TENM4 ZFHX4 ERCC6L2 NPAS3 OTUD4 BAZ1B ZFHX3 ASXL2 MED13	2.96e-04	818	69	10	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000
CoexpressionAtlas	dev gonad_e13.5_F_MeioticGermCell_Oct_top-relative-expression-ranked_1000	USP31 FANCB RIF1 DENND4A STK17B ZNF451 ERCC6L2 EXO1 OTUD4 MORC3	3.01e-04	820	69	10	gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#5_top-relative-expression-ranked_1000	USP31 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13 TGS1	3.02e-04	397	69	7	gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_500	USP31 TENM4 ZFHX4 ERCC6L2 NPAS3 BAZ1B MED13	3.99e-04	416	69	7	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3	RIF1 USP51 ATRX ARID4A TGS1	4.03e-04	192	69	5	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_500	RIF1 ZFHX4 ZFHX3 ASXL2 RIMS1 HDGFL3 PYGO1	4.73e-04	428	69	7	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2	HIVEP1 ZZZ3 ATRX ARID4A DLGAP4 BAZ1B ZFHX3 ASXL2	4.75e-04	564	69	8	Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlas	DevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_k-means-cluster#5_top-relative-expression-ranked_1000	C5orf22 ERCC6L2 OTUD4 BAZ1B MED13	4.97e-04	201	69	5	gudmap_developingKidney_e15.5_Pelvic Mesenchyme_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#2_top-relative-expression-ranked_1000	USP31 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	5.29e-04	312	69	6	gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000_k2
CoexpressionAtlas	DevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_k-means-cluster#3_top-relative-expression-ranked_500	C5orf22 ERCC6L2 OTUD4 MED13	5.56e-04	116	69	4	gudmap_developingKidney_e15.5_Pelvic Mesenchyme_500_k3
CoexpressionAtlas	DevelopingKidney_e15.5_Medullary collecting duct_emap-28063_k-means-cluster#3_top-relative-expression-ranked_500	C5orf22 ERCC6L2 ASXL2 MED13	5.74e-04	117	69	4	gudmap_developingKidney_e15.5_Medullary collecting duct_500_k3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#3_top-relative-expression-ranked_1000	ZFHX4 ERCC6L2 ZFHX3 ASXL2	5.93e-04	118	69	4	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000_k3
CoexpressionAtlas	DevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_k-means-cluster#4_top-relative-expression-ranked_200	ERCC6L2 BAZ1B MED13	6.12e-04	51	69	3	gudmap_developingKidney_e15.5_ureter tip_flank cortic collct_200_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#1_top-relative-expression-ranked_1000	TENM4 ZFHX4 NPAS3 ZFHX3	6.32e-04	120	69	4	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k1
CoexpressionAtlas	facebase_RNAseq_e10.5_MaxArch_2500_K3	RIF1 IL16 ATRX ARID4A CTR9 CCDC186 ZFHX3 BOD1L1 ASXL2 BCAS1 HDGFL3 TGS1	6.48e-04	1252	69	12	facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e15.5_Urothelium_emap-28091_k-means-cluster#3_top-relative-expression-ranked_500	C5orf22 ERCC6L2 OTUD4 BAZ1B	6.72e-04	122	69	4	gudmap_developingLowerUrinaryTract_e15.5_Urothelium_500_k3
CoexpressionAtlas	DevelopingKidney_e15.5_Ureteral Smooth Musc_emap-28812_k-means-cluster#1_top-relative-expression-ranked_1000	ATRX CCDC186 ERCC6L2 NPAS3	6.93e-04	123	69	4	gudmap_developingKidney_e15.5_Ureteral Smooth Musc_1000_k1
CoexpressionAtlas	dev gonad_e13.5_M_GermCell_Oct_k-means-cluster#1_top-relative-expression-ranked_1000	FANCB RIF1 STK17B ZNF451 OTUD4 MORC3	7.43e-04	333	69	6	gudmap_dev gonad_e13.5_M_GermCell_Oct_k1_1000
CoexpressionAtlas	dev gonad_e11.5_F_PrimGermCell_Oct_k-means-cluster#3_top-relative-expression-ranked_1000	RIF1 C5orf22 STK17B ZNF451 EXO1 OTUD4 MORC3	7.53e-04	463	69	7	gudmap_dev gonad_e11.5_F_PrimGermCell_Oct_k3_1000
CoexpressionAtlas	DevelopingKidney_e15.5_Endothelial cells_emap-29977_top-relative-expression-ranked_1000	USP31 IL16 ATRX ECSCR ERCC6L2 BAZ1B ARHGAP25 ASXL2 MED13	7.92e-04	764	69	9	DevelopingKidney_e15.5_Endothelial cells_emap-29977_1000
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#1_top-relative-expression-ranked_1000	ZFHX4 EXO1 ZFHX3 TGS1	8.52e-04	130	69	4	gudmap_developingGonad_e12.5_ovary_k1_1000
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_1000	C5orf22 ATRX CCDC186 ZNF451 ERCC6L2 OTUD4 BAZ1B ASXL2 MED13	8.68e-04	774	69	9	gudmap_developingKidney_e15.5_cortic collect duct_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#1	TCF20 ATRX ARID4A CCDC186 ERCC6L2 BAZ1B ANKHD1 EIF2AK3 HDGFL3	9.17e-04	780	69	9	Facebase_RNAseq_e10.5_Lateral Nasal Eminence_2500_K1
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5	RIF1 ZZZ3 USP51 ATRX ARID4A BAZ1B BOD1L1 ASXL2	9.66e-04	629	69	8	Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlas	DevelopingKidney_e14.5 whole kidney - Wnt4 KO_emap-6674_top-relative-expression-ranked_1000	HIVEP1 ZFHX4 DOCK11 ZNF451 ANKRD11 ZFHX3 GAB1 ZNF286A HDGFL3	1.01e-03	791	69	9	gudmap_developingKidney_e14.5 whole kidney - Wnt4 KO_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#1_top-relative-expression-ranked_200	USP31 ERCC6L2 BAZ1B	1.03e-03	61	69	3	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k1_200
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#3_top-relative-expression-ranked_1000	ZFHX4 NPAS3 ASXL2 PYGO1	1.06e-03	138	69	4	gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000_k3
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000	RIF1 TENM4 ATRX DOCK11 ZNF451 ANKRD11 EXO1 ANKHD1 TGS1	1.15e-03	806	69	9	gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_500	TENM4 ZFHX4 NPAS3	1.19e-03	64	69	3	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500_k4
CoexpressionAtlas	DevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_1000	RIF1 TENM4 ZFHX4 ATRX DOCK11 ZNF451 EXO1 ZFHX3 TGS1	1.25e-03	815	69	9	gudmap_developingGonad_e11.5_ovary + mesonephros_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000	RIF1 USP51 ATRX ARID4A NPAS3 EXO1 BAZ1B BOD1L1 ANKHD1 TGS1	1.28e-03	989	69	10	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlas	kidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_1000	MTUS1 NPAS3 CRYBG3	1.30e-03	66	69	3	gudmap_kidney_P2_CapMes_Crym_k3_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#4_top-relative-expression-ranked_1000	TENM4 ZFHX4 NPAS3 PYGO1	1.34e-03	147	69	4	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k4_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_top-relative-expression-ranked_1000	USP31 SPATS2L ZFHX4 ARID4A STK17B ERCC6L2 NPAS3 OTUD4 BAZ1B	1.37e-03	826	69	9	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_P1_bladder_J_emap-30374_k-means-cluster#1_top-relative-expression-ranked_1000	ERCC6L2 OTUD4 RIMS1 MED13	1.41e-03	149	69	4	gudmap_developingLowerUrinaryTract_P1_bladder_J_1000_k1
CoexpressionAtlas	DevelopingLowerUrinaryTract_P1_ureter_emap-30363_k-means-cluster#4_top-relative-expression-ranked_1000	USP31 OTUD4 ASXL2 MED13	1.48e-03	151	69	4	gudmap_developingLowerUrinaryTract_P1_ureter_1000_k4
CoexpressionAtlas	dev gonad_e11.5_M_PrimGermCell_Oct_k-means-cluster#2_top-relative-expression-ranked_1000	RIF1 ZNF451 EXO1 OTUD4 MORC3	1.52e-03	258	69	5	gudmap_dev gonad_e11.5_M_PrimGermCell_Oct_k2_1000
CoexpressionAtlas	DevelopingKidney_e15.5_Endothelial cells_emap-29965_top-relative-expression-ranked_500	USP31 IL16 ECSCR ERCC6L2 ARHGAP25 ASXL2	1.55e-03	384	69	6	gudmap_developingKidney_e15.5_Endothelial cells_500
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#3_top-relative-expression-ranked_1000	TENM4 ATRX DOCK11 ZNF451 ANKRD11	1.55e-03	259	69	5	gudmap_developingGonad_e12.5_epididymis_k3_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_F-vs-M_top280_280	TENM4 ATF7IP ZFHX3 RIMS1 ZNF286A	1.57e-03	260	69	5	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_250_F-vs-M
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#2_top-relative-expression-ranked_500	ZFHX4 ERCC6L2 ZFHX3	1.67e-03	72	69	3	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500_k2
CoexpressionAtlas	dev gonad_e12.5_M_GermCellTestis_Oct_k-means-cluster#2_top-relative-expression-ranked_1000	FANCB STK17B ZNF451 OTUD4 MORC3	1.74e-03	266	69	5	gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_k2_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_M-2fold-vs-F_top305_305	USP31 ATRX NPAS3 OTUD4 ASXL2	1.74e-03	266	69	5	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_250_M-vs-F-2X
CoexpressionAtlas	kidney_P1_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_1000	MTUS1 NPAS3 CRYBG3	1.88e-03	75	69	3	gudmap_kidney_P1_CapMes_Crym_k3_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#5_top-relative-expression-ranked_200	USP31 BAZ1B MED13	1.88e-03	75	69	3	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k5_200
CoexpressionAtlas	DevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_top-relative-expression-ranked_500	C5orf22 ATRX ERCC6L2 OTUD4 BAZ1B MED13	1.95e-03	402	69	6	gudmap_developingKidney_e15.5_anlage of loop of Henle_500
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_500	C5orf22 ERCC6L2 OTUD4 MED13	1.96e-03	163	69	4	gudmap_developingKidney_e15.5_cortic collect duct_500_k4
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#3_top-relative-expression-ranked_1000	TENM4 ATRX DOCK11 ZNF451 ANKRD11	2.01e-03	275	69	5	gudmap_developingGonad_e14.5_ epididymis_1000_k3
CoexpressionAtlas	dev gonad_e12.5_F_GermCellOvary_Oct_top-relative-expression-ranked_500	FANCB RIF1 STK17B ZNF451 EXO1 OTUD4	2.05e-03	406	69	6	gudmap_dev gonad_e12.5_F_GermCellOvary_Oct_500
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial-Lgr5+_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ARHGEF28 MTUS1 ZFHX3 CRYBG3 NKAPL MED13	2.90e-07	168	71	6	d69452e2cfeb74023b5cf3d09064d7dcad0008ec
ToppCell	(00)_Basal-(2)_GFP_FOXI1\|(00)_Basal / shred by cell type by condition	SPATS2L ATRX ARID4A CCDC186 ANKRD11 BOD1L1	7.83e-07	199	71	6	19674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell	(04)_Interm._basal>secr.-(2)_GFP_FOXI1\|(04)_Interm._basal>secr. / shred by cell type by condition	ATRX MTUS1 CCDC186 ANKRD11 BOD1L1 BCAS1	7.83e-07	199	71	6	53ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	ATRX MTUS1 CCDC186 ANKRD11 BOD1L1 BCAS1	7.83e-07	199	71	6	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	(05)_Secretory-(2)_GFP_FOXI1\|(05)_Secretory / shred by cell type by condition	ATRX MTUS1 CCDC186 ANKRD11 BOD1L1 BCAS1	7.83e-07	199	71	6	d72d87e1e530ed894c0ad5e7b5b2b1d6b59fa098
ToppCell	(01)_IL1RL1+-(2)_GFP_FOXI1\|(01)_IL1RL1+ / shred by cell type by condition	SPATS2L ATRX ARID4A CCDC186 ANKRD11 BOD1L1	7.83e-07	199	71	6	a2f7d0cabf35b80fe239fae34a77bf9344d5d743
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	DENND4A ATF7IP ANKRD11 EIF2AK3 MED13	1.26e-05	188	71	5	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-C\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ATF7IP RIMS1 CRYBG3 ZBTB18 ZNF286A	1.26e-05	188	71	5	e239bcdbd210a398a5850cb6fbf171d402f45a4f
ToppCell	TCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6\|TCGA-Prostate / Sample_Type by Project: Shred V9	ATRX CTR9 ASXL2 CRYBG3 MED13	1.43e-05	193	71	5	abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCell	droplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RIF1 ATRX ANKRD11 BOD1L1 UNC80	1.50e-05	195	71	5	3e519cffa6144a62b06124642a14c9ff39b76554
ToppCell	droplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RIF1 ATRX ANKRD11 BOD1L1 UNC80	1.50e-05	195	71	5	7796ea9247f4c63762f0de8490fed08b9717fa23
ToppCell	TCGA-Skin-Metastatic-Melanoma\|TCGA-Skin / Sample_Type by Project: Shred V9	DENND4A ATRX DOCK11 ZFHX3 ARHGAP25	1.61e-05	198	71	5	af4fb9eb2295c7b90624b38ba25619aa15254efa
ToppCell	TCGA-Skin-Metastatic\|TCGA-Skin / Sample_Type by Project: Shred V9	DENND4A ATRX DOCK11 ZFHX3 ARHGAP25	1.61e-05	198	71	5	ad39cce004867f083f8da1954e0cf5a263815184
ToppCell	(11)_FOXN4+-(2)_GFP_FOXI1\|(11)_FOXN4+ / shred by cell type by condition	ATRX CCDC186 ANKRD11 BOD1L1 TGS1	1.61e-05	198	71	5	76d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCell	TCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma\|TCGA-Skin / Sample_Type by Project: Shred V9	DENND4A ATRX DOCK11 ZFHX3 ARHGAP25	1.61e-05	198	71	5	62cbf4b29e8af4983fb47a17f96da62682a5137e
ToppCell	(02)_MMP9/10+-(2)_GFP_FOXI1\|(02)_MMP9/10+ / shred by cell type by condition	SPATS2L ATRX CCDC186 ANKRD11 BOD1L1	1.65e-05	199	71	5	18a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCell	(09)_Interm._secr.>cil.-(2)_GFP_FOXI1\|(09)_Interm._secr.>cil. / shred by cell type by condition	ATRX MTUS1 CCDC186 ANKRD11 BOD1L1	1.65e-05	199	71	5	fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	ATRX STK17B ATF7IP ANKRD11 BOD1L1	1.69e-05	200	71	5	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	saliva-Severe-critical_progression_d12-22_with-steroid-Myeloid-Monocytic-Classical_Monocyte-Mono_c3-CD14-VCAN\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	RAE1 STK17B BOD1L1 ASXL2	1.91e-05	99	71	4	a815a887094204de30b299e8907e81ad9a39c016
ToppCell	(08)_Brush+PNEC-(2)_GFP_FOXI1\|(08)_Brush+PNEC / shred by cell type by condition	MTUS1 CCDC186 ANKRD11 BOD1L1	7.02e-05	138	71	4	817e3f639604ea95adae01e8685ffaa2e0aff7a8
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	ARHGEF28 SYT6 ZFHX3 ARHGAP25	1.30e-04	162	71	4	58da6bc04cdac0002b0e6a751c96ff95e1a7f70f
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT-L6_CT_VISp_Ctxn3_Brinp3\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	ARHGEF28 SYT6 ZFHX3 ARHGAP25	1.34e-04	163	71	4	b0aa4a620bd58011225b42ea6dda04e3101ba342
ToppCell	Children_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)-D046\|Children_(3_yrs) / Lineage, Cell type, age group and donor	NPAS3 RIMS1 MARCHF4 UNC80	1.37e-04	164	71	4	be49af6335f2505065cde2cb9800e4a5516811b1
ToppCell	Children_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	NPAS3 RIMS1 MARCHF4 UNC80	1.47e-04	167	71	4	c87ebfa8c3284ad33579190e148c95bcaf670d17
ToppCell	10x_3'_v2v3-Non-neoplastic-Lymphoid-CD4/CD8-Reg_T-E\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ECSCR STK17B ESR2 TGS1	1.50e-04	168	71	4	187b98664843a304406f086ea696adbf32283d07
ToppCell	Children_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)\|Children_(3_yrs) / Lineage, Cell type, age group and donor	NPAS3 RIMS1 MARCHF4 UNC80	1.53e-04	169	71	4	b6b5bb6408c1305a00719e1b88a5e1202081faf3
ToppCell	droplet-Liver-LIVER-NPC-1m-Lymphocytic-macrophage/monocyte\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RAE1 ARID4A DOCK11 GRAMD2B	1.57e-04	170	71	4	3ad9f950b87ee98f025ab9b4a8ed551e6a9b4764
ToppCell	facs-Lung-nan-3m-Lymphocytic\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL16 DOCK11 STK17B GRAMD2B	1.64e-04	172	71	4	7af0713c40ea48f1e92c859c4fc4d8f0137c4415
ToppCell	Primary_Motor_Cortex_(M1)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT_L6_FEZF2-Exc_L5-6_FEZF2_ANKRD20A1\|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	HIVEP1 SYT6 ARHGAP25 CRYBG3	1.72e-04	174	71	4	99eb5e1aee136c7039e23b68a43a0fa3d775859f
ToppCell	T_cells-Tph_and_Tfh\|T_cells / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues	SPATS2L USP51 MTUS1 GRAMD2B	1.79e-04	176	71	4	56c055488e34605d32562571a2fee621b47c9441
ToppCell	droplet-Lung-18m-Hematologic-myeloid-classical_monocyte_proliferating-classical_monocyte_proliferating_l2\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	ERCC6L2 EXO1 BCAS1 NKAPL	1.79e-04	176	71	4	1510cdfcfb46ce1196a1220c07fb5f3986c81b78
ToppCell	Fetal_29-31_weeks-Epithelial-lung_goblet_cell\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	ARHGEF28 GRAMD2B RIMS1 BCAS1	1.83e-04	177	71	4	a4c001a8e44142babf9f24dfe6f7b73a70b11b16
ToppCell	Fetal_29-31_weeks-Epithelial-lung_goblet_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	ARHGEF28 GRAMD2B RIMS1 BCAS1	1.83e-04	177	71	4	363e07b0f347f3716d530a28ead854b98e27d37c
ToppCell	droplet-Limb_Muscle-MUSCLE-30m\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX CCDC186 ANKRD11 BAZ1B	1.87e-04	178	71	4	01dafd19de04eff459253eaa9a35debf8f3deedf
ToppCell	Adult-Epithelial-lung_goblet_cell\|Adult / Lineage, Cell type, age group and donor	ARHGEF28 GRAMD2B RIMS1 BCAS1	1.91e-04	179	71	4	1fc1f252ca943a2f649d1e627f56acbf15f8e058
ToppCell	ILEUM-non-inflamed-(7)_Lymphatics\|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	USP31 MTUS1 ARID4A ECSCR	1.91e-04	179	71	4	99777a8931356d1206b8ab22aaa1b1d5a600b809
ToppCell	Epithelial-lung_neuroendocrine_cell_(PNEC)\|World / Lineage, Cell type, age group and donor	NPAS3 RIMS1 MARCHF4 UNC80	2.04e-04	182	71	4	57bf4ffb304324e2e392e196336a530d9f78fe0d
ToppCell	droplet-Marrow-nan-3m-Hematologic-nan\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX GRAMD2B BOD1L1 HDGFL3	2.04e-04	182	71	4	e78ba2c5cae480c16a596ce7c3bf2d480becacf4
ToppCell	droplet-Marrow-nan-3m-Hematologic\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX GRAMD2B BOD1L1 HDGFL3	2.04e-04	182	71	4	1710eab3037a87609d21838be2d2d29c3bc36651
ToppCell	Epithelial-lung_goblet_cell\|World / Lineage, Cell type, age group and donor	ARHGEF28 GRAMD2B RIMS1 BCAS1	2.08e-04	183	71	4	940cbe298e9c53b5622af09264586ed823d3141f
ToppCell	facs-Limb_Muscle-ForelimbandHindlimb-3m-Lymphocytic-B_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL16 STK17B GRAMD2B ARHGAP25	2.08e-04	183	71	4	20f7b6ec2462032eda957a893ca76d5a5a01333d
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-4\|TCGA-Pancreas / Sample_Type by Project: Shred V9	ZFHX4 DOCK11 CRYBG3 PYGO1	2.12e-04	184	71	4	67164bb6bcae7322cb89b585c7aa10bce35b0ecd
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_Arw_fibro_(16)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	TENM4 NPAS3 ZFHX3 UNC80	2.17e-04	185	71	4	7dcdc009c5681ee05dd18968f7e85c3403fe34af
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	TENM4 ZFHX4 MTUS1 RIMS1	2.17e-04	185	71	4	6712512100ccef456d2e2bd201d0987986c92ac9
ToppCell	droplet-Mammary_Gland-nan-3m-Lymphocytic-B_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DENND4A STK17B ARHGAP25 EIF2AK3	2.17e-04	185	71	4	bf4dbb5f139566750e50a81eb062ed8b9e5786c3
ToppCell	ILEUM-inflamed-(7)_Lymphatics\|inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	USP31 MTUS1 ARID4A ECSCR	2.17e-04	185	71	4	d711dd2e91cfee723dae1ccb2b910b8cf3becc3b
ToppCell	facs-Brain_Non-Myeloid-Cerebellum\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL16 RIMS1 ZBTB18 UNC80	2.17e-04	185	71	4	c083a4974590b9ed3ecafedd3e9cdebc5047fe39
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal-interneuron\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL16 RIMS1 ZBTB18 UNC80	2.21e-04	186	71	4	d1d01ce46e62944aa9864eda47e8401b5f0d2bdc
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1\|TCGA-Pancreas / Sample_Type by Project: Shred V9	ATRX ARID4A BOD1L1 ASXL2	2.21e-04	186	71	4	03db813598b67b1e08f759758a1c2023396921fa
ToppCell	Fetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	NPAS3 RIMS1 MARCHF4 UNC80	2.21e-04	186	71	4	b45cce768e4bf91da194fd9660cab7520dfb15ac
ToppCell	-Unknown-Endothelial-Myofibroblast\| / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	MTUS1 ATF7IP ERCC6L2 GAB1	2.31e-04	188	71	4	6468fa95ad0395395301115286f2d8c0df5d3882
ToppCell	-Unknown-Endothelial\| / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	MTUS1 ATF7IP ERCC6L2 GAB1	2.31e-04	188	71	4	7a81ac5c79c3eb26639b52d2b9fd5e7ef9798fd6
ToppCell	-Unknown\| / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	MTUS1 ATF7IP ERCC6L2 GAB1	2.31e-04	188	71	4	9cb718bfe1358c6fd842f096e228eb0abb9aefc6
ToppCell	droplet-Limb_Muscle-MUSCLE-1m-Lymphocytic-B_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL16 STK17B ARHGAP25 EIF2AK3	2.31e-04	188	71	4	f72bc8965872da4d7d7990895beadbe36752314f
ToppCell	ASK452-Immune-Mast_cell\|ASK452 / Donor, Lineage and Cell class of Lung cells from Dropseq	DENND4A STK17B CTR9 ARHGAP25	2.31e-04	188	71	4	840215e16cff90f821f776186284eafcf2350690
ToppCell	Fetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	NPAS3 RIMS1 MARCHF4 UNC80	2.31e-04	188	71	4	c4c3b21ab723b0e9beff9ec84f8d68485f771528
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_B-B_cell-B_c01-TCL1A\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP BOD1L1 EIF2AK3	2.35e-04	189	71	4	b13f315f617840eb5143a4e8a33a657c20365c21
ToppCell	(1)_Osterolineage_cells-(10)_OLC-1\|World / Cell class and subclass of bone marrow stroma cells in homeostatis	TENM4 ZFHX4 STK17B SYT6	2.35e-04	189	71	4	46c5b975fb9d33017f2d9b7770d45a8bdf95baa2
ToppCell	COVID-19-lung-Secretory\|lung / Disease (COVID-19 only), tissue and cell type	ARHGEF28 MTUS1 GRAMD2B RIMS1	2.35e-04	189	71	4	84d48e3ed25bebb8bb8074b3a2c5e2e88cff7f25
ToppCell	Fetal_29-31_weeks-Immune-B_cell-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DENND4A STK17B ARHGAP25 EIF2AK3	2.40e-04	190	71	4	424550418c1bd4eb070cf3c41cf09fa9d89aef37
ToppCell	COVID-19-Epithelial_cells-Airway_goblet\|COVID-19 / group, cell type (main and fine annotations)	ARHGEF28 MTUS1 GRAMD2B RIMS1	2.40e-04	190	71	4	51ca9ef4df3220487152fcf684147730637c7cc1
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX CCDC186 MSL3 ANKRD11	2.45e-04	191	71	4	60c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX CCDC186 MSL3 ANKRD11	2.45e-04	191	71	4	09db184cb90fe282a14474d7217068c58092c6f8
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX CCDC186 MSL3 ANKRD11	2.45e-04	191	71	4	973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_B-B_cell\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP ARHGAP25 EIF2AK3	2.50e-04	192	71	4	446c61c0d6ba89c619efe87ee495951299953981
ToppCell	facs-Aorta-Heart-3m\|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RIF1 ATRX ZFHX3 BOD1L1	2.50e-04	192	71	4	1ccc47792edf9ee23501c8e2165d11271636b66a
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP ARHGAP25 EIF2AK3	2.55e-04	193	71	4	bbea475d2c4c7b29674ff302529f8f83dd666dcb
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	MTUS1 DOCK11 NPAS3 PYGO1	2.55e-04	193	71	4	9f9eb241b0b82a6f12de6921c3acf6fed7cf65bb
ToppCell	nucseq\|World / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	DENND4A ANKRD11 ANKHD1 PPP6R3	2.55e-04	193	71	4	779276e775cb2492e8dd36436295a536084a6415
ToppCell	Mid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_SST\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	VAX1 DOCK11 NPAS3 PYGO1	2.55e-04	193	71	4	2189da4b727e25e62669d7b9257f06493be21a27
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B\|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP ARHGAP25 EIF2AK3	2.55e-04	193	71	4	ac227ddabfb3f021b1b39dba73f898517cd5a58e
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	HIVEP1 ARHGEF28 MED13 PPP6R3	2.55e-04	193	71	4	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B-B_cell\|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP ARHGAP25 EIF2AK3	2.55e-04	193	71	4	f4135615ee0118eec9e221becdd67888e0c2a112
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL16 RIMS1 ZBTB18 UNC80	2.55e-04	193	71	4	5fb7808dd971c1cc64c2bd4f8f1de646fb2d77f4
ToppCell	(1)_Osterolineage_cells\|World / Cell class and subclass of bone marrow stroma cells in homeostatis	TENM4 ZFHX4 STK17B SYT6	2.55e-04	193	71	4	035eeea9f77c4bf9cd85f07fa791b6c857be76b5
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27\|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP ARHGAP25 EIF2AK3	2.60e-04	194	71	4	5cd72330c9d9bb21b6c9d5d35085eade101486d1
ToppCell	Mid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_SST-Inh_L3-5_SST_MAFB\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	VAX1 DOCK11 NPAS3 PYGO1	2.60e-04	194	71	4	83863da11dfbe59b2d0a2c08db40b537c150588c
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	IL16 DENND4A BOD1L1 ARHGAP25	2.60e-04	194	71	4	d852aebf7a763b9a776c4570711f0c759f591910
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_B-B_cell\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A BOD1L1 ARHGAP25 ZBTB18	2.65e-04	195	71	4	481989d2e5bd2582da3d86b0155c4d6615317067
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_B\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A ATF7IP ARHGAP25 EIF2AK3	2.65e-04	195	71	4	0c49d22c348aec6d8a1a976e7c88d0a3b48a4244
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_B\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DENND4A BOD1L1 ARHGAP25 ZBTB18	2.65e-04	195	71	4	6108a27523d1b93a7fbe35cb95704a5ad9071e3c
ToppCell	COVID-19_Severe-PLT_4\|World / Disease Group and Platelet Clusters	DENND4A ARID4A ATF7IP ZNF451	2.70e-04	196	71	4	ad43efdd4d73b6615f65f06a315b33576e317473
ToppCell	control-Lymphoid\|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	IL16 DOCK11 STK17B ARHGAP25	2.70e-04	196	71	4	8ed172bb3a95f09722476f0880ae246561777d98
ToppCell	distal-Endothelial-Lymphatic-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	ZFHX4 MTUS1 ECSCR MARCHF4	2.70e-04	196	71	4	b0f23dc802a2c2a56a08d398a464ea78b58ade4c
ToppCell	systemic_lupus_erythematosus-flare\|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex	ATRX ATF7IP MSL3 ARHGAP25	2.81e-04	198	71	4	4c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCell	distal-1-Endothelial-Lymphatic\|1 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	ZFHX4 MTUS1 ECSCR MARCHF4	2.81e-04	198	71	4	b6fea363463c8dd7e6780c085ece4900266a6286
ToppCell	COVID-19_Severe-PLT_4\|COVID-19_Severe / Disease Group and Platelet Clusters	DENND4A ARID4A ATF7IP ZNF451	2.81e-04	198	71	4	abfddbee99ef8c7719e6e6f62571e9be030e4acf
ToppCell	PBMC-Mild\|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)	SPATS2L STK17B ANKRD11 BOD1L1	2.81e-04	198	71	4	44417089b62056269cac38d3134ff209c05b7007
ToppCell	Bronchial-NucSeq-Epithelial-Epi_submucosal-gland-SMG_Duct\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	NPAS3 RIMS1 NKAPL UNC80	2.81e-04	198	71	4	1fe60443c11d34b6d2671af8f06e0dedc8d1558b
ToppCell	PBMC-Mild\|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SPATS2L STK17B ANKRD11 BOD1L1	2.81e-04	198	71	4	28ef3fc4c17dcb765537b75917f7db78baa522db
ToppCell	mild-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	ATRX ATF7IP ZNF451 ANKRD11	2.86e-04	199	71	4	f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Parietal_and_Temporal-6\|World / Primary Cells by Cluster	ATRX ARID4A CCDC186 ZBTB18	2.86e-04	199	71	4	1b1bccf4293f11048709d15a3c892c0edf3da3d2
ToppCell	Transplant_Alveoli_and_parenchyma-Mesenchymal-Mesothelium\|Mesenchymal / Tissue, Lineage and Cell class of Lung Cells from 10X	SPATS2L HTR2A ZFHX4 NPAS3	2.86e-04	199	71	4	6cfefd81e8a1a883fb4279ac4ab0b298ed2a0817
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Parietal_and_Temporal\|World / Primary Cells by Cluster	ATRX ARID4A CCDC186 ZBTB18	2.86e-04	199	71	4	4bee94c116c0da5eba951cb4cea7cc9dcdd6e30f
ToppCell	Bronchial-NucSeq-Stromal-Fibroblastic-Fibro_perichondrial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TENM4 ZFHX4 NPAS3 ZFHX3	2.86e-04	199	71	4	abd6117f8a3d7e798d8471c16d97b34aaf50fc9c
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1--L1-3\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VAX1 DOCK11 CRYBG3 MARCHF4	2.92e-04	200	71	4	f3c710f0fc8a7bfb5371d1aff6e3d8f266953153
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-STK32A-\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VAX1 DOCK11 NPAS3 PYGO1	2.92e-04	200	71	4	6a44439e4a7ce3627271375b04cfcfb9467218f4
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1-\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VAX1 DOCK11 CRYBG3 MARCHF4	2.92e-04	200	71	4	70a06fd7fb8de2c8ec3e3182e4476ced049daeae
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-STK32A\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VAX1 DOCK11 NPAS3 PYGO1	2.92e-04	200	71	4	8d51b4f7b7002ee51401ebe5eaca1e8f04bfadd5
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VAX1 DOCK11 CRYBG3 MARCHF4	2.92e-04	200	71	4	1639982d9d994918f7912d12d9d7cfcbc9da4145
Drug	geldanamycin	FANCB C5orf22 ZFHX4 ATRX CCDC186 ZNF655 ERCC6L2 OTUD4 BOD1L1 TNFRSF10D MED13 PYGO1	1.34e-09	371	70	12	ctd:C001277
Disease	oleoyl-oleoyl-glycerol (18:1/18:1) [1] measurement	BAZ1B BUD13	7.80e-05	6	68	2	EFO_0800497
Disease	total cholesterol measurement, response to escitalopram, response to citalopram	ARHGAP25 RIMS1	1.45e-04	8	68	2	EFO_0004574, EFO_0006329, EFO_0007871
Disease	sexual dimorphism measurement	ESR2 DLGAP4 ANKRD11 OTUD4 BAZ1B BUD13 ZFHX3 ASXL2 ANKS3 PPP6R3	2.12e-04	1106	68	10	EFO_0021796
Disease	oleoyl-linoleoyl-glycerol (18:1/18:2) [1] measurement	BAZ1B BUD13	2.84e-04	11	68	2	EFO_0800332
Disease	autism spectrum disorder (implicated_via_orthology)	HTR2A TCF20 DLGAP4 RIMS1	4.27e-04	152	68	4	DOID:0060041 (implicated_via_orthology)
Disease	attention deficit hyperactivity disorder, substance abuse, antisocial behaviour measurement	HIVEP1 SPATS2L TENM4 TCF20 ARID4A NPAS3 ASCL4 ZFHX3	5.00e-04	801	68	8	EFO_0003888, EFO_0007052, MONDO_0002491
Disease	synophrys measurement	ZFHX4 ERCC6L2 PPP6R3	5.27e-04	68	68	3	EFO_0007906
Disease	hair colour measurement	IL16 TENM4 DLGAP4 ANKRD11 ASXL2 BCAS1 PPP6R3	5.33e-04	615	68	7	EFO_0007822
Disease	Manic Disorder	TENM4 HTR2A RIMS1	5.98e-04	71	68	3	C0024713
Disease	age at menopause	RIF1 ZFHX4 EXO1 BOD1L1 HDGFL3	6.69e-04	302	68	5	EFO_0004704
Disease	intellectual disability (implicated_via_orthology)	ATRX ATF7IP BOD1L1	7.02e-04	75	68	3	DOID:1059 (implicated_via_orthology)
Disease	Manic	TENM4 HTR2A RIMS1	7.87e-04	78	68	3	C0338831
Disease	Depression, Bipolar	TENM4 HTR2A RIMS1	8.17e-04	79	68	3	C0005587
Disease	Hypertriglyceridemia	BAZ1B BUD13	8.72e-04	19	68	2	EFO_0004211
Disease	mean corpuscular hemoglobin concentration	RIF1 DENND4A ARID4A DLGAP4 EXO1 OTUD4 ASXL2 MED13 PPP6R3	9.50e-04	1105	68	9	EFO_0004528
Disease	chronic obstructive pulmonary disease	SPATS2L ARHGEF28 TENM4 DSPP ERCC6L2 NPAS3 OTUD4	1.03e-03	688	68	7	EFO_0000341
Disease	osteoporosis (biomarker_via_orthology)	DSPP ESR2	1.17e-03	22	68	2	DOID:11476 (biomarker_via_orthology)
Disease	obsessive-compulsive disorder, attention deficit hyperactivity disorder, Tourette syndrome, unipolar depression, bipolar disorder, autism spectrum disorder, schizophrenia, anorexia nervosa	TCF20 ESR2 NPAS3 RIMS1	1.19e-03	200	68	4	EFO_0003756, EFO_0003761, EFO_0003888, EFO_0004242, EFO_0004895, MONDO_0004985, MONDO_0005090, MONDO_0005351
Disease	malignant astrocytoma (is_marker_for)	IL16 ATRX	1.28e-03	23	68	2	DOID:3069 (is_marker_for)
Disease	smoking status measurement	SPATS2L TENM4 TCF20 STK17B ZNF655 NPAS3 ZFHX3 RIMS1 HDGFL3	1.33e-03	1160	68	9	EFO_0006527
Disease	low density lipoprotein cholesterol measurement, response to escitalopram, response to citalopram	ZFHX3 RIMS1	1.40e-03	24	68	2	EFO_0004611, EFO_0006329, EFO_0007871
Disease	inflammatory bowel disease (implicated_via_orthology)	IL16 ESR2	1.52e-03	25	68	2	DOID:0050589 (implicated_via_orthology)
Disease	obesity (implicated_via_orthology)	ZFHX4 ESR2 ZFHX3 MED13	1.55e-03	215	68	4	DOID:9970 (implicated_via_orthology)
Disease	isthmus cingulate cortex volume measurement	TENM4 TCF20	1.64e-03	26	68	2	EFO_0010310
Disease	Psychotic Disorders	TENM4 HTR2A NPAS3	1.66e-03	101	68	3	C0033975
Disease	bipolar disorder	SPATS2L TENM4 TCF20 NPAS3 RIMS1 ANKHD1	2.14e-03	577	68	6	MONDO_0004985
Disease	caudate nucleus volume	NPAS3 ZFHX3	2.18e-03	30	68	2	EFO_0004830

Protein segments in the cluster

Peptide	Gene	Start	Entry
DSTSVQDFSKAESCK	ZNF286A	121	Q9HBT8
KAGNESTSSTCKNEA	BHLHB9	91	Q6PI77
QLDSKGDCQKATDSD	BUD13	341	Q9BRD0
GEDSCAKTDTGSENS	CCDC186	76	Q7Z3E2
TANSEGKSDSCSSDS	ARID4A	686	P29374
KRSDKFCSSESESES	ANKRD11	471	Q6UB99
DFSCSKSDGSDTTEQ	CRYBG3	436	Q68DQ2
ESECSDKQTIDSSSK	CRYBG3	471	Q68DQ2
SGCDNASSKEEPKTN	EIF2AK3	811	Q9NZJ5
KSDGACDSPSSDKEN	BAZ1B	151	Q9UIG0
QENSSADTACKADDS	GZF1	661	Q9H116
ASKDNSDGVNEKVSC	HTR2A	456	P28223
DNDKSDSGKGKSDSS	DSPP	536	Q9NZW4
SDTQDANDSSCKSSE	DLGAP4	716	Q9Y2H0
CKNATGESSSSKEDD	ASXL2	1166	Q76L83
DKKGSDCSSLSESES	DENND4A	931	Q7Z401
DDGSKVFTASCDKTA	RAE1	96	P78406
ISDSEDDSCKSKTAA	OTUD4	201	Q01804
DDSCKSKTAAAAADV	OTUD4	206	Q01804
ESSKDSCKNDLDTSH	ARHGEF28	1641	Q8N1W1
ECSPAEDSKSKEGSQ	ESR2	511	Q92731
DKASSSNSACETGSV	MTUS1	616	Q9ULD2
ADSAKSTSSETDCND	GAB1	201	Q13480
TQETTDKSADDAGCQ	MORC3	681	Q14149
CNAKTSDDGSSPDEK	IL16	26	Q14005
KDENDENSLSSSSDC	MSL3	121	Q8N5Y2
ENSLSSSSDCSENKD	MSL3	126	Q8N5Y2
GSSKQEKESSAEDCG	LHX4	236	Q969G2
CKEEENKSSSEGGDA	HDGFL3	171	Q9Y3E1
SCDNVSAKSSDSDVS	RIMS1	1331	Q86UR5
QGKDDNTSSAEEKEC	FANCB	431	Q8NB91
GTEKGSKDTDICSSA	BOD1L1	1936	Q8NFC6
KSTGKGDSCDSSEDK	ATRX	1066	P46100
KKCTDAFSDSSSIGS	CEFIP	6	Q711Q0
EKDEDSSSLCSQKGG	DOCK11	151	Q5JSL3
ASTNCDSSSEGLEKD	C5orf22	191	Q49AR2
SGLSESCSTANGEKD	ECSCR	166	Q19T08
SDSDEDEQRKKCASS	CTR9	1041	Q6PD62
DEQRKKCASSESDSD	CTR9	1046	Q6PD62
DASVSKKAADSTSQC	ATF7IP	941	Q6VMQ6
LSSASSDDFCKEKTE	MARCHF4	131	Q9P2E8
SNEDSDHACKSSARK	ANKS3	371	Q6ZW76
RAECNSDGESKASSA	ASCL4	146	Q6XD76
ETKCKAVEDSDGNTA	ERCC6L2	811	Q5T890
SSFDGASLASDKNDC	GRAMD2B	71	Q96HH9
SEEINGKDSSCQTSD	BCAS1	461	O75363
GKDSSCQTSDSTEKT	BCAS1	466	O75363
NAAAGKDCSKDSDDV	MAP3K4	881	Q9Y6R4
RGAADACTTEKSNKS	PYGO1	311	Q9Y3Y4
SVDGEDAKSEATKSC	SYT6	216	Q5T7P8
CEKDSSSTDSANEKP	SPATS2L	111	Q9NUQ6
EKSSLSNNECGSLDK	RIF1	1146	Q5UIP0
SKSSCNGTCGDREDK	STK17B	326	O94768
NCESLTSDSAKDSDS	NPAS3	571	Q8IXF0
SANGSDDKASCKESK	MED13	801	Q9UHV7
CLSSDGGEQDKTKAS	REELD1	316	A0A1B0GV85
KLSQCSSKDSDSEES	EXO1	691	Q9UQ84
SSKDSDSEESDCNIK	EXO1	696	Q9UQ84
ACDKDGQTDSAAEES	BRPF1	851	P55201
LDSTDCNSESSSGGK	ANKHD1	1596	Q8IWZ3
KESSDSSCKDSEEDL	NKAPL	246	Q5M9Q1
SDIKCKNESAASSTG	TNFRSF10D	176	Q9UBN6
NSISDTTKECDSDDN	ZNF451	1016	Q9Y4E5
TSGFEDKQSTCETKE	USP51	326	Q70EK9
LTSDGSAKNSCVSKD	ZFHX4	241	Q86UP3
CNEEEKSLSSEAFSK	UNC80	406	Q8N2C7
ASALSSQACDSKGDT	ARHGAP25	516	P42331
DSTKKEEDASSCSDK	ZBTB18	126	Q99592
DTSMETACGDSKDND	TENM4	831	Q6N022
SSKKADSCTNSEGSS	TCF20	491	Q9UGU0
EASDKSCEASDKSCS	ZNF655	271	Q8N720
KDSTSVQDFSKAESC	ZNF286B	121	P0CG31
GSSVKSVCKNTGDDE	USP31	1256	Q70CQ4
AEDSQKSSGANTSKD	TGS1	386	Q96RS0
KSEEGKLSTSQDAAC	PPP6R3	816	Q5H9R7
VGDSSASKEQCKENT	ZZZ3	321	Q8IYH5
QASSGENSTKLDECK	nan	116	Q499Y3
DKNSVLSGSSKSEDC	HIVEP1	1541	P15822
NSDGSAKSSCVSKDV	ZFHX3	246	Q15911
AAEDCNKSKSNSAAD	VAX1	56	Q5SQQ9